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Previous release (v1)
2026-04-25 22:29:22, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_013346417 3453 bp RNA linear VRT 03-DEC-2025
DEFINITION PREDICTED: Eretmochelys imbricata NRDE-2, necessary for RNA
interference, domain containing (NRDE2), transcript variant X3,
misc_RNA.
ACCESSION XR_013346417
VERSION XR_013346417.1
DBLINK BioProject: PRJNA1372753
KEYWORDS RefSeq.
SOURCE Eretmochelys imbricata (hawksbill sea turtle)
ORGANISM Eretmochelys imbricata
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
Americhelydia; Chelonioidea; Cheloniidae; Eretmochelys.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_135577) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_965152235.1-RS_2025_12
Annotation Pipeline :: NCBI Eukaryotic Genome Annotation
Pipeline (EGAP)
Annotation Software Version :: 10.5
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 12/02/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3453
/organism="Eretmochelys imbricata"
/mol_type="transcribed RNA"
/isolate="rEreImb1"
/db_xref="taxon:27787"
/chromosome="6"
/geo_loc_name="USA: Hawai'i Island, Hawai'i"
/collection_date="2021-11-04"
gene 1..3453
/gene="NRDE2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 3 samples with support for all annotated
introns"
/db_xref="GeneID:144266090"
misc_RNA 1..3453
/gene="NRDE2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X3"
/db_xref="GeneID:144266090"
ORIGIN
gccatcttgcctcgttggggtggccggggtctccttgggaagccagaggggaggaaggtgtggttcagcccatggctcttttcccggcctttgccggcgccgcagagcccggggagacgccagccagcggtagcgagggctccagaagagaattggactggcttagcaatccaagcttctccacagaagatgcactgaaactgcaccagcacactgcaaaggcttcagatcctgctcctaagagatcacaatttataagcaggagtccttcaaggtcagagctctcaggaggaagtgacaccaatgaagatctaaaaaaatcaactaagaaaaggaaagggaaaaagaaaaagcatcatcaccacaaaaaaagaaaaaagaaaaccagagaggaatcaagtaacagtgagtcagacttggacagtgagtgtatgagggataaacctagaggaagtgacacaaaccgtgaaagagaagcagcaacattgaatctagaagacattacatcaaatgttgccaccaatcgctttgtttggcttgaggatattcaggctttgacagcagaaaccttcagaacagacaagaaaccagaccctgcaaactgggaatacaagtcactgtatcgaggggacatagcaagatacaagcggaaaggtgactcatgccttggtattgacctaaagaaacaatgtataacttgggaaagttccatggtagaaaagaaacaatcccccaagcgacctgaacgctacttcacgaagaatagtgtgaaattattgaccacagatggaattccagtttacagtaaaagccaaacttcatctggttcaagcacttttataccagtttcacaactggacagtgatgctcctactacaacaacctgtgtgaatcctcttgggatttatgatccattgaccacactctggttgcaaggaaaaggtcccccagagcatgagactttaaagcagcaggcatcccaagagaccagtgggaatgttaactctattctaatggcaaaagtggaagaatataataggatggtcagagaaaatccaagagatgttcacacttggatggaatttgtttcttttcaggatgaaataatgagaggacctagcccttatgccatcaaagagggagagcaggaaataaggagaaaatcattcaagctaatcctagaaaagaaactggccattttagagagagctattgaaagcaacccaaatgatgttgatctgaaacttgccaagctgaagctttgtacagaattctgggaaccatcaactttgatcaaagaatggcagaagctggtttttctgcatcccaataatccactgctgtggcagaaatatctcttattttgtcaaagtcagttcagcaccttttcagtttcaaaagtccatagtttatatggaaaatgtttgagcactttggcagctgtacaggatggcagcatggtatcacatcctatactgcctggcacagaggaagctatgttagctgtctttcttcagcagtgccattttcttagacaggcgggccattctgagaaagctgtgtctttgttccaagccctggttgatttcaccttctttaaacctgacagcgtaaaagatctgccaacaagaggacaggtagagttctttgaaccattttgggatagtggagagcctcggtttggagaaaaaggagcaaaaggctggaaatcatggatgcatcaacaagaaaagggaggctggattatcatcaataaacctgatgatgaggaggaagatggagatgaagatcaagaaataaaggataaaactctacccaaatggcaaatttggctggacattgaatgttcccgtgaaacaaggcattggctgccttggcgacctgacaaaactaaaaagcagactgaagaagattgtgaagatccggagagacaggtattgtttgatgatcttgggccatctttaatcagactttctagtccagatcttcagtttcagctgctgtactcatttctgcaattcttgggagttccatgtgggtgtagtctctttccttcaaatctctatatcgcaatggatgagaacaacatctttgacaatgggcagtctgaaaggccgctgacttcttttgactcgctgctttctggagtcaatagtattggccatatggacacaatgaccagagggagacagcacataggacacagtaaggaaggagaggagttcatacagaatgtctttcatttaatattgccgttattttcaggaaaggaaaagtcaaacctttctgtctgttggctacaatatgaaatctcaaaggttggtcaatgtctccaagcaaaaaacaagaagaaactgaagtcacagggaaagaaaagcaaaaaactagccaagaatctccttaaggcatctgaaaaccgaaacaacctttccctctggaaactgtatgcctacttggaatggttacttggcaacacagaagatgctagaaaagtatttgatacagctctttgcttggcaggaactgaaggaatgagaaatacccaactctgtaatctgagcctgctttatgcttcactggaagtggagctactagagagtctggaggaaactgttatgtcacgtgctgtacatatattgaccaaactggctgaaagtgggccatatgtaccttatcctgggcacgtgttatctgtgaatatcttgaaagctcggaaggcatatgagcatgcgttgcaagattatttaaatgaaagtccagtctctaattgggatcaggtcagcagttctaaccaactggttagtttagttggttgttatgcacttttccagtatttgactgttgggattgatgctgctgtattaatatgtagacatatttctgaaaagcttaaaggttctgcttcacggaagtttgaaggtattggagaaaatcttggcattcataatttccccactgctcttgaagcagtcacactcatgcacacaaatttactcaggtaccatatgaaagttagcatttaccctttaaatccactgcgagaggcactaacggaagctttgaagctgtatcctagcaaccagtctctttggaggtcatatatccagatccaaagcaagtctcacaatgctagcaaagcacgaagattttttgatagtgtcacaaggtctgctaagtccctagagccgtggctgtttgcaatccaagcagaggagatgagaaagaagcttgtcgagaatgttcagagatgttggagaaatatattcaacaattcctgaaactggattaaaaaatcggatcaaaactttatttgaacacgcaattcagagtgaaaacggtgcccattgtccgttgttgtggagaatgtgtttgaattttctgttttctctaggagataaagaaaggagcaaaggactgttttataaagcccttcagaactgtccctgggcaaag
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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