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2024-11-19 20:44:53, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XR_010405302            5221 bp    RNA     linear   MAM 25-APR-2024
DEFINITION  PREDICTED: Mirounga angustirostris NRDE-2, necessary for RNA
            interference, domain containing (NRDE2), transcript variant X5,
            misc_RNA.
ACCESSION   XR_010405302
VERSION     XR_010405302.1
DBLINK      BioProject: PRJNA1100993
KEYWORDS    RefSeq.
SOURCE      Mirounga angustirostris (Northern elephant seal)
  ORGANISM  Mirounga angustirostris
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia;
            Pinnipedia; Phocidae; Mirounga.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026991717) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_029215605.1-RS_2024_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/19/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5221
                     /organism="Mirounga angustirostris"
                     /mol_type="transcribed RNA"
                     /isolate="CCGP_5_RB_7025"
                     /db_xref="taxon:9716"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="whole blood"
                     /dev_stage="adult"
                     /lat_lon="37.114554 N 122.329689 W"
     gene            1..5221
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 mRNAs, 2 Proteins"
                     /db_xref="GeneID:123861858"
     misc_RNA        1..5221
                     /gene="NRDE2"
                     /product="NRDE-2, necessary for RNA interference, domain
                     containing, transcript variant X5"
                     /db_xref="GeneID:123861858"
ORIGIN      
cttcccagagtgcaccgcgagcgcgaaggcctcactaccggcgtccgctcgccggcgccatttctgtcgaggggaacggcagtgcggcctgtgatcatggcgctgttcccggcctttgccggtattggtgacgctcccaacagcggcagcgcccggaaagaattagattggctgagcaacccgagcttttgtgtcggagccataagctctctgagccaacaacctgaagaggctgccgctctggtttctgaagggtcaccgctgacgaggagtcctctgaaatcagagccttcagatgaaagtgatgctaacggaaagcccaaacaaacaagcagaaaaaagaagaaagagaagaagaagaggaggaaacgtcaccacaagaaaaccaagagaaaacgtgggcaggccagtagcagtggctccgagccggatagtgagcctgaagaggacaaaacttccagaagccctggagatagtagaagggaatcggagaaacccagtcaagaaggtaatgctgccgctgatattgggcatcgctttgtttggcttgaggacgttcaggctctgactggagaaaccttcagaacagataagaaaccggatccggccaactgggagtataagtctctctaccgaggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaagcagtgtatatcctgggagagggctgccgcagaaaagaagccttcacacaagcgtgttgagcgctattttacgaagaagagcgtgggcttaatgaacatggacggagttgccgttggcagtaaaaccgaacctccctcgtctgagccgatctcgtttatccccgtgaagggctcggatgatgtggttcctcccgttacgacctggttgaaccctctggggatttacgatccgtccaccgcgcagtggttacaaggacagggccctccagagcaagaaccaaagcagccagactcccagacagacagagagcgcgcgctgctcaaggccaaggtggaggagttcaacaggagagtgcgggagaaccctcacgatattcagctgtggatggcgttcgttgcttttcaggacgaggtcgtgcggagccccggcctgtatgccctggaggcaggggagcaggagaagcggaagaggtctgcgaagctggtgctggagaagcagctggctgtcctggagcgggccatcgagagcaaccagagctccgtggagctgcagctggcccggctgaagctgtgcgccgagttctgggagccctcggcgctgctcagggagtggcagaaactgatctttgtgcaccccaacagtacggccctctggcagaagtaccttttattttgccaaagccagttcagcaccttcaccgtgtcgaagatccacggtctttacggcaaatgcttgagcactctgtccgcggtgcaggacggcagcatcctgtcgcaccccgccctgcccggcaccgaggaggccgtgttcgctctctttcttcagcactgtcacttcctgcggcaggccggtcactctgagaaggcgatctcgctcttccaggccatggtggacttcaccttcttcaagccagacagcgtgaaagacctgcctaccaaaggacaggtggaattctttgagcccttctgggacagcggggagccccgggctggggagaagggcgcccgaggctggagagcctggatgcaccagcaggagcgaggcggctgggtggtcatcagtccagatgatgatgatgacgaaccagaagacgaggaccaggaaataagagataagagtctgcccaggtggcagatctggctcgccgccgagcggtcccgagaccagaggcactggcggccgtggcgccctgataagaccaagaagcaaactgaagaagactgtgaggacccagagagacaggtgctgttcgatgacattgcgcagtctctgatccagctctccagccgggatcttcagtttcagctggtcgcggcctttctgcagttcctgggcgtgccttctggcctcagccccccggcctcctgcctctacctggccatggacgaggacagcatcttcgataacgggcttcatgatgaaaagccattgacttttctcgacctgtccttttccggcgtcagctgtgttggccgctcagacccactgggctgccgtcgctggacccgcgggcacaatcgagagggcgaggagttcatccgtaacatctttcaccttgtgatgcctctgttttcaggccaggagaggtctcagctctgcttttcctggctacggtacgagatggcgaaggtcgtttggtgtctgcacactaaaaacaagaagaggttaaagtcacaaggaaagaactgcaaaaaacttgccaaaaacctcctgaaggagccagaaaaccgcaacaacttttgcctctggaagcagtacgcacatctggagtggttgctcggcaacaccgaggacgccaggaaggtgttcgacagggcgctcagcctggcggggggcggagagccgcggggctgcgagccctgggagctcggcctgctctacgcggggctggagctggagctggagctggagctggagctgtcgccggccgcgagaggggccgccacggcccgagccgtccacatactgaccgggctggcggagaatggtccctacgcgccctactccgggccggtctcggctgttcacgttttgaaggcccggaaggcttacgaacacgcgctgcaggactgtcgggggcagagccgtggcgctgggccgcctcccgccgacgcctctcaccgcctcaccggcctgctcaggtgcttcatgctcttccagtacttgaccgtggggatcgaagccgctgtgcggatctacgagcaggcgtgtgcgcagctgcagggctccgtctccgcgggcggctgtgggccggacgagcccggctgcgcgcagagcccgggccgcggcctcgaggccgtcgcgctgatgcacacgagcctgctgcggttccacgcgagggtcagcgtgtgccccgtggctcctctgcagcaggcgctctcggacgccttacggtggtaccccggcagccaggttctgtggcgggcctacgtacagcttcagagtaagtcccacacggccagtaagaccagaaggttcttcgatgccattaccaggtctgccaaacccttggagccgtggttgtttgcgattgaagccgagaaaacgaggaagaggctggtggaaaccgttcagagggtggatggcagagaggtccacgccacaattcccgagaccggcttgacgcatcggatcgaagccctgtttgaaaatgctttgcggagcgacaacggcagccagtgccccttactgtggagaatgtatttgaactttctggtctccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagcacttcagaattgtccttgggcaaagacgctgtacctggatgccgtgggccacttccctgaagagatgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccgtggaggagttggagcttctactcgaggactagagaccaggaggtgttcaacagtccctgccttcagggcctcgtcgcctgcactgctggagccgggatgcagcagacggggcacgtgtaaacaactagagctgtggcagccaccctgggaactttagggctggaagaccttgacccctttgatagtgaggacgtgggcacagggccaagcagtggcatcaggacacgggcagctagaggcagagcccataaaggaccaagcttaggcctgcaggggggagggggaggaggctgctggtgagtgacatagaagacttagttcaagtgggaaggaggacaaggcactaagctttgaaacaaaacgtggcaggaggaggggtagatgtgggggctcagaagcatggacttctccctgatactaccagtgagaggtggtgaacggaagacgaaaaggacctcctaagcggatggcctctgagtccaggagcagccacggccagccgctgggacacttcagtagccggcaggatcaccgagccaggctcttcctcctccggacggcctgtcaccctgtgcctcgccccgcattggcccctggcagtgcacgtgcaccaaaggcggcccccagctgcagctccagccccgctatgtgctcaactcccagagctcctgcggccttgggctagtcactggcctctctgaatttcctggcctgtaagatgatgagctgcaaaagctccacccctctgagttcagtcgtctcccagtgcctccactgtgggcaatcctcagtgatgccttccttcaaataactgtgcttcctctggaatttacatggcagtgaactgctaagtcctggactgtacaacttattcaggtcagctaattgtataatgaaccaaatgtacatttttacctgcatctgttcatccaatattctattcattcagtacagtggaccagagaatgaacccaatctgaacagcacagaatagcttttaaatctgtggttctccaccgtggctctgatacccggccacacttcagatgaacaacagatcagaatttttagggatgggagcaggcatcggtattttttaaagctccaaagtgattccaatgtacagccaaggttgagcatcccggcttattctgtgtcttatagtctatttttaatagactcacattactcttaatgaatacttgaaagtcttatgttttacagcatataaatctaatatatttaagtacagagaggagtcctaagaaattataaatgcattcacattgagcaggcatttggggggtggggtttacctactggtgcttattttttgttgcaattcctactattgtttttaacacattaaatctattaagtctacaatttcaagtccaaggcaattcagttttttagcatctactatacagataaatacacttttatgtaataggtacatttccatatttactcagaaaacgtccaaaatgtttagaaaacgtccaaaatgtttagaaaaccttgttttaaactaaggtatggtggcatccttactcaagaattaaataattataacaaactaatgcacagctcaagagattagctgaatgcccagaaagtgtcaaacaccgagcatacgtacct
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]