LOCUS       NM_001195116            1768 bp    mRNA    linear   MAM 20-FEB-2022
DEFINITION  Sus scrofa NOBOX oogenesis homeobox (NOBOX), mRNA.
ACCESSION   NM_001195116
VERSION     NM_001195116.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Li G, Li M, Fang W, Wang W, He Y, Song X and Xu Y.
  TITLE     Cloning and characterization of porcine NOBOX gene
  JOURNAL   Sheng Wu Gong Cheng Xue Bao 25 (8), 1130-1137 (2009)
   PUBMED   19938448
  REMARK    GeneRIF: The expression levels of this gene in heart, kidney and
            oocytes are higher than that in other tissues, which suggested that
            the NOBOX protein might play an important role in those tissues.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from FJ587509.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FJ587509.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN04484963, SAMN04485012
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Sus scrofa"
                     /mol_type="mRNA"
                     /db_xref="taxon:9823"
                     /chromosome="9"
                     /map="9"
     gene            1..1768
                     /gene="NOBOX"
                     /note="NOBOX oogenesis homeobox"
                     /db_xref="GeneID:100499552"
                     /db_xref="VGNC:VGNC:90806"
     CDS             27..1445
                     /gene="NOBOX"
                     /note="OG2; OG-2; Og2x; POF5; TCAG_12042; newborn ovary
                     homeobox-encoding"
                     /codon_start=1
                     /product="homeobox protein NOBOX"
                     /protein_id="NP_001182045.1"
                     /db_xref="GeneID:100499552"
                     /db_xref="VGNC:VGNC:90806"
                     /translation="

MEPTGEQQGQEGGGKPPAARLEEEEELQRSSTPPTPPVGQKAPGEDEPLSCMISREKKPSEASGEMAGPDVGRASQAARSGVAHKDRALAPPRARPQGERCPLPVRKGKLGKRPYSPAPGKQKKPNAAGLASTASPSIPDAARDTYNPVPCGSGWGSCHLADLLSSLTQNNQNTDQKTRSPEAICQGRKKTRTLYRSDQLEELEKFIQEDHYPDSEKRREIAQTVNVAPQRIMVWFQNRRAKWRKVEKMNGKENKDTPAGAEPSPTSNQGSIMPPPACSYSEDLEPQDYQPSNQPGPFPFPHAPQTQLFQPPQPQFPYLQPFPFHMPSSLMPLLPEDPLFALSFGSNANTARSYFPGPPQGQFLLQPPAGNMGTVPWNDPCLPDLPFPGPFCPQALGSPPGIEDYFPDLFAAPYAQALGRQPSPGLARLPEGARPGAGPLLSKAQEEPPTSSAELPSAPEEGREEDQSSHGP"

     misc_feature    order(591..605,609..611,660..662,678..680,717..719,
                     723..728,735..740,744..752,756..761)
                     /gene="NOBOX"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    597..758
                     /gene="NOBOX"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    order(597..599,606..608,726..728,735..740,747..749)
                     /gene="NOBOX"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
ORIGIN      

gaaacgcgggcgctggagtccaggccatggagcccaccggagagcaacagggccaggagggtggaggcaagcccccggcggccaggctggaggaggaggaggaactgcagcggagctcaacacctccaacacctccagtggggcagaaagccccgggtgaggacgagcccctctcctgcatgatctccagagagaagaagccatcagaggcctctggagaaatggctggccctgatgtggggagagcctcccaggccgcccgctcaggggtggcccacaaagacagagccctggccccacctagagctcggcctcagggggaaaggtgtccccttcctgtgagaaaggggaagctggggaagaggccctactctccagcccctggcaagcagaaaaagcctaatgctgcaggtctggcctccacggcatctcccagcatccctgatgcagctcgtgacacgtacaacccagtgccttgtgggtcaggctgggggtcctgccacctggctgacctccttagctcattgacccagaacaaccaaaacacagatcagaagacgaggtccccagaggccatctgccaaggtcggaaaaagactcgaaccctgtaccgctctgaccagctggaggagctagaaaagttcatccaagaagaccactatccggacagcgaaaagcgccgggagatcgcccagacagtgaatgtcgccccccaacgcatcatggtgtggttccagaatcgccgggcaaagtggcgaaaagtggagaaaatgaatgggaaggagaacaaggacactcctgcaggcgctgagccttcccccaccagcaaccagggcagcatcatgccaccacccgcctgctcttactcagaagacctggaaccccaggattatcaacccagcaaccagccagggccattccccttcccccatgctccacagacccagcttttccaacctccccagccccagtttccatacctgcaacctttccccttccacatgcccagctcattgatgcctctgctaccggaggaccctctctttgcattgtcctttggcagcaatgcgaacacagcccggagctatttcccaggccctccgcaggggcagttcctgctgcagccacctgctggcaacatgggtacagtcccctggaatgacccctgcttgccagacctgcccttccctggtcctttctgtccacaagctctggggtcccccccaggaattgaagactacttcccagatctgtttgctgccccgtatgctcaggctttgggcaggcagccttcgccaggcctcgcccggctgcctgaaggggccaggcctggagcagggcctctactcagtaaggcccaagaggagccaccaacctcctctgcggagctgccctcagcacctgaggagggccgagaggaagaccagagcagccacggcccctaatcctggggcagagtagagaagaggctgccctgccagagaggaatggcagttgaatgctagaaaagactggactctattaatgggggcagaagtcagggttcccccccgcccttggtgggctcatcttgctgaacattgatttgagaaggaagaaggctgaccctccctttctcccctaacctctgcacggtattagctctgaatgttgtatcagtttatgttattttcctcgctacgcaaatgagccggagtgtccattgtaagcagtaaactaaactagtctacaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaaaaaa

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