LOCUS       XM_003786784            1917 bp    mRNA    linear   PRI 12-JAN-2018
DEFINITION  PREDICTED: Otolemur garnettii vimentin (VIM), mRNA.
ACCESSION   XM_003786784
VERSION     XM_003786784.3
DBLINK      BioProject: PRJNA169348
KEYWORDS    RefSeq.
SOURCE      Otolemur garnettii (small-eared galago)
  ORGANISM  Otolemur garnettii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini;
            Lorisiformes; Galagidae; Otolemur.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_003852414.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 12, 2018 this sequence version replaced XM_003786784.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Otolemur garnettii Annotation
                                           Release 102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1917
                     /organism="Otolemur garnettii"
                     /mol_type="mRNA"
                     /isolate="467f Iridium"
                     /db_xref="taxon:30611"
                     /chromosome="Unknown"
                     /sex="female"
                     /country="USA: Duke University Primate Center, Durham, NC"
     gene            1..1917
                     /gene="VIM"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 14 mRNAs, 12130 ESTs, 33 Proteins,
                     and 97% coverage of the annotated genomic feature by
                     RNAseq alignments, including 7 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:100950506"
     CDS             194..1594
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_003786832.1"
                     /db_xref="GeneID:100950506"
                     /translation="

MSTRSVSSSSYRRMFGGPGTASRPSSNRSYVTTSTRTYSLGSALRPSTSRSLYSSSPGGAYVTRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLTEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFASLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     misc_feature    233..496
                     /gene="VIM"
                     /note="Intermediate filament head (DNA binding) region;
                     Region: Filament_head; pfam04732"
                     /db_xref="CDD:428095"
     misc_feature    497..1423
                     /gene="VIM"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

ctttctagccagattatatataaacagcgcctttggcggggtcccgtcctctgccactctcgctccggggtcccagcgccagagacacagcagcgctcccaccgcccacacccgccgcgccctagctcgcctcacctcccggagcccgttcgcaccgctgcagctgcccagcccaccaccatcctctgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggtggccccggcaccgcgagccggccgagctccaaccggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcctctactcctcgtccccaggcggcgcgtatgtcacccgttcctcggccgtgcgcctgcggagcagcgtgcccggcgtgcggctgctgcaggactccgtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgataaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctgaccgaggacatcatgaggctccgggagaaattacaggaggagatgcttcagagggaggaagctgagagcaccctgcaatcgttcagacaggatgttgacaatgcatctttggcacgtctggaccttgaacgtaaagtggaatccttgcaagaagagatcgccttcctgaagaaactgcacgatgaggaaatccaggagctgcaggcccagattcaggaccaacatgtccaaatcgacatggatgtttccaaacctgacctcacggctgccctgcgtgacgtgcgtcagcaatatgaaagtgtggctgccaagaaccttcaggaggcagaagaatggtacaagtccaagtttgcggacctctctgaggctgctaaccggaacaatgatgccttgcgccaagcgaagcaggaatccaatgagtaccggagacaggtgcagtccctcacctgcgaagtggatgcccttaaaggaactaacgagtccctggaacgccagatgcgtgaaatggaagagaactttgctgtcgaagctgctaactaccaagacactattggccgcttgcaggatgagattcagaacatgaaggaagaaatggcccgtcaccttcgtgaataccaagacctgctcaatgttaagatggctcttgacattgagatcgccacctacaggaagctgctggaaggggaggaaagcaggatttccctgcctcttccaaactttgcctccctgaacctgagagaaaccaatctggattcactccctctggtggacacccactcaaagaggacccttctgattaagaccgttgaaactagagatggacaggttatcaatgaaacttctcagcatcacgatgatcttgaatagaaattgcacacactcagtgcagcaatatattaccagcaagaataaaaaagcaatgtgtatcctataggaacatcttccaagtgcctttctgcagtttttcaggagcgcaagatagattttgaatagctataagctctagttcttaaccaccaacactcctaaaagatttagaaaaaaacgtttacaccataatctagtttatgaagaagtcttgtgctagaatactttttaaaaagtatttttgaataccattaaaactgcttttttccccatgaagtattcaatctactgggttctgcttcaataaatctttggtaaaactc

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