2024-12-03 09:16:26, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001413743 5234 bp mRNA linear PRI 10-APR-2024 DEFINITION Homo sapiens polyhomeotic homolog 1 (PHC1), transcript variant 7, mRNA. ACCESSION NM_001413743 VERSION NM_001413743.1 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5234) AUTHORS Chen,L., Tong,Q., Chen,X., Jiang,P., Yu,H., Zhao,Q., Sun,L., Liu,C., Gu,B., Zheng,Y., Fei,L., Jiang,X., Li,W., Volpe,G., Abdul,M.M., Guo,G., Zhang,J., Qian,P., Sun,Q., Neculai,D., Esteban,M.A., Li,C., Wen,F. and Ji,J. TITLE PHC1 maintains pluripotency by organizing genome-wide chromatin interactions of the Nanog locus JOURNAL Nat Commun 12 (1), 2829 (2021) PUBMED 33990559 REMARK GeneRIF: PHC1 maintains pluripotency by organizing genome-wide chromatin interactions of the Nanog locus. Publication Status: Online-Only REFERENCE 2 (bases 1 to 5234) AUTHORS Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W., Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B., Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A., Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A., Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C., Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M., Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G., Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S., Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A., Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S., Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N., Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A., Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M., Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J., Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P., Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J., Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A. TITLE A reference map of the human binary protein interactome JOURNAL Nature 580 (7803), 402-408 (2020) PUBMED 32296183 REFERENCE 3 (bases 1 to 5234) AUTHORS Huttlin,E.L., Bruckner,R.J., Paulo,J.A., Cannon,J.R., Ting,L., Baltier,K., Colby,G., Gebreab,F., Gygi,M.P., Parzen,H., Szpyt,J., Tam,S., Zarraga,G., Pontano-Vaites,L., Swarup,S., White,A.E., Schweppe,D.K., Rad,R., Erickson,B.K., Obar,R.A., Guruharsha,K.G., Li,K., Artavanis-Tsakonas,S., Gygi,S.P. and Harper,J.W. TITLE Architecture of the human interactome defines protein communities and disease networks JOURNAL Nature 545 (7655), 505-509 (2017) PUBMED 28514442 REFERENCE 4 (bases 1 to 5234) AUTHORS Hauri,S., Comoglio,F., Seimiya,M., Gerstung,M., Glatter,T., Hansen,K., Aebersold,R., Paro,R., Gstaiger,M. and Beisel,C. TITLE A High-Density Map for Navigating the Human Polycomb Complexome JOURNAL Cell Rep 17 (2), 583-595 (2016) PUBMED 27705803 REFERENCE 5 (bases 1 to 5234) AUTHORS Willer,C.J., Schmidt,E.M., Sengupta,S., Peloso,G.M., Gustafsson,S., Kanoni,S., Ganna,A., Chen,J., Buchkovich,M.L., Mora,S., Beckmann,J.S., Bragg-Gresham,J.L., Chang,H.Y., Demirkan,A., Den Hertog,H.M., Do,R., Donnelly,L.A., Ehret,G.B., Esko,T., Feitosa,M.F., Ferreira,T., Fischer,K., Fontanillas,P., Fraser,R.M., Freitag,D.F., Gurdasani,D., Heikkila,K., Hypponen,E., Isaacs,A., Jackson,A.U., Johansson,A., Johnson,T., Kaakinen,M., Kettunen,J., Kleber,M.E., Li,X., Luan,J., Lyytikainen,L.P., Magnusson,P.K.E., Mangino,M., Mihailov,E., Montasser,M.E., Muller-Nurasyid,M., Nolte,I.M., O'Connell,J.R., Palmer,C.D., Perola,M., Petersen,A.K., Sanna,S., Saxena,R., Service,S.K., Shah,S., Shungin,D., Sidore,C., Song,C., Strawbridge,R.J., Surakka,I., Tanaka,T., Teslovich,T.M., Thorleifsson,G., Van den Herik,E.G., Voight,B.F., Volcik,K.A., Waite,L.L., Wong,A., Wu,Y., Zhang,W., Absher,D., Asiki,G., Barroso,I., Been,L.F., Bolton,J.L., Bonnycastle,L.L., Brambilla,P., Burnett,M.S., Cesana,G., Dimitriou,M., Doney,A.S.F., Doring,A., Elliott,P., Epstein,S.E., Ingi Eyjolfsson,G., Gigante,B., Goodarzi,M.O., Grallert,H., Gravito,M.L., Groves,C.J., Hallmans,G., Hartikainen,A.L., Hayward,C., Hernandez,D., Hicks,A.A., Holm,H., Hung,Y.J., Illig,T., Jones,M.R., Kaleebu,P., Kastelein,J.J.P., Khaw,K.T., Kim,E., Klopp,N., Komulainen,P., Kumari,M., Langenberg,C., Lehtimaki,T., Lin,S.Y., Lindstrom,J., Loos,R.J.F., Mach,F., McArdle,W.L., Meisinger,C., Mitchell,B.D., Muller,G., Nagaraja,R., Narisu,N., Nieminen,T.V.M., Nsubuga,R.N., Olafsson,I., Ong,K.K., Palotie,A., Papamarkou,T., Pomilla,C., Pouta,A., Rader,D.J., Reilly,M.P., Ridker,P.M., Rivadeneira,F., Rudan,I., Ruokonen,A., Samani,N., Scharnagl,H., Seeley,J., Silander,K., Stancakova,A., Stirrups,K., Swift,A.J., Tiret,L., Uitterlinden,A.G., van Pelt,L.J., Vedantam,S., Wainwright,N., Wijmenga,C., Wild,S.H., Willemsen,G., Wilsgaard,T., Wilson,J.F., Young,E.H., Zhao,J.H., Adair,L.S., Arveiler,D., Assimes,T.L., Bandinelli,S., Bennett,F., Bochud,M., Boehm,B.O., Boomsma,D.I., Borecki,I.B., Bornstein,S.R., Bovet,P., Burnier,M., Campbell,H., Chakravarti,A., Chambers,J.C., Chen,Y.I., Collins,F.S., Cooper,R.S., Danesh,J., Dedoussis,G., de Faire,U., Feranil,A.B., Ferrieres,J., Ferrucci,L., Freimer,N.B., Gieger,C., Groop,L.C., Gudnason,V., Gyllensten,U., Hamsten,A., Harris,T.B., Hingorani,A., Hirschhorn,J.N., Hofman,A., Hovingh,G.K., Hsiung,C.A., Humphries,S.E., Hunt,S.C., Hveem,K., Iribarren,C., Jarvelin,M.R., Jula,A., Kahonen,M., Kaprio,J., Kesaniemi,A., Kivimaki,M., Kooner,J.S., Koudstaal,P.J., Krauss,R.M., Kuh,D., Kuusisto,J., Kyvik,K.O., Laakso,M., Lakka,T.A., Lind,L., Lindgren,C.M., Martin,N.G., Marz,W., McCarthy,M.I., McKenzie,C.A., Meneton,P., Metspalu,A., Moilanen,L., Morris,A.D., Munroe,P.B., Njolstad,I., Pedersen,N.L., Power,C., Pramstaller,P.P., Price,J.F., Psaty,B.M., Quertermous,T., Rauramaa,R., Saleheen,D., Salomaa,V., Sanghera,D.K., Saramies,J., Schwarz,P.E.H., Sheu,W.H., Shuldiner,A.R., Siegbahn,A., Spector,T.D., Stefansson,K., Strachan,D.P., Tayo,B.O., Tremoli,E., Tuomilehto,J., Uusitupa,M., van Duijn,C.M., Vollenweider,P., Wallentin,L., Wareham,N.J., Whitfield,J.B., Wolffenbuttel,B.H.R., Ordovas,J.M., Boerwinkle,E., Palmer,C.N.A., Thorsteinsdottir,U., Chasman,D.I., Rotter,J.I., Franks,P.W., Ripatti,S., Cupples,L.A., Sandhu,M.S., Rich,S.S., Boehnke,M., Deloukas,P., Kathiresan,S., Mohlke,K.L., Ingelsson,E. and Abecasis,G.R. CONSRTM Global Lipids Genetics Consortium TITLE Discovery and refinement of loci associated with lipid levels JOURNAL Nat Genet 45 (11), 1274-1283 (2013) PUBMED 24097068 REFERENCE 6 (bases 1 to 5234) AUTHORS Levine,S.S., Weiss,A., Erdjument-Bromage,H., Shao,Z., Tempst,P. and Kingston,R.E. TITLE The core of the polycomb repressive complex is compositionally and functionally conserved in flies and humans JOURNAL Mol Cell Biol 22 (17), 6070-6078 (2002) PUBMED 12167701 REFERENCE 7 (bases 1 to 5234) AUTHORS Ohta,H., Tokimasa,S., Zou,Z., Funaki,S., Kurahashi,H., Takahashi,Y., Kimura,M., Matsuoka,R., Horie,M., Hara,J., Shimada,K. and Takihara,Y. TITLE Structure and chromosomal localization of the RAE28/HPH1 gene, a human homologue of the polyhomeotic gene JOURNAL DNA Seq 11 (1-2), 61-73 (2000) PUBMED 10902910 REFERENCE 8 (bases 1 to 5234) AUTHORS Satijn,D.P., Gunster,M.J., van der Vlag,J., Hamer,K.M., Schul,W., Alkema,M.J., Saurin,A.J., Freemont,P.S., van Driel,R. and Otte,A.P. TITLE RING1 is associated with the polycomb group protein complex and acts as a transcriptional repressor JOURNAL Mol Cell Biol 17 (7), 4105-4113 (1997) PUBMED 9199346 REFERENCE 9 (bases 1 to 5234) AUTHORS Gunster,M.J., Satijn,D.P., Hamer,K.M., den Blaauwen,J.L., de Bruijn,D., Alkema,M.J., van Lohuizen,M., van Driel,R. and Otte,A.P. TITLE Identification and characterization of interactions between the vertebrate polycomb-group protein BMI1 and human homologs of polyhomeotic JOURNAL Mol Cell Biol 17 (4), 2326-2335 (1997) PUBMED 9121482 REFERENCE 10 (bases 1 to 5234) AUTHORS Verloes,A., Drunat,S., Gressens,P. and Passemard,S. TITLE Primary Autosomal Recessive Microcephalies and Seckel Syndrome Spectrum Disorders - RETIRED CHAPTER, FOR HISTORICAL REFERENCE ONLY JOURNAL (in) Adam MP, Feldman J, Mirzaa GM, Pagon RA, Wallace SE, Bean LJH, Gripp KW and Amemiya A (Eds.); GENEREVIEWS(R); (1993) PUBMED 20301772 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AC006581.16. Summary: This gene is a homolog of the Drosophila polyhomeotic gene, which is a member of the Polycomb group of genes. The gene product is a component of a multimeric protein complex that contains EDR2 and the vertebrate Polycomb protein BMH1. The gene product, the EDR2 protein, and the Drosophila polyhomeotic protein share 2 highly conserved domains, named homology domains I and II. These domains are involved in protein-protein interactions and may mediate heterodimerization of the protein encoded by this gene and the EDR2 protein. [provided by RefSeq, Jul 2008]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: SRR18074967.714377.1, SRR18074969.1970718.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA1965299, SAMEA1968540 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-319 AC006581.16 63466-63784 320-481 AC006581.16 66587-66748 482-592 AC006581.16 68713-68823 593-673 AC006581.16 69942-70022 674-823 AC006581.16 71596-71745 824-1316 AC006581.16 79392-79884 1317-2104 AC006581.16 81520-82307 2105-2252 AC006581.16 82822-82969 2253-2464 AC006581.16 83224-83435 2465-2579 AC006581.16 84081-84195 2580-2688 AC006581.16 85813-85921 2689-2839 AC006581.16 86133-86283 2840-3071 AC006581.16 86786-87017 3072-5234 AC006581.16 88262-90424 FEATURES Location/Qualifiers source 1..5234 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="12" /map="12p13.31" gene 1..5234 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="polyhomeotic homolog 1" /db_xref="GeneID:1911" /db_xref="HGNC:HGNC:3182" /db_xref="MIM:602978" exon 1..319 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" misc_feature 89..91 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="upstream in-frame stop codon" exon 320..481 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" CDS 368..3226 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="isoform f is encoded by transcript variant 7; early development regulator 1 (homolog of polyhomeotic 1); early development regulatory protein 1; polyhomeotic-like 1" /codon_start=1 /product="polyhomeotic-like protein 1 isoform f" /protein_id="NP_001400672.1" /db_xref="GeneID:1911" /db_xref="HGNC:HGNC:3182" /db_xref="MIM:602978" /translation="
METESEQNSNSTNGSSSSGGSSRPQIAQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQQLSNAQLHSLAAVQQATIAASRQASSPNTSTTQQQTTTTQASLGNLLQVNRTLGRNVPLASQLILMPNGAVAAVQQEVPSAQSPGVHADADQVQNLAVRNQQASAQGPQMQGSTQKAIPPGASPVSSLSQASSQALAVAQASSGATNQSLNLSQAGGGSGNSIPGSMGPGGGGQAHGGLGQLPSSGMGGGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADGSGQQNVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQLAQQQQQQQQQQQQQQQPQATTLTAPQPPQVPPTQQVPPSQSQQQAQTLVVQPMLQSSPLSLPPDAAPKPPIPIQSKPPVAPIKPPQLGAAKMSAAQQPPPHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSGQAHLASSPPSSQAPGALQECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQSVHLPGKPQTLAVKRKADSEEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAESVANVNANTPSSELVALTPAPSVPPPTLAMVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQTGLPTGLTENQSGGPLGVDSPSAELDKKANLLKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEANYARVRRRGPRRSSSDIARAKIQGKCHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRAGHGERDLGNPNTAPPTPELHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET"
misc_feature <1631..2221 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 2693..3016 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="Unstructured region on Polyhomeotic-like protein 1 and 2; Region: PHC2_SAM_assoc; pfam16616" /db_xref="CDD:465202" misc_feature 3014..3220 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="SAM domain of Ph (polyhomeotic) proteins of Polycomb group; Region: SAM_Ph1,2,3; cd09577" /db_xref="CDD:188976" misc_feature order(3068..3073,3173..3178,3185..3190,3197..3199) /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="oligomer interface EH [polypeptide binding]; other site" /db_xref="CDD:188976" misc_feature order(3101..3115,3119..3124,3131..3136,3146..3148, 3161..3163) /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="oligomer interface ML [polypeptide binding]; other site" /db_xref="CDD:188976" exon 482..592 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 593..673 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 674..823 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 824..1316 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 1317..2104 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2105..2252 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2253..2464 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2465..2579 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2580..2688 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2689..2839 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 2840..3071 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" exon 3072..5234 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /inference="alignment:Splign:2.1.0" regulatory 5213..5218 /regulatory_class="polyA_signal_sequence" /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="hexamer: AAGAAA" polyA_site 5234 /gene="PHC1" /gene_synonym="EDR1; HPH1; MCPH11; RAE28" /note="major polyA site" ORIGIN
agcccggcccgcagcccctggcctgcggcccccaccttctcggccgggcaggaagtgacaggcccggagcgagccccggaggcctggctgagccgcggccgggcccgcacccggagcggcgggaggggcggggagccgcggtcgcgccgggcgcctcccaccccgccctcggcgcccccgcccctccaggaaggggaggaggcgaggggagcccgccgcggaggccgagcgagcccccagcccagcctggcgactggggaccccggcacatgaggtggacgcccccggggaagacttgggtgcacagccaggcgagaaggtcttgagtcagacagagcaccagccttggggaccctggaccactatcatggagactgagagcgagcagaactccaattccaccaatgggagttctagctcagggggcagctctcggccccagatagctcaaatgtcactttatgaacgacaagcagtgcaggctctgcaagcactgcagcggcagcccaatgcagctcagtatttccaccagttcatgctccagcagcagctcagtaatgcccagctgcatagcctggctgccgtccagcaggccacaattgctgccagtcggcaggccagctccccaaacaccagcactacacagcagcagactaccaccacccaggcctcgctgggaaacctattgcaggtaaaccgaaccctgggtcggaatgtgcctctagcctcccaactcatcctgatgcctaatggggcggtggctgcagtccagcaggaggtgccatctgctcagtctcctggagttcatgcagatgcagatcaggttcagaacttggcagtaaggaatcaacaggcctcagctcaaggacctcagatgcaaggctccactcagaaggccattcctccaggagcctcccctgtctctagcctctcccaggcctctagccaggccctagcggtggcacaggcttcctctggggccacaaaccagtccctcaaccttagtcaagctggtggaggcagtgggaatagcatcccagggtccatgggtccaggtggaggtgggcaggcacatggtggtttgggtcagttgccttcctcaggaatgggtggtgggagctgtcccagaaagggtacaggagtggtgcagcccttgcctgcagcccaaacagtgactgtgagccagggcagccagacagaggcagaaagtgcagcagccaagaaggcagaagcagatgggagtggccagcagaatgtgggcatgaacctgacacggacagccacacctgcgcccagccagacacttattagctcagccacctacacacagatccagccccattcactgattcagcaacagcaacagatccacctccagcagaaacaggtggtgatccagcagcagattgccatccaccaccagcagcagttccagcaccggcagtcccagctccttcacacagctacacacctccagttggcgcagcagcagcagcagcaacaacagcaacagcagcaacagcagcagccgcaagccaccaccctcactgcccctcagccaccacaggtcccacctactcagcaggtcccaccttcccagtcccagcagcaagcccaaaccctggtcgttcagcccatgcttcagtcttcacccttgtctcttccacctgatgcagcccctaagccaccaattcccatccaatccaaaccacctgtagcacctatcaagccgcctcagttaggggccgctaagatgtcagctgcccagcaaccaccaccccatatccctgtgcaagttgtaggcactcgacagccaggtacagcccaggcacaggctttggggttggcacagctggcagctgctgtacctacttcccgggggatgccaggtacagtgcagtctggtcaggcccatttggcctcctcgccaccttcatcccaggctcctggtgcactgcaggagtgccctcccacattggcccctgggatgacccttgctcctgtgcaggggacagcacatgtggtaaagggtggggctaccacctcctcacctgttgtagcccaggtccctgctgccttctatatgcagtctgtgcacttgccgggtaaaccccagacattggctgtcaaacgcaaggctgactctgaggaggagagagatgatgtctccacattgggttcaatgcttcctgccaaggcatctccagtagcagaaagcccaaaagtcatggacgagaagagcagtcttggagaaaaagctgaatcagtggctaatgtgaatgctaatactccaagcagtgaactagtagccttgacccccgccccttcagtaccgcctcctacactagccatggtgtctagacaaatgggtgactcaaaacccccacaggccatcgtgaagccccagattctcacccacatcattgaaggctttgttatccaggaaggagcagaacctttcccggtgggttgttctcagttactgaaggagtctgagaagccactacagactggccttccgacagggctgactgagaatcagtcaggtggccctttgggagtggacagcccatctgctgagttagataagaaggcgaatctcctgaagtgcgagtactgtgggaagtacgcccccgcagagcagtttcgtggctctaagaggttctgctccatgacttgcgctaagaggtacaatgtgagctgtagccatcagttccggctgaagaggaaaaaaatgaaagagtttcaagaagccaactatgctcgcgttcgcaggcgtggaccccgccgcagctcctctgacattgcccgtgccaagattcagggcaagtgccaccggggtcaagaagactctagccggggttcagataattccagttatgatgaagcactctctccaacatctcctgggcctttatcagtaagagctgggcatggagaacgtgacctggggaatcccaatacagctccacctacaccggaattacatggcatcaaccctgtgttcctgtccagtaatcccagccgttggagtgtagaggaggtgtacgagtttattgcttctctccaaggctgccaagagattgcagaggaatttcgctcacaggagattgatggacaggcccttttattacttaaagaagaacatcttatgagtgccatgaacatcaagctgggccctgccctcaagatctgcgccaagataaatgtcctcaaggagacctaaggtggccctcttgcacaaaccagcctaaggcagacactctccactgtccaggttataacctggtaccagcagactttgcagggaagaaagagttgttccaatcatgtaaccttctgtaggggattactgagacagggaagagaagtgcaagaattggttgctggtgctacatggcggcagctttgacattttctctgggttctactttattttttaaaatctttacagttctcaccatttcacgtaccttaatccaatctttataaaagaggcagtctagagaactaggactgctcagccttatcctggagtggagcatttagcccaggtcttaattctccaagaggaggaatacatagtatggtaaggcaaggaactgggtggaatgtcaggttgcctgcccaatgggagaggtagggtttttctagcttgtgtgacagaagtagcaaaatctggtcctcccccctcccagtgtagctgtggctcagagttttttctttttgttgtcacttactcccttgtgattgaattttttctcctgcatccatggcaggatccccagccagtatagagacttggttggcatcttctgctgcagggactaaaagtatttgactggggcacatgtggctgttgtcattctttctgcatcccactgttcccctccaatttatgttattttctaccctgtttttcagttccatctctgctctgtcctatagctttataaaaccagagtgtgtggggctgaggtcaggagtataagtacctgccttaggcactattccttatataacaaaaatattaaatatttttttcctcagtaaaaggatgaaaattggtttcagttgtcttactctattccagtctttgcccactttcacacaaatgacaaggccaatatgttttgtttgttttttaatcattaagagtttttgtacaaaaggtgatggttttttttcttcattttaaaacaccagggtgtgggggagggatgcaaacaaataacaaaaaagatgcttttgtaacattattttccctgtttagaaagaaaaaaatcactccaatagtattgaaaagtccaaagatgaaatagtttcattttcttttcctaaggcttataaaaggccccctgcctgttgattccatccctcttttgtgtccagtggagccatgttactcttcagtggcccaggggttcactattaaagaaagatcagtccaggtttctgggcacatggcctaaacaggaagatggaagcatcagaggattaaaaacctttccccacagaaatgtgggcaagaagacacttccctgagccagcagaagggacaggtgcagcagcattccacacccagcgcagaggacagcagagccctcgatgtcccacttctgcttccgttccctttctagaagattgaaaaaaaggtcaaaaccacatgcctgtggagaaagtgcgacatgtttagaaatactggtagggaaccaggagtaagaaaagctttaccagcttttactacaaatggatgaaagacatcaggatcccaccaccgcaaggtaaagtgacttcccttttctggaacccctgtggcacaggagtaccaattttcctttccaacgaactggatttctggataggcattttggctgtatgtggacagataagaccacagtccttagcccaatcccagctatacagtcaccccaatttccacaaatgatgtgatggtaccgtataatcctgtaattgggaaatttcacatttttcctgtcctaatctcagaggtgggagaagcaagtctagaacatctccaggctcagactaaacgagagtacttggactgcaaccaagtaatcactgcaaagtagttccaagcagcaagaaataccagattctcatggaggctactatagggtacagaataacaacatgaaagcaatcaaccctgtataaataatgtttcttggcattttttttttaattaaagaaatccagtgtctcaaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]