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Previous release (v1)
2025-02-22 14:39:14, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS NM_001290997 6167 bp mRNA linear ROD 29-OCT-2024
DEFINITION Mus musculus sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6D (Sema6d), transcript variant 3,
mRNA.
ACCESSION NM_001290997
VERSION NM_001290997.2
KEYWORDS RefSeq.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 6167)
AUTHORS Thowfeequ,S., Fiorentino,J., Hu,D., Solovey,M., Ruane,S.,
Whitehead,M., Zhou,F., Godwin,J., Mateo-Otero,Y.,
Vanhaesebroeck,B., Scialdone,A. and Srinivas,S.
TITLE An integrated approach identifies the molecular underpinnings of
murine anterior visceral endoderm migration
JOURNAL Dev Cell 59 (17), 2347-2363 (2024)
PUBMED 38843837
REFERENCE 2 (bases 1 to 6167)
AUTHORS Nakanishi,Y., Izumi,M., Matsushita,H., Koyama,Y., Diez,D.,
Takamatsu,H., Koyama,S., Nishide,M., Naito,M., Mizuno,Y.,
Yamaguchi,Y., Mae,T., Noda,Y., Nakaya,K., Nojima,S., Sugihara,F.,
Okuzaki,D., Ikawa,M., Shimada,S., Kang,S. and Kumanogoh,A.
TITLE Semaphorin 6D tunes amygdalar circuits for emotional, metabolic,
and inflammatory outputs
JOURNAL Neuron 112 (17), 2955-2972 (2024)
PUBMED 39002542
REMARK GeneRIF: Semaphorin 6D tunes amygdalar circuits for emotional,
metabolic, and inflammatory outputs.
REFERENCE 3 (bases 1 to 6167)
AUTHORS Hirai,T., Naito,Y., Koyama,S., Nakanishi,Y., Masuhiro,K., Izumi,M.,
Kuge,T., Naito,M., Mizuno,Y., Yamaguchi,Y., Kang,S., Yaga,M.,
Futami,Y., Nojima,S., Nishide,M., Morita,T., Kato,Y., Tsuda,T.,
Takemoto,N., Kinugasa-Katayama,Y., Aoshi,T., Villa,J.K.,
Yamashita,K., Enokida,T., Hoshi,Y., Matsuura,K., Tahara,M.,
Takamatsu,H., Takeda,Y., Inohara,H. and Kumanogoh,A.
TITLE Sema6D forward signaling impairs T cell activation and
proliferation in head and neck cancer
JOURNAL JCI Insight 9 (3), e166349 (2024)
PUBMED 38329122
REMARK GeneRIF: Sema6D forward signaling impairs T cell activation and
proliferation in head and neck cancer.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 6167)
AUTHORS Prieur,D.S., Francius,C., Gaspar,P., Mason,C.A. and Rebsam,A.
TITLE Semaphorin-6D and Plexin-A1 Act in a Non-Cell-Autonomous Manner to
Position and Target Retinal Ganglion Cell Axons
JOURNAL J Neurosci 43 (32), 5769-5778 (2023)
PUBMED 37344233
REMARK GeneRIF: Semaphorin-6D and Plexin-A1 Act in a Non-Cell-Autonomous
Manner to Position and Target Retinal Ganglion Cell Axons.
REFERENCE 5 (bases 1 to 6167)
AUTHORS Sun,T., Zeng,H., Fan,L., Fei,J. and Chen,G.
TITLE Semaphorin 6D regulate corralling, hematoma compaction and white
matter injury in mice after intracerebral hemorrhage
JOURNAL J Stroke Cerebrovasc Dis 31 (11), 106803 (2022)
PUBMED 36174325
REMARK GeneRIF: Semaphorin 6D regulate corralling, hematoma compaction and
white matter injury in mice after intracerebral hemorrhage.
REFERENCE 6 (bases 1 to 6167)
AUTHORS Chen,B., Schaevitz,L.R. and McConnell,S.K.
TITLE Fezl regulates the differentiation and axon targeting of layer 5
subcortical projection neurons in cerebral cortex
JOURNAL Proc Natl Acad Sci U S A 102 (47), 17184-17189 (2005)
PUBMED 16284245
REFERENCE 7 (bases 1 to 6167)
AUTHORS Toyofuku,T., Zhang,H., Kumanogoh,A., Takegahara,N., Yabuki,M.,
Harada,K., Hori,M. and Kikutani,H.
TITLE Guidance of myocardial patterning in cardiac development by Sema6D
reverse signalling
JOURNAL Nat Cell Biol 6 (12), 1204-1211 (2004)
PUBMED 15543137
REMARK GeneRIF: Sema6D coordinates both compact-layer expansion and
trabeculation, functioning as both a ligand and a receptor for
Plexin-A1.
REFERENCE 8 (bases 1 to 6167)
AUTHORS Toyofuku,T., Zhang,H., Kumanogoh,A., Takegahara,N., Suto,F.,
Kamei,J., Aoki,K., Yabuki,M., Hori,M., Fujisawa,H. and Kikutani,H.
TITLE Dual roles of Sema6D in cardiac morphogenesis through
region-specific association of its receptor, Plexin-A1, with
off-track and vascular endothelial growth factor receptor type 2
JOURNAL Genes Dev 18 (4), 435-447 (2004)
PUBMED 14977921
REMARK GeneRIF: Plexin-S1, with Sema6D, exerts distinct biological
activities at adjacent regions, crucial for complex cardiac
morphogenesis.
REFERENCE 9 (bases 1 to 6167)
AUTHORS Taniguchi,M. and Shimizu,T.
TITLE Characterization of a novel member of murine semaphorin family
JOURNAL Biochem Biophys Res Commun 314 (1), 242-248 (2004)
PUBMED 14715272
REFERENCE 10 (bases 1 to 6167)
AUTHORS Qu,X., Wei,H., Zhai,Y., Que,H., Chen,Q., Tang,F., Wu,Y., Xing,G.,
Zhu,Y., Liu,S., Fan,M. and He,F.
TITLE Identification, characterization, and functional study of the two
novel human members of the semaphorin gene family
JOURNAL J Biol Chem 277 (38), 35574-35585 (2002)
PUBMED 12110693
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL929570.7, AL928992.7, AL833808.4 and AL935323.6.
On May 27, 2022 this sequence version replaced NM_001290997.1.
Transcript Variant: This variant (3) differs in the 5' UTR, and
uses an alternate in-frame splice site in the central coding
region, compared to variant 1. The encoded isoform (Sema6D-2) is
shorter than isoform Sema6D-1. Both variants 2 and 3 encode isoform
Sema6D-2.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK122515.1 [ECO:0000332]
RNAseq introns :: partial sample support SAMN01164132,
SAMN01164136 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-280 AL929570.7 95682-95961
281-402 AL929570.7 148634-148755
403-483 AL928992.7 76082-76162
484-606 AL833808.4 43686-43808
607-634 AL833808.4 133428-133455
635-797 AL935323.6 40229-40391
798-909 AL935323.6 40795-40906
910-970 AL935323.6 41444-41504
971-1033 AL935323.6 41626-41688
1034-1135 AL935323.6 41801-41902
1136-1226 AL935323.6 42134-42224
1227-1346 AL935323.6 42658-42777
1347-1435 AL935323.6 43478-43566
1436-1653 AL935323.6 44292-44509
1654-1785 AL935323.6 44619-44750
1786-1941 AL935323.6 45058-45213
1942-2115 AL935323.6 45294-45467
2116-2256 AL935323.6 46216-46356
2257-2334 AL935323.6 46455-46532
2335-2396 AL935323.6 46931-46992
2397-6167 AL935323.6 50669-54439
FEATURES Location/Qualifiers
source 1..6167
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6"
/db_xref="taxon:10090"
/chromosome="2"
/map="2 60.69 cM"
gene 1..6167
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6D"
/db_xref="GeneID:214968"
/db_xref="MGI:MGI:2387661"
exon 1..280
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 281..402
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 403..483
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 484..606
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 607..634
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 635..797
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
misc_feature 653..655
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="upstream in-frame stop codon"
CDS 689..3685
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="isoform Sema6D-2 precursor is encoded by transcript
variant 3; semaphorin-6D"
/codon_start=1
/product="semaphorin-6D isoform Sema6D-2 precursor"
/protein_id="NP_001277926.1"
/db_xref="CCDS:CCDS16671.1"
/db_xref="GeneID:214968"
/db_xref="MGI:MGI:2387661"
/translation="
MGFLLLWFCVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQLMLKIRDTLYIAGRDQVYTVNLNEIPQTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHNFIKVFVPRNDEMVFVCGTNAFNPMCRYYRLRTLEYDGEEISGLARCPFDARQTNVALFADGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREIAVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSITDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPEDKVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAESEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGVCERVTLGMLPGGYEQDTEYGNTAHLGDCHGVRWEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSCTDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMAVDHRGQPPELAALPTPESTPVLHQKTLQAMKSHSEKAHSHGASRKEHPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTSFSNSNAHKAEKKLQSMDHPLTKSSSKREHRRSVDSRNTLNDLLKHLNDPNSNPKAILGEIHMAHQTLMLDPVGPMAEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY"
sig_peptide 689..748
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="COORDINATES: ab initio prediction:SignalP:6.0"
misc_feature 833..2227
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="The Sema domain, a protein interacting module, of
semaphorins and plexins; Region: Sema; cl15693"
/db_xref="CDD:472829"
misc_feature 839..841
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255; propagated from
UniProtKB/Swiss-Prot (Q76KF0.1); glycosylation site"
misc_feature 1535..1537
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255; propagated from
UniProtKB/Swiss-Prot (Q76KF0.1); glycosylation site"
misc_feature 1991..1993
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255; propagated from
UniProtKB/Swiss-Prot (Q76KF0.1); glycosylation site"
misc_feature 2069..2071
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="N-linked (GlcNAc...) asparagine.
/evidence=ECO:0000255; propagated from
UniProtKB/Swiss-Prot (Q76KF0.1); glycosylation site"
misc_feature 2228..2395
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="Plexin repeat; Region: PSI; pfam01437"
/db_xref="CDD:396154"
misc_feature <3188..3631
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="large tegument protein UL36; Provisional; Region:
PHA03247"
/db_xref="CDD:223021"
exon 798..909
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 910..970
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 971..1033
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1034..1135
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1136..1226
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1227..1346
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1347..1435
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1436..1653
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1654..1785
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1786..1941
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 1942..2115
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 2116..2256
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 2257..2334
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 2335..2396
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
exon 2397..6167
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/inference="alignment:Splign:2.1.0"
regulatory 6126..6131
/regulatory_class="polyA_signal_sequence"
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="hexamer: AATAAA"
regulatory 6143..6148
/regulatory_class="polyA_signal_sequence"
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="hexamer: ATTACA"
polyA_site 6146
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
/note="major polyA site"
polyA_site 6167
/gene="Sema6d"
/gene_synonym="1110067B02Rik; D330011G23; mKIAA1479"
ORIGIN
ggagtaaccggtgaagtgtcaaagaggcaggagtggagggctgcgggggtgacagggtgtggtctgcctggagcggcgacgtgggagagcgggacagaggcctggggctgtggatggtgccttgttgtgcctggtgcgttgacagcgcgcagctgagcggctactagggtgtcccgggctcgccaagtgcccagctccaagctgtgccagcgacctcgcgggggccccgaagctggacacctacgagtgagaaacaagaggtgctcagccttcccggcaagtgttgaaagaagcaaagaccatcaggagtaaaaaagaaacttgaaaaccagagtccatccaaagatatcaacaaaggaaactcctagaatcaaaggagagaaaggcggtgtgcagctggaggaactccaacctgagcagatgccagttgacatgggaactctgaggccagcaatttaaggattttcacgtttgcttgcagtgaatactgttggaaagtcaggccttctgcagagcagctgtctcatgaaaggaacctccatatgagacacccaaactacactccctacaacttgtgcctttgtcatgagccatgctgctaaaaatattctaccaagacagagccatctccaaggtagctaagtgggacttctgaggagggggagctcagatttcttcttggccaaccatggggttccttctgctttggttctgcgtgctgttccttctggtctccaggttacgggcggtcagcttcccagaagacgatgagcccctcaacacggttgactatcactattcaaggcaatatccggtttttagaggacgcccttcaggcaacgaatcgcagcacaggctggactttcagctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtctatacagtgaacttaaatgaaatcccccaaacagaggtgataccaagcaagaagctgacgtggaggtccagacagcaggatcgagaaaattgtgctatgaaaggcaagcataaagatgaatgccacaacttcatcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggtaccaatgctttcaacccgatgtgcagatactataggttgagaacgttagagtatgatggggaagaaattagtggcctggcacgatgcccgtttgatgcccgacaaaccaatgtcgccctctttgctgatggaaaactctattctgccacagtggctgatttcctggccagtgatgctgtcatttacagaagcatgggagatggatctgcccttcgcacaataaaatacgattccaagtggatcaaagaaccacacttccttcatgccatagaatatggaaactatgtctatttcttcttcagagaaatcgccgtggaacataataacttaggcaaggctgtgtattcccgcgtggctcgcatttgtaaaaacgacatgggtggctcacagcgggtcctggagaaacactggacttccttccttaaggctcggctgaactgctccgttcctggagattcctttttctacttcgacgtcctgcagtctataacagacataatccaaatcaatggcatccccactgtggttggggtcttcaccacacagctcaacagcattcctggttctgcagtctgtgcctttagcatggacgacattgagaaagtgttcaaagggcggttcaaagagcagaaaaccccagactctgtttggacagcagttcccgaagacaaagtaccaaaaccaaggcctggctgttgtgccaaacacggcctcgcagaagcttacaagacctccatcgactttccagatgacaccctggctttcatcaagtcccacccgctgatggactctgccgtcccacccattgccgatgagccctggttcacaaagacacgggtcaggtacaggttgacagccatcgaagtggaccgttcagcagggccataccaaaactacacagtcatctttgttggctctgaagctggcgtggtacttaaagttttggcaaagaccagtcctttctctctgaatgacagtgtattactcgaagagattgaagcttataacccagccaagtgcagcgccgagagtgaggaggacagaaaggtggtctcattacagctggacaaggatcaccatgctttatacgtggccttctctagctgcgtggtccgcatccccctcagccgctgtgagcgctacggatcgtgtaaaaagtcttgcattgcatcacgtgacccgtactgtggttggttaagccagggagtttgtgagagagtgaccctagggatgctccctggaggatatgagcaggacacggagtacggcaacacagcccacctaggggactgccacggtgtacggtgggaagtccagtctggagaatccaatcagatggtccacatgaatgtcctcatcacctgcgtgtttgccgcttttgtcttgggcgcgttcatcgcaggagtggccgtgtactgctaccgtgacatgttcgttcggaagaacagaaagatccataaagacgcagaatccgcccagtcgtgcacagactccagcggaagcttcgccaagctgaacggcctctttgacagccccgtcaaggaataccagcagaacattgattctcccaaactctacagcaacctgctgaccagtcggaaggaactgccaccaaacacggatacaaagtccatggccgtggaccacagaggccagcctcccgagctggctgctctccccacgccggaatccacacctgtcctccaccagaagaccctgcaggccatgaagagccactctgagaaggcccacagccacggtgcttcaaggaaagaacacccccagttttttccttctagtcctccaccccattccccattgagtcacgggcatatccccagtgccatcgttcttccaaacgccactcacgactacaatacatccttctccaactcgaatgcccacaaagccgaaaagaagcttcagagcatggatcaccctcttacgaagtcatccagtaagcgggagcaccggcggtctgtggattccaggaatactctcaatgatctcctgaagcatctaaatgacccaaacagtaaccccaaagccatcctgggagagatccatatggctcatcaaaccctcatgctggacccggtgggaccaatggctgaggtcccacccaaggtccctaaccgggaggcatctctatactcccctccctccacactccccagaaatagtccaaccaagagagtagatgtccccaccactcctggggtgccaatgacttctctggaaagacaaaggggttatcacaaaaattcctcccagaggcactctatatctgccgtgcctaaaaacttaaactcaccaaatggtgttttgttatctagacagccgagtatgaaccgtggaggctatatgcccaccccaacaggggcgaaggtggactatattcaggggacaccggtgagtgttcatctgcagccctccctctccagacagagcagctataccagtaatggcaccctccccaggacgggactaaagaggacaccatccttaaaacctgatgtgccaccaaagccttcctttgttccgcaaaccacatctgtcagaccactgaacaagtacacgtactaggcctcaagtatgctattcccgtgtggctttatcctgtccctgctgttgcgaggaagctgtgagggtaccttcagatgagatacctgcttgtattttaagagaaacaagtagccaaagaaactctgtcactttggtaacaccagaacttgccacatgtagctactacagcaaggcttctgtgtacttgccggaaacgaagggaggtcctgctcactccatttctttcgtttgaagcagaagggatgtgtagccagggaaggctcccttcaccagtgtaaagagctgatacagtactcagaagactgaacaaatacttgaaaatgggttcaatgtagactgccattctgtgtggtcttcccattaaatgtgaacattttaatatgtatgcattcaccttgcctcttgcacaaatgtcaaaatggaaagatgggaatgtctcaaaacaaaatgagcttggagattaccaagcagtttgctgaaaattcaatctttgacccaaactgtagcaatttttattttctgagtgtggcactgttttgttttatttttttgttttgttttgtttttcaatgccaccaacaaactatgttaagagaggggcgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagagatctacccattagaattgatttaggtgcccattgcatcttttgtactatggagttgtttacagtaagcatgactgaacaagcactaacatcctcctacaccggtccatcgtgttcggctctgatcaggaatagacaaggcttctttgactgtcaagtgattaacatatggtacccggtgtcagaacatttaagcgttctaaataattttgtgctgctatccatcagaacgtctattccagccttgccagcttaagaacttagagaaattaagaggtatctttgatgtatctaccagtattcaatagtaacatttacctgtccactgtgaatcaaagcctggggcacgctactcaaccttagacacacttacaggcttttattttgattgtgttattttattttccatacagtaaaaaatgtcctctcttaactcctctcacccccaactcccaaggcaaaagagaaaccaaaagtaggacaaaagaaagagacagacagacagacagacagaacaggaattacagttggcttagcagggaggatctgtagagctctcgatgatccttcctccatgtgtgtcctgtgaggattttgctcatgagtcatgcaggcagtgacagtgaactgtaaataccacatgtgagtttacctggatctgtgcattttgtgccttattcactcgagtggtagaagttccgcggtatgttgagtgtttccactacagagcatcatttcccatgtgccacttgtaaatgttttgcagccagcacctgaggacttcttatacagtcataaagccacctagagcgatttgttgttgagcaacgccgccccttccctccaggatcagaagcagcacccacccttgccatgataaacattccatcccctgctgttctgataatgtgaagtcagatgagggttcccaggttatgtggcacctgcggaaaccatgtctagagtcgtttctatgtagcttggcagagcccactgatggctgcaggtgtgtagcctactgacagctttggttaacccactgcacatcacccagtcatttacccaacttactctagaaatgtccacagctaaggaaggctcctgagccagtcaggcggagttcaagtgatatcttgggacagtgaccatggtctgcattacttgggggaggatggggtacaagacaccagatcatttttatacaggatgtagagtactgatgcggttgatcttttccttcaagaacattcttttctatagaaaaatgattccctgtgatcttctggaagctccaaagctgaaacccttcagctttgcaactaaaaatattacagtttaataatcaattaaaccaaccaacaataagcactacacatctgccaccaacaatgttgtttgcatttaccttaccaatattaatcccagcgtggtaactctgtgtgaccccgataacattttgtaacattgtgctgccttagagtttgtactgtgagttctatcagtatttatgttgaaatttctaacatggattctagtctctattctgttaatttaattttaaatgctttatccatttgtgcaaaggtaaacacagattgtatcttttttaatggtacggcataaaaaaataaccctaaagtgaagtggctctatactgttttatagagtactttaacgtgtatagatatcttgtaaacttgtattgtggatgtgtaaataatatgtactttgggtttttaacaccgcatgtaaagtcaaaataaaatatccaagtcattacatcctgccttttgatgttaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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