2024-11-19 20:45:20, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XR_009745169 3454 bp RNA linear VRT 14-DEC-2023 DEFINITION PREDICTED: Pezoporus flaviventris NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_009745169 VERSION XR_009745169.1 DBLINK BioProject: PRJNA1049385 KEYWORDS RefSeq. SOURCE Pezoporus flaviventris ORGANISM Pezoporus flaviventris Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Psittaciformes; Psittacidae; Pezoporus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026892584) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_033815535.1-RS_2023_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3454 /organism="Pezoporus flaviventris" /mol_type="transcribed RNA" /isolate="CSIRO_AGI_PZ_B2104156" /db_xref="taxon:889875" /chromosome="Unknown" /sex="female" /tissue_type="kidney" /dev_stage="adult" /geo_loc_name="Australia: WA, Perth Zoo" /collection_date="2021-04-21" /collected_by="Perth Zoo" gene 1..3454 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:133274503" misc_RNA 1..3454 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /db_xref="GeneID:133274503" ORIGIN
ttgccccgccggcccgcgggtcagttcgggcagacagtactgacagtaagctgagacatggcattgttcccggcttttgcttgtgccgccgaacccggggagccctcaaccagcagcggcgagggctccaggaaagctgcagaattggactggcttagtaaccgaagctttttctcagaagatgcgctgttattgcatcagcgtgctacagaaggtgggaatcttacccgtgaaaaatcaccactactgacaaggagtacatcaagatcagagttgtcaggggaaagcgatacagatgagagtctgaaacagtcaagtaagaaaagaaaaaaaaaaaagaagaaaaagcatcaccactataagaaggcaaaaaagaaaaccagaggggactccagtaacagtgaatcggatgtggacattaaggacatcaaggacaaaggtgcaggaggtggcagaaatcaaaaaaagggagcagcagcaaatttagataagaaaacatcaaatcctaccagcagtcgcattgtttggcttgatgatatccaggcttctaccaccgaaaccttcataatagacaagaagccagacccttcaaactgggcctacaaatccctgcatcaaagggacataccaagatataaaaggaaaggagagtcctgtcgcggcatagatgccaagaagcagtctgtaactttggacagttctgcatcaaaaaagaagcaatcacagaggcaacctgagcgttacttcacaaaggacaatgtgaagatgctgaacactgatggtgtgcctgtttgcagcaaaatttctccatctggcccaactacttttataccaattttccaagtggaaactgatgatccttcagacacaacggagttaaatcctctggggatttatgattcatcaactttacagtggctacaaggaaaagggtgcaagagtgcagactgtgagcctgaaactacacagcagacaattcaagagcctgggataaacattaagtctgaactaatgacaaaagtggaagaacataacaagaaagtcagagaaaacccaggagatattaatgcttggatggaatttgtttcttttcaggatgaattgatgggaggacctggcccttatgccagtaagggagagcaggaagtaagacgaaaatcactgaagtttatcttagaaaagaaactagcaattttggagagggcaattgaaagcaatccaagtaatgttgatctgaaacttgccaggctgaagatttgtgcagaattctgggagccaccagctttgatcaaggaatggcagaagctaattttcttacatcccaatagtccagagctgtggaagaaatatctcctgttctgtcaaagtcagtttactaccttttccgtttcaaaaatcaatagcctctacggaaaatgtttgactacattggcagctgtgcaggatggcagcatggtatcacatcctcttctgcctggtacggaagaagctatgctagctatatttgttcagcagtgccactttctgagacaggctggtcattctgagaaagcagtgtctttgtttcaggctctgattgacttcaccttctttaaacctgacagtgtaaaagatctgccaacaaggggacaggtggaattctttgaacccttttgggatagtggagaaccacgaattggagaaaaaggagcaagaggctggaaagcatggatgcaccaacaagaaaagggtggctggattgctctcaaggctgatgatgatgatgatgatgaagagatagatgaggatcaagaaataaaggataaaactcttcccaagtggcaaatttggttggatattgaacattctcgtgaagccaggcattggttaccttggaggccagacaaaaacaaaacagaagctgaagaagattgtgaagatccagaaagacaggtcttatttgacgatcttggaccatctttaatccagatttctaatccagaccttcaacgtcaaatactgtactcatttttgcaattcctgggagttccatgtacaaggaagctctttccttccaacctctatattgccatggatgaaaataacatctttgacagtgtgctttctgatgaaaagccactcacttctgttgattttccactttctggattcagcagtattggtcatatgaacacaatgctacgagggagacatcacataggccactacaaagaaggagaggagttcatacagaatgtttttcatgttctgtttccgctgttttcaggaaaggaaaaatgtgacctgtctatttgttggcttcagtatgaaatatctaaggtagttcagtgtctccaaggaaaaaacaaaaagaagctgaaagcgcaagggagaaagagtaaaaagttggccaagagtctccttaaagcacctgacaaccgaaaccacctttcgctctggaagctgtatgcctacctggagtggctgcttggtaacattgatgatgccagaaaagtatttgacacagctctttgtgcagctggagcagaaggattgaagagtccccagctctgcagcctcagtctgctttatgctcagctggaagttgaaatactagaaagtgtagaagtagctgttatgtcacgtgctgctcatatattgaccacattggctgagggtggaccatatgtgccgtatagtggacaagtgttatcagtgaatatgttgaaagctcgtaaaacatacgagagagcactgcaagatcatttaagtaaaacgccagtttctgatcagggtcagggaagtgatgctgatcagctggttaacttggttggttgttatgcactgttccagtatttgactgttgggattgatgctgcagtattgatatatgcacagacttcagaaaaacttgaagtttctggtccacagaaaggtgaaaataatgaagagaattctggcattcagaatcttcccactgctctcgaaggtgtcaaactgctgcatacgaatttactgagattccacatgaaaatcagtatttatcctttgaatcctctgcgggaggcactaacggaggctctgaaatggtatcctagcaaccagtctctttggaggtcatatatccacattgaaaggaagtctcacagtgctagcaaagcacgaagattttttgatggtgtcacaaggtctactaagtctttagagccatggctgtttgcaatccaagcagagcagatgagaaaaaaactcactgacaatgtccagagatgttggtgtagtacattctactattcctgaaactggactaacaaatcggattgtagctctgtttgaacacgcggtgcagagtgaaaatggtacccattgtccactgctgtggagaatgtatttgaactttctggtttcagtaggaaaaaaagaagagagtaaaggattattttataaagcccttcaaaactgtccttgggcaaag
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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