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2025-02-22 14:14:52, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       NM_001105218            2451 bp    mRNA    linear   VRT 30-OCT-2024
DEFINITION  Takifugu rubripes taste receptor, type 1, member 2b (tas1r2b),
            mRNA.
ACCESSION   NM_001105218
VERSION     NM_001105218.2
KEYWORDS    RefSeq.
SOURCE      Takifugu rubripes (Fugu rubripes)
  ORGANISM  Takifugu rubripes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea;
            Tetraodontidae; Takifugu.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Ishimaru,Y., Okada,S., Naito,H., Nagai,T., Yasuoka,A., Matsumoto,I.
            and Abe,K.
  TITLE     Two families of candidate taste receptors in fishes
  JOURNAL   Mech Dev 122 (12), 1310-1321 (2005)
   PUBMED   16274966
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            LR584237.1.
            
            On Oct 30, 2024 this sequence version replaced NM_001105218.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB200912.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN07340848,
                                           SAMN07340849 [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-182               LR584237.1         7263693-7263874     c
            183-480             LR584237.1         7263305-7263602     c
            481-1197            LR584237.1         7262501-7263217     c
            1198-1401           LR584237.1         7262181-7262384     c
            1402-1522           LR584237.1         7261918-7262038     c
            1523-2451           LR584237.1         7260753-7261681     c
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Takifugu rubripes"
                     /mol_type="mRNA"
                     /db_xref="taxon:31033"
                     /chromosome="3"
                     /map="3"
     gene            1..2451
                     /gene="tas1r2b"
                     /note="taste receptor, type 1, member 2b"
                     /db_xref="GeneID:100125678"
     CDS             1..2451
                     /gene="tas1r2b"
                     /codon_start=1
                     /product="taste receptor, type 1, member 2b precursor"
                     /protein_id="NP_001098688.2"
                     /db_xref="GeneID:100125678"
                     /translation="
MGCSLACLCLLGCVLYPLAQCTVPASEFRLEGDYLIGGLFEIHYEAFPTFHGRPQTMDCSSKFLILSNYRRFQLMRFAVAEINNSTSLLPNVTLGYEVFDHCTDAQSFSDVFKLLSVNNVIQPWNVPNKNVSKVVAVLGLFSSTSTLTVAPLFMSDFIPLISYGSSSSIFSEKAKFPSFLRTVHSSKKVMEVIVKILQYFKWHWVAFLYSSDDYGTDGLKLFIEKIKDTEICLAYTHSLDSSHYLSVFNQIDAQRINLIVVFAPHWHAIPLVQAAIRHNVTGKVWIAGEAWSLNKELPKEKGIKNIGTVIGVSQPVVTIPGFEDFLYSVKKGNRCESTEQQFCNQIYNCSQESADILAADPSYSFSVYSAVYSTAHALHNVLNCDFGKCDNGIPISPPVLLAQLKKSNFTLLTERVQFDENGDPRFGSYAVLFWNQTGDPENFGTCWFYPSVKIFINDSKIQWHSKEVPISQCSKDCKEGYAKRIEGIHQCCFKCEICPNGTFVNRTKDPFNCIDCEEHQWSAAGSTSCLPRTVEYVAFTDTAAVVILVGAGLLLALTLAMCVLFAINYNTPVVRSAGGPMCFLILGCLSLCSISIFFFFDKPTVAFCVLRFLPFVLFYTVCLACFVVRSFQIVSIFKIAAKFPQAHSWWMKYHGQWLVISVTFVIQAFLIIVSVSSDPPSPFRDIVSYPDKIILGCFMNLKTSSVSFVLLLLLCLLCFIFSYMGKDLPKNYNEAKAITFCLLLLILTWIIFTTASLLYQGKYIHSLNALAVLSSIYSFLLWYFLPKCYIIIFQPQKNTQKYFQGLIQDYTKTISQ"
     sig_peptide     1..63
                     /gene="tas1r2b"
                     /inference="COORDINATES: ab initio prediction:SignalP:6.0"
     exon            1..182
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
     exon            183..480
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
     exon            481..1197
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
     exon            1198..1401
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
     exon            1402..1522
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
     exon            1523..2451
                     /gene="tas1r2b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
atgggatgttctctggcttgcctgtgtctcctgggatgtgttctgtatccactggctcagtgcactgtcccagcctcagagtttaggctggaaggagattatttgattggtggcctttttgaaatccattacgaagccttcccaacctttcatggcagaccacaaaccatggactgctccagtaaattcctcattttgtcaaactatcgaaggtttcagttgatgagattcgccgtggcggaaatcaacaactccacgagcctcctgccaaatgtaactctcggttatgaggtgtttgaccactgcacggatgctcagagcttttcggacgttttcaaattactctcggtcaataatgtgatccaaccttggaacgtaccaaacaagaatgtgtccaaagtggtagcagtgctcggtctcttcagcagcacctctacgctgactgtggccccactgttcatgtctgatttcatcccactgatctcctatggatcctcaagttccatcttctcggaaaaggccaaatttccctctttcctgcgaacagtgcactccagcaaaaaagtgatggaagtgattgtaaaaattttgcagtacttcaagtggcactgggttgcctttctttacagcagtgatgattatggcaccgatgggcttaaactcttcatagagaagataaaggacactgagatctgcctggcctacactcacagtcttgacagcagtcattacttatcagtatttaaccagatcgatgcccagaggattaaccttatcgtggtttttgctccccattggcacgctatacctctggttcaagcagcaatacggcacaatgtcacgggcaaggtgtggatagcaggagaagcatggtctctaaacaaggagctcccgaaggagaaaggaatcaaaaacatcggaaccgtgatcggggtgtcccagcccgtggtgacgattcctggttttgaagattttctttattcggttaaaaaggggaatcgatgcgaaagcaccgagcagcagttctgcaaccagatttacaactgcagtcaagagagcgctgatatcctagctgcggacccttcttactcgttttccgtttattctgctgtctacagcactgctcacgccttgcacaacgtcttaaactgtgactttggtaaatgtgataacggcattcccatatcgccacccgtgcttctagcccagttaaagaagtcaaattttacactcttaaccgagagagttcagttcgatgagaatggtgatcccaggtttggctcctatgcggtgttgttctggaaccagaccggtgacccagagaatttcggcacctgttggttttacccttcggtcaaaatattcatcaatgacagcaaaatccagtggcactcaaaagaagtgcctatttcccagtgttccaaggactgtaaagaggggtatgcaaaaagaatagagggaatccatcaatgttgtttcaaatgtgaaatctgtccaaatggaacttttgtcaacagaacaaaggatcccttcaactgcatcgactgtgaggagcaccagtggtctgcagcaggaagcacatcgtgtctcccgcggacggtggagtacgtggcctttacggacacagcggcggtcgtgatcctggtcggagccggcctgttgctggctctcacgttagccatgtgtgttctctttgctatcaactacaacacgcctgtggtccgatctgccgggggacccatgtgctttctgatcttgggctgcctcagtctctgtagcatcagcatcttcttcttctttgacaaaccgactgttgccttttgcgttttaagattcctgccctttgttttattctacactgtctgtctcgcctgctttgtcgtccgctcctttcagatcgtcagcatttttaaaatagctgccaagttcccccaagcccacagctggtggatgaagtatcacggtcagtggctggtcatctccgtcacctttgtcattcaggcatttctgatcattgtcagcgtatcatctgaccccccctcacccttcagggacattgtctcttacccagacaaaatcatccttggatgtttcatgaatcttaaaacatcatctgtttcatttgttttacttctattgttgtgcctgctctgcttcattttttcctacatgggcaaagaccttccgaaaaattacaacgaggccaaagcgataaccttctgcctgctcctgctgatcctcacctggatcatatttaccaccgcgtccctgctttaccaaggcaaatacattcactcactgaacgctttggcagtgctctccagcatctactcctttttgttgtggtatttcctcccaaaatgttacatcatcatttttcagcctcagaagaacacacagaagtacttccaaggtctgattcaggattacaccaagactattagccagtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]