LOCUS       XR_013439214            3603 bp    RNA     linear   ROD 11-DEC-2025
DEFINITION  PREDICTED: Ictidomys tridecemlineatus NRDE-2, necessary for RNA
            interference, domain containing (Nrde2), transcript variant X4,
            misc_RNA.
ACCESSION   XR_013439214
VERSION     XR_013439214.1
DBLINK      BioProject: PRJNA1337663
KEYWORDS    RefSeq.
SOURCE      Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
  ORGANISM  Ictidomys tridecemlineatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_135481) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_052094955.1-RS_2025_11
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/20/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3603
                     /organism="Ictidomys tridecemlineatus"
                     /mol_type="transcribed RNA"
                     /isolate="mIctTri1"
                     /db_xref="taxon:43179"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="muscle, liver"
                     /dev_stage="adult"
                     /geo_loc_name="USA: New Haven, Connecticut"
                     /lat_lon="41.3083 N 72.9279 W"
                     /collection_date="2023-10-18"
                     /collected_by="Luke Olsen"
     gene            1..3603
                     /gene="Nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 52 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:101978561"
                     /db_xref="RGD:12475371"
     misc_RNA        1..3603
                     /gene="Nrde2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:101978561"
                     /db_xref="RGD:12475371"
ORIGIN      

actgcgaccggtggagtcctccaatcggcgctcgccggcaggggccacttccgtagagaggaacggcggagcggcctgtgtgcatggcgctgttcccagcctttgcgggcgttagtgaggcccccgatggtgggggttccaggaaagaattagactggctgagtaacccaagtttttgtgtcggaactgtaactaccctgagccaacaaactgaagaggccacagctcttgtttctgaagggtcatcaccaacaaggagtcctccgaaatcagagccttcagatgaaagtgatgctagcagaaagctcacacaaataagcaggagaaagaagaaggaaaaaaagaaaaaaaggaagcatcagcaccacaagaaaaccaagaggaagcaccggcagtcgagcagcagcgagtctgagccagattctgattcaggaaaggacagatcttccaggagcatcagaagcagccagaatcaagctgagaaacccaatcaaggaaataatactgctgctgatgctggacttcgttctgtctggcttgaggacattcagtctctgacaggagaaaccttcagaacagataagaaacccgatcctgcaaactgggagtataagtctctctaccgaggggatattgcaagatacaagaggaaaggagactcctgcctgggcattaacccgaagaagcagtgcatatcttgggaaggggcttcctcaacaaagaagtgtgcgcacaggcacgttgaacgctattttacgaagaagagtgtggggttgatgagcgttgatggcgtttctgttagcagtagaactgatcctccctctgcagagccggtcttgtttatccccgtgaaggacttggatgatatggcttctcctgttacaacctggttgaatcctttggggatttatgatcggtcaaccacacagtggttacaaggacagggtccttcagaagcagaatcaaagcagccagactcacagctggacagagagaatgctcttctcaaggcaaaggtggaggagtttaataggaaggttcgggagaaccctcgggatattcagctgtggatggcatttgttgcttttcaggatgaggtcatgaggagtcctggcctgtatgctatggaggaaggagaacaggagaagagaaagaagtccctgaagctcatcctggagaagaagctggccatcctggagcgggccattgagagcaaccagagcagcatcgatctcaagctcgccaagctgaagctctgtgcggagttctgggagcctgctgcgctggtcaaagagtggcagaaactgatctttttacatcccaataacacggtcctttggcagaaataccttttgttttgccagagccaatttagcactttttcaatatcaaaaattcacagtctttatggaaagtgcttgagcactctgtctgctgttaaggatggcagcatcttatctcaccctgcgctgcctggcatagaagaggccatgtttgcactccttcttcagcagtgccactttctgcggcaggctggccactcagagaaggccgtgtctttgttccaggccatgattgacttcactttcttcaaacctgacagtgtgaaagatctgcctaccaaagtacaggtggaattttttgagcccttctgggacagtggagagccacggcctggggagaaaggagcgcgaggctggagggcgtggatgcaccagcaggagcggggtggctgggtggtcatcaatccagatgaggatgatgacgagccagaagaggatgaccaggagataaaagagaagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagatcaaaggcactggcggccctggcgccctgataagaccaagaaacaaactgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattggacaatctctgatcagactttccagccaagagcttcagttccagctgatcgaggcctttctgcagttcttgggtgtgccttccggctttgtccctccagcctcctgcctgtacctggccatggatgagagcagcatctttgatagtggactctgtgatgaaaagcccttgacttttttcaacctttcattttctggcattagctgtgttggccgcatggaccgcttgggctctctccgctggaccaggggtcacaatcgagagggcgaggagttcattcgcaatgtcttccaccttgtgatgcctttgttttcaggcaagcaaaagtctcagctctgcttctcctggttacagtacgagattgcaaaggtcatttggtgtctgcacactaaaaacaagaagagattaaagtcacaggggaagaactgcaaaaaactagccaagaatctcctcaaagagccagaaaaccgtaataatttttgcctctggaagcagtacgcacatctggagtggttgcttggcaacacagaggatgcccgaaaagtttttgatacagccctcagtatggtgggcagcagcgagctgaaggatcgtgaactttgtgaactcagtctcctctatgctgagctggaggtggagctatcactggactcggcaggggccaccacggcccgagctgttcacatactaacccgactgacagagagcagtccctacgggcccttcactgggcaggtcttacccactaatgttttgaaagctcgaaaggcttatgagcatgcgctacaagactgtgtgagtaagagctgtgtctctgatccaactcctcctgactccttgaactgcctgagtagcttggtcaaatgctttatgctgttccagtatttgaccgtagggattgaagctgccatgcagatatatgaacagctatttgccaaactgaagggttctgttttctcagaaggctctggcatggaggacggtgccagctcccagaatctgaccagtgttcttgaagccatgacgctgatgcacacaagtctgctgaggttccacatgaaagttaatgtttaccctttgactccgctacgagaggcgctctcggaggctttgaggctgtatcccggcaaccaggttctttggaggtcatatgttcagattcaaaataagtctcacagtgctagcaagaccagaaaattctttgatacaatgaccaggtctgccaaacccatggagccgtggttatttgcaattgaagctgagaaaatgaggaaaagactggtagaaactgttcagagggtgggaggtagagagatccacgccaccatcccagagactggcttaacacatcggatcagagccctgtttgagaatgcagtgcggagtgaccacggcagccagtgccccttactgtggaggatgtatttgaattttttgggagaggagaaccatgttgccctgctcacggctgacacaggagctactccagggaggctggcctgcatgttccttacatgtgcgcgacttggctccatgggctgagggtgaaggaagggggcgcctctgtgtgagctctgtcctgcccctctgaagactcattggcaggatcaggatgtgcacagagatggcttccttaggaaacaaagacagaagcaaa

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