LOCUS       NM_001161644            1741 bp    mRNA    linear   MAM 17-FEB-2017
DEFINITION  Sus scrofa claudin 16 (CLDN16), mRNA.
ACCESSION   NM_001161644
VERSION     NM_001161644.2
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FP312815.2.
            
            On Feb 17, 2017 this sequence version replaced NM_001161644.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FJ873105.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN03939316 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-355               FP312815.2         60537-60891         c
            356-458             FP312815.2         47288-47390         c
            459-623             FP312815.2         43072-43236         c
            624-815             FP312815.2         40366-40557         c
            816-1741            FP312815.2         38784-39709         c
FEATURES             Location/Qualifiers
     source          1..1741
                     /organism="Sus scrofa"
                     /mol_type="mRNA"
                     /db_xref="taxon:9823"
                     /chromosome="13"
                     /map="13"
                     /breed="mixed"
     gene            1..1741
                     /gene="CLDN16"
                     /note="claudin 16"
                     /db_xref="GeneID:100302019"
     CDS             242..949
                     /gene="CLDN16"
                     /codon_start=1
                     /product="claudin-16"
                     /protein_id="NP_001155116.2"
                     /db_xref="GeneID:100302019"
                     /translation="

MRDLLQYVACFFALFSTGFLVVATWTDCWMVNADDSLEVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADVLAGFGFIILLLGLDCVKFLPDEPYIKVRICFVAGTTLLIAGAPGIIGSVWYAVDVYVERTSLILHNIFLGIQYKFGWSCWLGMAGSLGCFLAGAVLTCCLYLFKDVGLERNYPYSMRKAYSTTAVSMAKSYVAPRTQTAKMYAVDTRV"

     misc_feature    272..790
                     /gene="CLDN16"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      

ttggaggttggtcgcttcagataatgacctccaggacccctctgtgggttccagcctgtttgtattactcttgctgcaacttaagacgcctgcggtggagagtaaggaaaaggaaaagatcgttattttcaacaatccccaggtaccagaagcacagaagactgatagcattccagctacctacgtgagcccagggctggcagcttcccatgtgtcccttgcagacaaggtgctcactaagatgagggatcttcttcagtatgtcgcctgcttctttgcgcttttctctactggcttcttggttgtggccacctggacagactgttggatggtgaatgcagatgattccctggaggtgagcacaaaatgccgaggcctctggtgggagtgtgtcacaaatgcttttgatgggattcgcacctgtgatgagtacgattctatacttgccgaacaccccttgaagctggtagtaacgcgggcactgatgattactgcagatgttctagctggatttggatttattatcctgctccttggtcttgactgtgtgaaattcctccctgatgagccatacatcaaagtccgcatctgctttgttgctggaaccacattactaatagcaggtgccccaggaatcattggctctgtgtggtatgctgtcgatgtttatgtggagcgtacttctctgattttgcacaatatatttcttggcatccaatacaaatttggttggtcgtgttggcttggaatggctgggtctctgggttgctttttggctggtgctgtcctcacatgctgcttatacctctttaaagatgttggacttgagaggaactatccttactccatgaggaaggcctattcaactacagctgtttcgatggccaagtcgtatgtggcccctcggacacagactgccaaaatgtatgctgtagacactagggtgtaaagtgacacatgctggtctgtgtgtatttgtttcttaaccaataactcaatatgttcaagttcaataagagcggacaaattcgggaacacttctttagactccacgttgagctaaattcattgcttagcttaatcaaaaagtttgattctcctatcacttcttctcaactattcttaaattcttccagtctttcaccctccctctctcacacaaacatacacacgttttccctgcatcttaagagaaggttgcaggaatataaaagtgtttgttgtgatttctattttgctattagagatagtgacatggagatattaaaataaagtggcacttgaagaatagaaagcgactttcaaaagaggccagagattctaatctatgaagggattgacaaggtcttagctctttccctggctttcagctcactttttgtattcttaactgagtgagttctgtgaaaacttttaagatgtcttgcagtttcaagtcagtatattaaagcgtaccattgctctgattctgttaaaatagaaaaagaaaatagcttcatggaccagccactggtgggggttgaaaataaaaaggtccctctccatgctctaaaggtcaaaagcaaatgctaaattaatcccggagtcagtgctaactttctttttcattaacaacagaggtctgtatgttattttatcactactctaaatttgcctgtatattgtcgaatattaacatatggcagttgtagctaaaccagggagttcacttagtgttgactgactactgagcatccccatt

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