2024-03-29 21:04:43, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001266492 1050 bp mRNA linear PRI 21-FEB-2022 DEFINITION Macaca mulatta msh homeobox 2 (MSX2), mRNA. ACCESSION NM_001266492 XM_001082405 VERSION NM_001266492.1 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. REFERENCE 1 (bases 1 to 1050) AUTHORS Zimin AV, Cornish AS, Maudhoo MD, Gibbs RM, Zhang X, Pandey S, Meehan DT, Wipfler K, Bosinger SE, Johnson ZP, Tharp GK, Marcais G, Roberts M, Ferguson B, Fox HS, Treangen T, Salzberg SL, Yorke JA and Norgren RB Jr. TITLE A new rhesus macaque assembly and annotation for next-generation sequencing analyses JOURNAL Biol. Direct 9 (1), 20 (2014) PUBMED 25319552 REMARK Publication Status: Online-Only COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from JV044304.1. On May 26, 2012 this sequence version replaced XM_001082405.2. ##Evidence-Data-START## Transcript exon combination :: SRR5038768.1078820.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA4688315, SAMEA4688317 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1050 /organism="Macaca mulatta" /mol_type="mRNA" /db_xref="taxon:9544" /chromosome="6" /map="6" gene 1..1050 /gene="MSX2" /note="msh homeobox 2" /db_xref="GeneID:694227" /db_xref="VGNC:VGNC:84448" CDS 23..826 /gene="MSX2" /codon_start=1 /product="homeobox protein MSX-2" /protein_id="NP_001253421.1" /db_xref="GeneID:694227" /db_xref="VGNC:VGNC:84448" /translation="
MASPSKGSDLFSPDEEGPAVVAGPGPGPGGAEGAAEERRVKVSSLPFSVEALMSDKKPPKEASPLPAESASAGATLRPLLLPGHGAREAHSPGPLVKPFETASVKSENSEDGAAWMQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSSFSLPFPISSPLQAASIYGASYPFHRPVLPIPPVGLYATPVGYGMYHLS"
misc_feature order(449..463,467..469,518..520,536..538,575..577, 581..586,593..598,602..610,614..619) /gene="MSX2" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 455..616 /gene="MSX2" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(455..457,464..466,584..586,593..598,605..607) /gene="MSX2" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN
cgacgaggagggcagagaagtcatggcttctccgtccaagggcagtgacctgttttcgcccgacgaggagggcccagcggtggtggccgggccaggcccggggcctgggggcgccgagggggccgcggaggagcgccgcgtcaaggtctccagcctgcccttcagcgtggaggcgctcatgtccgacaagaagccgcccaaggaggcgtccccgctgccggccgaaagcgcctcggccggggccaccctgcggccactgctgctgccaggacacggcgctcgggaagcgcacagccccgggccgctggtgaagcccttcgagaccgcctcggtcaagtcggaaaactcagaagatggagcggcgtggatgcaggaacccggccgatattcgccgccgccaagacacatgagccctaccacctgcaccctgaggaaacacaagaccaatcggaagccgcgcacaccctttaccacgtcccagctcctcgccctggagcgcaagttccgccagaaacagtacctctccattgcagagcgtgcagagttctccagctctctgaacctcacagagacccaggtcaaaatctggttccagaaccgaagggctaaggcgaaaagactgcaggaggccgaactggaaaagctgaaaatggctgcaaaacctatgctgccctccagcttcagtctccctttccccatcagctcgcccctgcaggcagcgtccatatatggagcatcctacccgttccatagacctgtgcttcccatcccgcccgtgggactgtatgccacgccagtgggatatggcatgtaccacctgtcctaaggaagaccagatcaatagactccatgatggatgcttgtttcaaagggcttcttctccctctccaagaaggcagtaccagccaatactcctgctctgctaaccctgcgtgcaccaccctaagcggctaggccgacagggccacatgacatagctgaaatttgttctttaggtggaggcaccaagccctgttttcttggtgtaatcttccagatgtccccttctcc
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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