2024-11-19 20:35:35, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_010746300 4368 bp RNA linear MAM 10-JUL-2024 DEFINITION PREDICTED: Saccopteryx leptura NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X2, misc_RNA. ACCESSION XR_010746300 VERSION XR_010746300.1 DBLINK BioProject: PRJNA1130902 KEYWORDS RefSeq. SOURCE Saccopteryx leptura (lesser sac-winged bat) ORGANISM Saccopteryx leptura Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Emballonuridae; Emballonurinae; Saccopteryx. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089508) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036850995.1-RS_2024_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4368 /organism="Saccopteryx leptura" /mol_type="transcribed RNA" /isolate="mSacLep1" /db_xref="taxon:249018" /chromosome="6" /sex="male" /tissue_type="liver" /dev_stage="adult" /geo_loc_name="Panama: Gamboa Approx" /lat_lon="9.07091 N 79.42076 W" /collection_date="2019-03-18" /collected_by="Alvarez van Tussenbroek" gene 1..4368 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:136377419" misc_RNA 1..4368 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X2" /db_xref="GeneID:136377419" ORIGIN
tctaccggcgtgcgcccgccggcgccatttacgtagcggggaaaggcggtgcgacctgtggtcatggcgctgttcccggcttttgcgggtgttagtgaggctcccaatagcgggagctccaggaaagaattagattggctgagcaacccaagcttttgtgctggaaccgtaacgactgtgggccgagcgactgaagaggctacagctcttgtttctgcagggtccccgctgacgaggagtcctctgaaatcagagccttcagatgaaagcgacacgaacaaaaagctcagacaaacaagcaggaagaagaagaaggagaaaaggaagaaaaggaagcaccagcaccacaagaagactcggaggaggcgaggttccccgagcagcagcggctccgagcccggcaccgactcggagaaggacggggacggccctcccagcagcggcagaggcggcgggccggcggccaagcagctcactccagcaaataccactgctgctgagattggacctcgcttcgtttggcttgaggacgtccaggctctgacaggagaaaccttccgaacggataagaaaccagatcctgcaaactgggagtataagtccctctaccgaggagacatagcgagatacaagaggaaaggagactcctgccttggcattaacccaaagaagcagtgtatatcctgggagggggcttccacagaaaagaagcattcacacaagcacgttgagcgctatttcacgaagaagaacgtgggattgatgaacaccgatggggtcgccgttagcagtaaaactcaacctccctcctctgagccagtctcgtttatccctgtgacgggcccggacggtgcggcccctcccgtcacaagctggttgaacccgctggggatttatgatcagtccaccacgcagtggttacaaggacagggcccttcagagcaggaatccaagcagccagacgtacagccagaccaagagagcgtgcttctcaaggccaaggtggaggagttcaacaggagggtgcgggagaaccctcgggacacccagctgtggatggccttcgttgcttttcaggacgaggtcatgagaagccccggcctgtacgccatcgaggaaggagggcaggagaggaggaggaggtccgtgcggctccttctggagaagaagctggccgtcctggagcgcgccgtcgagagcaacccgagctgtgtggacctgaagctcgccaagctgaggctctgcacggagctctgggagccctccacgctgctcagggagtggcagaagctcgtgttcttacatcccaacaatacagccctttggcagaagtatcttctattttgccagagccagtttagcaccttctcagtatcgaaaatccacagcctctacgggaagtgcctgagcaccttgtctgctgtgaaggacggcagcgtcctctcccaccccgagctgcccggcaccgaggaggccatgctgggcctctttctccagcagtgccacttcctgcgccaggctgggcactctgagaaggccgtctctctgttccaggccatggttgacttcaccttcttcaagcccgacagtgtgaaagatctgtcgaccaaaggacaggtggagttctttgagcccttttgggacagcggagagccccgggccggggagaagggggcccgaggctggagggcctggatgcaccagcaggagcggggcggctgggtggtcatcagcccggatgaggaggaggatgacccggaagacgacgagcaggagatccgagagaagacgctgcccaggtggcaggtctggctcgctgcagagcggtcccgggaccagaggcactggcggccgtggcgcccagataagaccaggaagcaaaccgaggaggactgcgaagacccggagagacaggtgctgtttgacgatgttggacagtctctaatacgactttccagcccagctctccagttccagctggttgtggccttcctgcagctcctgggggtgccttccggcttcagccccccagcctcctgcctctatctggccatggacgagaacagcatctttgataatggactttatgacgagaagccgttgactttcctcaacctctcattttccggcgtcagctgtgttggccgcatggacccgtttggctgccggcgctggacgagaggtcacggccgagagggcgaggagttcatctgcaacatcttccacctggcgatgcctttgttttcgggcagggagaggtcccagctgtgctcctcctggttacggtacgagaccgcaaaggtcatttggtgtctgcacactaaaaacaagaagagattaaagtcacgaggaaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaactgcaacaacttttgcctctggaagcagtatgcacatctggagtggttgcttggcaacacagaggacgccagaaaagtttttgatacggcactcagcatggcagggagcagagacctgaaggactgtgaagtctgtgagctcagtctgctctacgcggagctggagctggagctggagctggagccggacctgagaggggcggccacggcccgcgctctccacatactgacccggctggctgagcacggtccctatgggccctacgccgcacaggtcccggccgttcacgttctgaaagcccggaaggcgtacgaacacgcgctgcaggactgtttgggtgggagctgtgtctccgatccagctgccgccgattccctgcaccgcctggttagcgtggttaaatgctttatgctcttccagtatctgaccgtagggatcgatgcctctgtgcggatatacgagcaggtatttgcgaaactgaagggctccgtttccccagacggcccaggcctggagggcagtgccagcgcccagagcgtgagcggtgctcttgaggccgtcacactgatgcacacgagcctgctcaggttccacatgagagtcggggtctaccccctggctcctctgcgacaggcgctctcggaggctttgaagttgtatccgagcaaccaggttctgtggaggtcctatgtgcagattcagagcaagtcccacagtgccagcaagaccagaagattctttgatgccatcaccaggtctgcgacacccttggagccttggctgtttgcagttgaagctgagaaaatgaggaagagactggtggaaacggttcagagggtagatggcagagaggtctacgccacaatccctgagaccggcttgacgcaccgcatcagagctctgtttgaaaacgcgatccggagtgacctcggcagccagtgccccttactatggagaatgtatctgaattttttggtctctttaggaaataaagaaagaagcaaaggtgttttctacaaagcacttcagaattgcccgtgggccaaggtgctgtacctggatgcagtggggtacttccctgatgagatgcaggagatcctggacctgatgaccgagaaggagctccgcgtgcgcctgccgctggaggagctggagctgctgcttgaggactagtccggggagatgcctcccctccgtgtcgcctgcccggggggccaggctgagcccgaggacaggtggtgcagtgtgcgtgtcagcggacctctgcctttgaagtttctaactaatttgtgtctgggttatcggtctcacctcttgtacattttttggatgtgcaaatgacacaaagttctcagtttacatattatatatgcaaatctgtgtatgtatgtacatagaggagtcaggccaagtggtaactaaaccgtcatcgttgttttgttcgctagccagcgccagccccgccgcagtgcgtgccccctcagatggcatccaaggtggtggtccttgccaaatttcttgggttttgcagtcatgataagaaaggtctggttactcacccccaggatctcctcccccgggccagctactagatttcaccctgatcttcagagcagtgtggcgtcatttaaaacttggtgtttggcctgtatcaaggtatttagtctcttactccctgagccttacacagtgatgctgccactgtggcccacagcttcagcggggagcctgttaggagggcaggctgcagcccgcccagctctgctgtcagaatctgcgctcagactccaggggcttgtgtgcatgtgcgtggaaagctgtctgaagaaacctgagccctgtggcaggaagcccgccagccaccaccctcagcagctcctcccatcaggctcccctgcctgtgaggcggtaggcgtggaggctacagaaacaggacaaactgcttgagaaagagctggctttactggg
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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