GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-07-23 22:51:27, GGRNA.v2 : RefSeq release 224 (May, 2024)

LOCUS       NR_074234               1475 bp    rRNA    linear   BCT 12-MAR-2019
DEFINITION  Porphyromonas gingivalis ATCC 33277 16S ribosomal RNA, partial
            sequence.
ACCESSION   NR_074234
VERSION     NR_074234.1
DBLINK      Project: 33175
            BioProject: PRJNA33175
KEYWORDS    RefSeq.
SOURCE      Porphyromonas gingivalis ATCC 33277
  ORGANISM  Porphyromonas gingivalis ATCC 33277
            Bacteria; Bacteroidota; Bacteroidia; Bacteroidales;
            Porphyromonadaceae; Porphyromonas.
REFERENCE   1
  AUTHORS   Naito,M., Hirakawa,H., Yamashita,A., Ohara,N., Shoji,M.,
            Yukitake,H., Nakayama,K., Toh,H., Yoshimura,F., Kuhara,S.,
            Hattori,M., Hayashi,T. and Nakayama,K.
  TITLE     Determination of the genome sequence of Porphyromonas gingivalis
            strain ATCC 33277 and genomic comparison with strain W83 revealed
            extensive genome rearrangements in P. gingivalis
  JOURNAL   DNA Res. 15 (4), 215-225 (2008)
   PUBMED   18524787
REFERENCE   2  (bases 1 to 1475)
  CONSRTM   NCBI RefSeq Targeted Loci Project
  TITLE     Direct Submission
  JOURNAL   Submitted (28-JAN-2013) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1475)
  AUTHORS   Hattori,M., Yamashita,A., Toh,H., Oshima,K. and Shiba,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-APR-2007) Contact:Masahira Hattori University of
            Tokyo, Graduate School of Frontier Sciences; 5-1-5 Kashiwanoha,
            Kashiwa, Chiba 277-8562, Japan URL
            :http://www.cb.k.u-tokyo.ac.jp/hattorilab/
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence is identical to AP009380:229311-230785.
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Porphyromonas gingivalis ATCC 33277"
                     /mol_type="rRNA"
                     /strain="ATCC 33277"
                     /culture_collection="ATCC:33277"
                     /type_material="type strain of Bacteroides gingivalis"
                     /db_xref="taxon:431947"
     rRNA            <1..>1475
                     /product="16S ribosomal RNA"
ORIGIN      
acagtggagagtttgatcctggctcaggatgaacgctagcgataggcttaacacatgcaagtcgaggggcagcatgatcttagcttgctaaggttgatggcgaccggcgcacgggtgcgtaacgcgtatgcaacttgccttacagagggggataacccgttgaaagacggactaaaaccgcatacacttgtattattgcatgatattacaaggaaatatttatagctgtaagataggcatgcgtcccattagctagttggtgaggtaacggctcaccaaggcgacgatgggtaggggaactgagaggtttatcccccacactggtactgagacacggaccagactcctacgggaggcagcagtgaggaatattggtcaatgggcgagagcctgaaccagccaagtcgcgtgaaggaagactgtcctaaggattgtaaacttcttttatacgggaataacgggcgatacgagtattgcattgaatgtaccgtaagaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcgagcgttatccggatttattgggtttaaagggtgcgtaggttgttcggtaagtcagcggtgaaacctgagcgctcaacgttcagcctgccgttgaaactgccgggcttgagttcagcggcggcaggcggaattcgtggtgtagcggtgaaatgcatagatatcacgaggaactccgattgcgaaggcagcttgccatactgcgactgacactgaagcacgaaggcgtgggtatcaaacaggattagataccctggtagtccacgcagtaaacgatgattactaggagtttgcgatataccgtcaagcttccacagcgaaagcgttaagtaatccacctggggagtacgccggcaacggtgaaactcaaaggaattgacgggggcccgcacaagcggaggaacatgtggtttaattcgatgatacgcgaggaaccttacccgggattgaaatgtagatgactgatggtgaaaaccgtcttcccttcggggcttctatgtaggtgctgcatggttgtcgtcagctcgtgccgtgaggtgtcggcttaagtgccataacgagcgcaacccacatcggtagttgctaacagttttcgctgaggactctaccgagactgccgtcgtaaggcgtgaggaaggtgtggatgacgtcaaatcagcacggcccttacatccggggcgacacacgtgttacaatgggagggacaaagggcagctaccgggcgaccggatgcgaatctctaaacccttccccagttcggatcggagtctgcaactcgactccgtgaagctggattcgctagtaatcgcgcatcagccatggcgcggtgaatacgttcccgggccttgtacacaccgcccgtcaagccatgggagtcgggggtacctgaagggcgtaaccgcaaggggcgcactagggtaataccggtgact
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]