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2024-04-24 21:04:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_004259841             747 bp    mRNA    linear   INV 27-MAR-2013
DEFINITION  Entamoeba invadens IP1 homeobox protein knotted-1, putative
            (EIN_053630) mRNA, complete cds.
ACCESSION   XM_004259841
VERSION     XM_004259841.1
KEYWORDS    RefSeq.
SOURCE      Entamoeba invadens IP1
  ORGANISM  Entamoeba invadens IP1
            Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida;
            Entamoebidae; Entamoeba.
REFERENCE   1  (bases 1 to 747)
  AUTHORS   Zafar,N., Inman,J., Hall,N., Lorenzi,H. and Caler,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (24-OCT-2012) J. Craig Venter Institute, 9704 Medical
            Center Drive, Rockville, MD 20850, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_004443648).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..747
                     /organism="Entamoeba invadens IP1"
                     /mol_type="mRNA"
                     /strain="IP1"
                     /host="green water snake"
                     /db_xref="taxon:370355"
                     /chromosome="Unknown"
                     /country="USA"
                     /collection_date="1952"
     gene            <1..>747
                     /locus_tag="EIN_053630"
                     /db_xref="GeneID:14892326"
     CDS             1..747
                     /locus_tag="EIN_053630"
                     /note="encoded by transcript EIN_053630A"
                     /codon_start=1
                     /product="homeobox protein knotted-1, putative"
                     /protein_id="XP_004259889.1"
                     /db_xref="GeneID:14892326"
                     /translation="
MEPTQEVQKVLTECVNKTIDFDQYLKCFEQSLVRPSGDISDQSLMEKVQHVADLVTGEKLLRLNELVQIFNSQAEVLYLYYTSYYTQLVSLLDSQSQKRIVTQDERSYKISCLRALFGNIYSHLKLMFGSNVSSLAPRERKIPTFLSPQISVHSITSQSQPLSKITCKNSLVLSSTKPTKPIFKIDKIKTQSPKTQKIKPLLDWFVLHSNHPYPTEEQKERLGSECGMSPKQVGTWFSNKRNRNKNQN"
     misc_feature    613..711
                     /locus_tag="EIN_053630"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
atggaaccaactcaggaagttcaaaaagtgcttactgagtgcgtcaataagactatcgacttcgaccaatatttaaaatgcttcgagcagtcgttggttcgaccaagtggagacatctcagatcagtcattgatggagaaagttcaacacgttgcagatctcgtgactggagagaagttgttgcgcctcaacgaattagtccaaattttcaactcacaggcagaagtgctttatctgtattacacaagttattatactcaacttgtctcacttcttgattcgcagtcccaaaaaaggatagtgacacaagacgaacgaagttataaaatatcatgtcttcgagctctttttggaaatatttattcacacctaaaactcatgtttggctcaaatgtttcgagtttggcgcctcgggaacgcaaaatccccacttttttatccccccaaatatctgttcattccatcacttctcaatctcaaccattgtcaaaaatcacttgcaaaaattctcttgtattgtcatcgacaaagccaacaaaaccaattttcaagattgacaagataaaaactcaaagtcctaaaacccaaaaaatcaaacctcttcttgactggtttgtccttcactcaaatcatccatatccaactgaagaacaaaaagaacgtcttgggtccgagtgtgggatgtctcccaaacaggttggtacttggttctcgaacaaaagaaacagaaacaagaaccaaaactaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]