GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-04-20 17:35:06, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001105725            2506 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus cyclin G2 (Ccng2), mRNA.
ACCESSION   NM_001105725 XM_001063045 XM_223270
VERSION     NM_001105725.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ohno S, Ikeda JI, Naito Y, Okuzaki D, Sasakura T, Fukushima K,
            Nishikawa Y, Ota K, Kato Y, Wang M, Torigata K, Kasama T, Uchihashi
            T, Miura D, Yabuta N, Morii E and Nojima H.
  TITLE     Comprehensive phenotypic analysis of knockout mice deficient in
            cyclin G1 and cyclin G2
  JOURNAL   Sci Rep 6, 39091 (2016)
   PUBMED   27982046
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Mason JL, Xuan S, Dragatsis I, Efstratiadis A and Goldman JE.
  TITLE     Insulin-like growth factor (IGF) signaling through type 1 IGF
            receptor plays an important role in remyelination
  JOURNAL   J Neurosci 23 (20), 7710-7718 (2003)
   PUBMED   12930811
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC169085.1.
            
            On Sep 4, 2008 this sequence version replaced NM_001105725.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169085.1, SRR8487231.165291.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2506
                     /gene="Ccng2"
                     /note="cyclin G2"
                     /db_xref="GeneID:29157"
                     /db_xref="RGD:1305002"
     exon            1..183
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    58..60
                     /gene="Ccng2"
                     /note="upstream in-frame stop codon"
     CDS             184..1218
                     /gene="Ccng2"
                     /codon_start=1
                     /product="cyclin-G2"
                     /protein_id="NP_001099195.1"
                     /db_xref="GeneID:29157"
                     /db_xref="RGD:1305002"
                     /translation="
MKDLGAEHLAGGEGVQLFGLLNFYLEQEQRYQPREKGLTLMEATPENDNTLCSRLRNAKVEDLRSLTNFFGSGTETFVLAVNILDRFLALMKVKPKHLSCIGVCCFLLAARLAEEECDIPPTHDVIRISQCKCTASDIKRMEKIISEKLHYELEATTALNFLHLYHAIVFCHSPERKEVLSLDKLEAQLKACNCRLVFSKAKPSVLALCLLNLEIETIKSVELLEILLLVKKHLKISDTEFFYWRELVSKCLAEYSSPHCCKPDLKKLVWIVSRRTAQSLHNSYYSVPELPTIPEGGCFDGSESEDSGEDMSCGEESLSSSPPSDQECTFFFDFQVAQTLCFPP"
     misc_feature    346..633
                     /gene="Ccng2"
                     /note="cyclin box found in cyclin-G2 (CCNG2) and similar
                     proteins; Region: CYCLIN_CCNG2; cd20584"
                     /db_xref="CDD:410287"
     exon            184..321
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            322..459
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            460..710
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            711..789
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            790..888
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            889..1094
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..2472
                     /gene="Ccng2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
gtggaggtgcagggcgggcgcagcgcccggctgaagagcagcatgaagcccgggctgtgagacccggcggcggcggggaggtcggatgcgggtgtcggggcgccgctgagcaggctgtcccctacctcggaggagggtccggacgcccccgccgcgccggtccgcgacgccggggccgacacgatgaaggatttgggggccgagcacttggcaggtggcgaaggggttcagcttttcggattgttgaacttctacctggaacaagaacagagataccaacctcgagaaaaagggctgaccttgatggaggctaccccagagaatgataacactttgtgttcaagactgagaaatgccaaagttgaagatttaagaagtttaactaacttttttggatctggcactgaaacttttgttctggctgtcaatattttggatagattcttggccctgatgaaggtgaagcccaaacacctgtcctgcattggagtctgctgctttttgctggcagccagactggcggaggaagaatgcgacatccccccgacgcacgacgtgatccggatcagtcagtgtaaatgcacagcgtctgacatcaaacgaatggagaaaatcatctcagagaaactgcactatgagctggaagccaccactgccttaaactttttgcacttgtaccacgcaattgtattttgtcatagtccagagaggaaggaagttctgagcctcgataaactggaagctcagctgaaagcttgcaactgccggcttgtcttttcaaaagcaaaaccatctgtattagctctgtgccttctcaatttggaaatagaaacaataaaatccgttgaactgctggaaattctcctgcttgttaaaaaacatttgaagatcagcgacactgaattcttttactggagggaactggtttctaaatgcctcgctgaatactcttctccccactgctgcaagcctgacctgaagaagctggtttggattgtttctcggcgcactgcgcagagcctccacaacagctactacagtgttcccgagctgcccaccatcccggaggggggctgctttgatgggagtgagagtgaggactctggtgaagacatgagctgtggagaggagagtctgagcagctcccctccgagtgatcaggaatgcaccttcttctttgacttccaggtggctcagacactgtgctttccaccttagagttcacaagtctgtcagggtttaaagtgtgtgtacctgtttcaaagcaatacttgggggagtgggtagttttctagtccggcccccgtctagacaggaatttcacagactggaatacctaccttctgtttattattcagatcagatctggcctattttcatatttaatcctaagccatcaaatgggttagtgcctcttaatagtactttaaacattggcactttattttcttgttgacacttgtccgtggggaggagggaaggtgctgacaccttcattccttttcaggacttttagagatgactagtgtagcccatctgaaactgtacagccttcaggtgtctgtatttaacagactgcaagggcttccttagcaggggcagagggcagtcctttcctgtttccttctccccagttctcagaacagagactgcagtactcttgagtgtctaacactgattctgtttttctattggcgatgtattgtctaacacagatcctatacattaagaatgatactgacacgtctgcaaattttagtttgtaaatgtcttgagattctgctgaagcagaaattgccaccaagctaggactgttagctgcattcttcatacctaagcattgtcaggatgtagtattactttattgttgcctaaaaagttcataatctgctagttttgcatgcacctgtgtgaaagcggaacaggaagtggaataggcatacacagagcaggaagtggcacagatacgaacagaaatggaggtgataagtgctgatcagctcatctcactttcttgtattaagatagctgcatgattactttctaattgttttataattcacatttcatgatgtgttgtacatgggtgccaagatgtgaatatgaagtgagccctccagtgttgtagtgctagtttaaagcagttctgtgtggcgatacagccataaggacgaagatgtgtacactctgtacacggaagattttgtacagagaatttttaactttataaacctatgtgaaaatgtaaatctttaagaatgtacataaaatactgtatttttttaccttgtgtgtgataatctggtcagtgcatgtaaatataatttattgtgtattctatattatgttcaaacagtgatgacttactttttattagtaagtcaacacccaatgaggtgttttccaaagtagatttttttgaattcagaataggtcataattcaaaataaaaattttaatgaattctccctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]