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Previous release (v1)
2025-12-13 01:53:52, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS NR_030449 87 bp RNA linear ROD 06-AUG-2023
DEFINITION Mus musculus microRNA 680-3 (Mir680-3), microRNA.
ACCESSION NR_030449
VERSION NR_030449.1
KEYWORDS RefSeq.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 87)
AUTHORS Tarantino C, Paolella G, Cozzuto L, Minopoli G, Pastore L, Parisi S
and Russo T.
TITLE miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic
stem cells
JOURNAL FASEB J 24 (9), 3255-3263 (2010)
PUBMED 20439489
REFERENCE 2 (bases 1 to 87)
AUTHORS Aoi W, Naito Y, Mizushima K, Takanami Y, Kawai Y, Ichikawa H and
Yoshikawa T.
TITLE The microRNA miR-696 regulates PGC-1{alpha} in mouse skeletal
muscle in response to physical activity
JOURNAL Am J Physiol Endocrinol Metab 298 (4), E799-E806 (2010)
PUBMED 20086200
REFERENCE 3 (bases 1 to 87)
AUTHORS Mineno J, Okamoto S, Ando T, Sato M, Chono H, Izu H, Takayama M,
Asada K, Mirochnitchenko O, Inouye M and Kato I.
TITLE The expression profile of microRNAs in mouse embryos
JOURNAL Nucleic Acids Res 34 (6), 1765-1771 (2006)
PUBMED 16582102
REMARK Publication Status: Online-Only
REFERENCE 4 (bases 1 to 87)
AUTHORS Griffiths-Jones S, Grocock RJ, van Dongen S, Bateman A and Enright
AJ.
TITLE miRBase: microRNA sequences, targets and gene nomenclature
JOURNAL Nucleic Acids Res 34 (Database issue), D140-D144 (2006)
PUBMED 16381832
COMMENT PROVISIONAL REFSEQ: This record is based on preliminary annotation
provided by NCBI staff in collaboration with miRBase. The reference
sequence was derived from AC122314.4.
Summary: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs
that are involved in post-transcriptional regulation of gene
expression in multicellular organisms by affecting both the
stability and translation of mRNAs. miRNAs are transcribed by RNA
polymerase II as part of capped and polyadenylated primary
transcripts (pri-miRNAs) that can be either protein-coding or
non-coding. The primary transcript is cleaved by the Drosha
ribonuclease III enzyme to produce an approximately 70-nt stem-loop
precursor miRNA (pre-miRNA), which is further cleaved by the
cytoplasmic Dicer ribonuclease to generate the mature miRNA and
antisense miRNA star (miRNA*) products. The mature miRNA is
incorporated into a RNA-induced silencing complex (RISC), which
recognizes target mRNAs through imperfect base pairing with the
miRNA and most commonly results in translational inhibition or
destabilization of the target mRNA. The RefSeq represents the
predicted microRNA stem-loop. [provided by RefSeq, Sep 2009].
Sequence Note: This record represents a predicted microRNA
stem-loop as defined by miRBase. Some sequence at the 5' and 3'
ends may not be included in the intermediate precursor miRNA
produced by Drosha cleavage.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-87 AC122314.4 79836-79922
FEATURES Location/Qualifiers
source 1..87
/organism="Mus musculus"
/mol_type="transcribed RNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/chromosome="12"
/map="12 15.71 cM"
gene 1..87
/gene="Mir680-3"
/gene_synonym="Mirn680-3"
/note="microRNA 680-3"
/db_xref="GeneID:751520"
/db_xref="MGI:MGI:3629889"
/db_xref="miRBase:MI0004642"
precursor_RNA 1..87
/gene="Mir680-3"
/gene_synonym="Mirn680-3"
/product="microRNA 680-3"
/db_xref="GeneID:751520"
/db_xref="MGI:MGI:3629889"
/db_xref="miRBase:MI0004642"
exon 1..87
/gene="Mir680-3"
/gene_synonym="Mirn680-3"
/inference="alignment:Splign:2.1.0"
ncRNA 29..49
/ncRNA_class="miRNA"
/gene="Mir680-3"
/gene_synonym="Mirn680-3"
/product="mmu-miR-680"
/db_xref="miRBase:MIMAT0003457"
/db_xref="GeneID:751520"
/db_xref="MGI:MGI:3629889"
/db_xref="miRBase:MI0004642"
ORIGIN
gggggatttaacaaagaacaaaaaaggtgggcatctgctgacatgggggcagaagtcaggctctaggcagcaggtactcttcatctt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]