LOCUS       XR_013343784            8232 bp    RNA     linear   ROD 28-NOV-2025
DEFINITION  PREDICTED: Urocitellus parryii NRDE-2, necessary for RNA
            interference, domain containing (Nrde2), transcript variant X2,
            misc_RNA.
ACCESSION   XR_013343784
VERSION     XR_013343784.1
DBLINK      BioProject: PRJNA1369583
KEYWORDS    RefSeq.
SOURCE      Urocitellus parryii (Arctic ground squirrel)
  ORGANISM  Urocitellus parryii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_135536) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_045843805.1-RS_2025_11
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/26/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8232
                     /organism="Urocitellus parryii"
                     /mol_type="transcribed RNA"
                     /isolate="mUroPar1"
                     /db_xref="taxon:9999"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Pump Station No. 4 Area, Alaska"
                     /lat_lon="68.42815 N 149.353 W"
                     /collection_date="2011-11-16"
                     /collected_by="University of Alaska Fairbanks, Vadim
                     Fedorov"
     gene            1..8232
                     /gene="Nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:113186711"
     misc_RNA        1..8232
                     /gene="Nrde2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:113186711"
ORIGIN      

gagcggcctgtgtgcatggcgctgttcccagcctttgcgggcgttagtgaggcccccgatggtgggggttccaggaaagaattagactggctgagtaacccaagtttttgtgttggaactgtaactaccctgagccaacaaactgaagaggccacagctcttgtttctgaagggtcatcaccaacaaggagtcctctgaaatcagagccttcagatgaaagtgatgctagcagaaagctcacacaaataagcaggagaaagaagaaggaaaaaaagaaaaaaaggaagcatcagcaccacaagaaaaccaagaggaagcaccggcagtcgagcagcagcgagtctgagccagattctgattcaggaaaggacagatcttccaggagcatcagaagcagccagaatcaagctgagaaatccaatcaaggaaataatactgctgctgatgctggacttcgttctgtctggcttgaggacattcagtctctgacaggagaaaccttcagaacagataagaaacccgatcctgcaaactgggagtataagtctctctaccgaggggatattgcaagatacaagaggaaaggagactcctgcctgggcattaacccgaagaagcagtgcatatcttgggaaggggcttcctcaacaaagaagcgtgcgcacaggcacgttgaacgctattttacgaagaagagcgtggggttgatgagcgttgatggcgtttctgttagcagtagaactgatcctccctctgcagagccggtcttgtttatccccgtgaaggacttggatgatatggcttctcctgttacaacctggttgaatcctttggggatttatgatcagtcaaccacacagtggttacaaggacagggtccttcagaagcagaatcaaagcagccagactcacagctggacagagagaatgctcttctcaaggcaaaggtggaggagtttaataggaaggttcgggagaaccctcgggatattcagctgtggatggcatttgtcgcttttcaggatgaggtcatgaggagtcctggcctgtatgctatggaggaaggagaacaggagaagagaaagaagtccctgaagctcatcctggagaagaagctggccatcctggagcgggccattgagagcaaccagagcagcatcgatctcaagctcgccaagctgaagctctgtgcggagttctgggagcctgctgcgctggtcaaagagtggcagaaactgatctttttacatcccaataacacggtcctttggcagaaataccttttgttttgccagagccaatttagtactttttcaatatcaaaaattcacagtctttatggaaagtgcttgagcactctgtctgctgttaaggatggcagcatcttatctcaccctgcgctgcctggcatagaagaggccatgtttgcactccttcttcagcagtgccactttctgcggcaggctggccactcagagaaggccgtgtctttgttccaggccatggttgacttcactttcttcaaacctgacagtgtgaaagatctgcctaccaaagtacaggtggaattttttgagcccttctgggacagtggagagccacggcctggggagaaaggagctcgaggctggcgggcgtggatgcaccagcaggagcggggtggctgggtggtcatcaatccagatgaggatgatgacgagccagaagaggatgaccaggagataaaagagaagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagatcaaaggcactggaggccctggcgccctgataagaccaagaaacaaactgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattggacaatctctgatcagactttccagccaagagcttcagttccagctgatcgaggcctttctgcagttcttgggtgtgccttctggctttgtccctccagcctcctgcctgtacctggccatggatgagagcagcatctttgatagtggactctgtgatgaaaagcccttgacttttttcaacctttcattttctggcattagctgtgttggccgcatggaccggttgggctctctccgctggaccaggggtcacaatcgagagggcgaggagttcattcgcaatgtcttccaccttgtgatgcctttgttttcaggcaagcaaaagtctcagctctgcttctcctggttacggtacgagattgcaaaggtcatttggtgtctgcacactaaaaacaagaagagattaaagtcacaggggaagaactgcaaaaaactagccaagaatctcctcaaagagccagaaaaccgtaataatttttgcctctggaagcagtatgcacatctggagtggttgcttggcaacacagaggatgcccgaaaagtttttgatacagccctcagtatggtgggcagcagcgagctgaaggatcgtgaactttgtgaactcagtctcctctatgctgagctggaggtggagctgtcactggacttggcagaggccaccacggcccgagctgttcacatactaacccgactgacagagagcagtccctacaggcccttcactgggcaggtcttacccactaatattttgaaagctcgaaaggcttatgagcatgcgctacaagactgtgtgagtaagagttgtgtctctgatccaactcctgctgactccttgaactgcctgagtagcttggtcaaatgctttatgctgttccagtatttgaccgtagggattgaagctgctgtgcagatatatgaacagctatttgccaaactgaagggttctgttttctcagaaggctctggcatggaggatggtgccagctcccagaatctgaccagtgttcttgaagccatcacgctgatgcacacaagtctgctgaggttccacatgaaagttaatgtttaccctttgactccgctaagagaggcgctctcggaggctttgaggctgtatcccggcaaccaggttctttggaggtcatatgttcagattcaaaataagtctcacagtgctagcaagaccagaaaattctttgatacaatgaccaggtctgccaaacccctggagccatggttatttgcaattgaagctgagaaaatgaggaaaagactagtagaaactgttcagagggtgggaggtagagagatccatgccaccatcccagagaccggcttaacacatcggatcagagccctgtttgagaacgcagtgcggagtgaccacggcagccagtgccccttactgtggaggatgtatttgaattttttggcttccttaggaaacaaagacagaagcaaaggtgtgttctacaaagcacttcagaattgtccctgggcaaaggtgttgtacatggacgccgtggagtacttccctgacgagctgcaggaggttctggatctgatgactgagaaggagctgcgcgtgcggctgcccctggaggagctggagctcctgctggaggactagggtgcaggcaggggagctggggagcgcatgcgaggagcctctgttttggaagtgctcttttttggtcctttgtgtcggggttgtcaggcttttccatcttacaaaggttttggatgtgtaaacgacacaaagccattgctttacatattatatatgtgaatgtgtgcacctgtgtacagaggcgaaagatcaccagtgatgacgaaacgtgtggttgagctgtgtgtggattcctgttccttctgctcttgctttgcccagccagcactggccccgccctgttacacacagcccctggtggcatcattgagggtccttccagatccctctgttaggactttaaagtctggcccctttatattaggacgtctttctgaagctgggtggcaggagagcagattttgtccttatcctcagcccagcatagtggagggtcgtttaacccttggtgttccttcctgggtcaggtgtggggcaggtgtctgcttatttcctgagccccactgggtggctcctgcctctgcacagcagcatcccctgggatcttgggagcagtgcagactcccaggcctgccccagccctgcaagtcagagtctgccctccatcagtgacgagtggaaagccctgccagccctccacagaaagcctgctgatgacaccatcccagagagggcggactgcagccagcaccttctccacccagcccgactctgcaaggagcactgaggtctgcttggcctccgtgtggcagctggccctttttttgattgctgagggctgtgaatagaatgagagagaaatatccacattcgggcttctttctgctctgaagagattggcagcgcagtccttttcaccatgaatgtggcgggagggatgtcgcgtctgtcttgcccacagacctgctgcaaaacagatagctcctttctggactcttttttttttaatcctcatctgtataattgctgaagattttgcatttctttgcccccccccccccatacagaaacgcctgtgttgtgggatgtaaatttggcccaaagctgatggacaggttgggaaatagaaggggagtcagtgtgccagcgtgctttccaagggcagtgtctcaggatacccagtcactaccgcctcctgcccctccctgcgtgcgtttcttcagcaaagaggcacctaatggtgctccctctggtgtcttttcacagagtttagggagttgagagctcagccctgaactggacccactgagagccactagagcgcagggctgaaatgaggagcctcccgctcccagttcttggcagcttacgaaggaaagtctttgccacactcaccttcttgtcgggtgggtaacttgcacaccctgttgggggcatctggttgaagcccaggaccaagccacatcccccacaacagtgactcatgttttgatcctatctgattcctgcacctgttctcatttgattagaactttagaaactggcctgtgggtaactggtcccctcataccctagtgggatccttgtaccttgggagcctggaatgaattgtgcaaatgggcagtgaatccctgaaatgtgataaaggagcttctcacattgagttttggcacattaccctctgcatgagaatatgctttaacacacgcacacatacactcacacacacgaattctctgtgggtagcagtattttttaaagttttttgtacttgagacaaaatgggtactttatcactgagctacacccccagcccctttattgaagtttttggtactgaggattgaacccaggggcacttaaccactgaaccacatccatagcccttttaaaaaaataatttagtagagagtatctcacttagggccttgctaaattggtgagcttgcctttgaactcatgatcctcctgcctcagcctccctaactgctgggatttcaggtgtgcaccaccgtacccagccccttttattttttgagacaggtctcactgagtagctgaggctgactttagacttgcagtcgtcctgcctcagcctcattgggatcacaggtatacacaaccatgcctggctggctgtgggtaaatgttttatagaaaaatggatagtgatataattgtgattttttaaggtacttttgagattgctcaacataaaaacatgaaagatgattaggttgttcccaaaactaacaaactgatgggaaaagaaggggtttgaatttctccaagtctgtcaggcagttgctcttatatttatcaggagtgctaattaattcctcaaggagttcttatcacttcagaccctagggctcagccctgtcttgggtctggattgacagtggagcggagtataccatacttctggcttgtggattgctggacttgcagggatcaggaagagccaggaggtgccatctgtgctatgtccaggttcagtacacaatttttcctgaatatttttgatccgggattgactccatggatatggaacccttggatgtggagggctgactgtacacggaacttttttatcctgacccacttgagggtaagttgcgatagttttctgcacattaccatgcaagtatcaaataggaaatcagcatgaatatagttccctgtaagatcttaaggtcaaagttaggcctcaaggattgtcccaatgtcttctgtaggaagaggatcctatacacttggttatcatgtatatctctttggctcattcggtctagaagctttaacttttttttttttggtaatctggacacttttgaagtgtccagaatttgttgacacctctgggctagcacatactttcaagatgctcattgttgatgtttgttttgataaccaggttaagatggtgtctgctgggattctccaacgtgaagctgctttttccctaattaaagagcattttgtggggaggtattctgaaaattgcaaatgtcctgttatcaagttttcaattcatggatgttagtacgagctcagttcctattttaaaggactgtattccattgatgttaattattttgaccagtggcagcaccttcagactggcagtgtcttttgacatgtccattctgtatacttcttgctttctggcaaaatatacttaaggttcatgcccagctctggaatcactctagctccttttaggggagaatgatatttactttttctggtactggagatccagccctggacatcattcttgctcaacaagtgctcagccgtctaactacatccccaatccacaaatggtatttagaagcaaagatgtaggtctaggtatgttcattgtaattggagtgtcaccattcctagtggctgtcagtggattgagtacattctactttccttacctgtcacttctcagatagtgagaaacctggctcctgccatccttactatgtaactacacgtaaccaaccttttctatttctgccactatccagtcctgcatggatgccctcctcacttacaagggctctaatactcgttaggctgttttcacgtggatgcttcttaacctgcccacgccaatatcccactctgctcatgccaagtctctatgctgtgctgctgctccatgtggacaaggacctttctcaggctgcctgattgggaaccccacttcctcacacatacattgtcttcctcctcttgcactgggcctctttgttgggatatcctccatggtaggcagaatggtccccaaagatgcccacacctaagctctggaacatgtgagtgttgtgtggcaaaaggaactttgtaaagaaattgtcttttttaaaatggggaggttatcctggattatctgggtaggtcctcgtaatcacaatggcattagtgtgaaaaagataggcgggctgaaagatgggaaaaattcagaactcaaaagggacttggcttgctgttgctgactgaggatgagttgggggagcaggggtgcatgggcatgagtcaaggaataagtgtggccttcacaatctgggaaaggtcctcacatctgaggtaactcctaaaattccaagaaataattctgccagtgactcccaggttaagaaactgtattctcctctagagcctccataaaggaatgaagtcctgctaacaccatatgagccgcagaagaccagtgctggactgaggttttgttttttgttttttttttttttggtgatactgtggatttaacccatgggtgcactaccattgaactacactcccagcccttttaaattctgaagtagagtcctactgctaaggctggccttgaacttgaaatcctgctgcctcagcctcctgagtagctgggattataggtgaatactaccactcccagagacaaatttgattctttagtcctaacctgaagtttcttttaggaaccctcagtctcttgggaacttcagaacttactttcccacagagttgcaagaacctatgtggtccacaggtggaaccttctctctctctctctctcaaggcaatagccacattaattcagtcttataaacatcaaaaagatcactgtctgtgaaagagcacgctttattcggaagcagagagcagcacagtgaccaagagaaggtgcccaatgggcatcctatacatcgtactccagaagatacacaggatgttttgctaataaaaatcaacaggaacatggattcttctgggcaacttccccaaactcaaccctct

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