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Previous release (v1)
2026-04-25 22:29:22, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_003582214 5983 bp RNA linear ROD 01-MAR-2025
DEFINITION PREDICTED: Marmota flaviventris NRDE-2, necessary for RNA
interference, domain containing (Nrde2), transcript variant X2,
misc_RNA.
ACCESSION XR_003582214
VERSION XR_003582214.2
DBLINK BioProject: PRJNA1228026
KEYWORDS RefSeq.
SOURCE Marmota flaviventris (yellow-bellied marmot)
ORGANISM Marmota flaviventris
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_092499) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On Mar 1, 2025 this sequence version replaced XR_003582214.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_047511675.1-RS_2025_02
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 02/25/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..5983
/organism="Marmota flaviventris"
/mol_type="transcribed RNA"
/isolate="mMarFla1"
/db_xref="taxon:93162"
/chromosome="2"
/sex="male"
/tissue_type="brown fat"
/dev_stage="adult"
/geo_loc_name="USA: Gunnison County, Colorado"
/lat_lon="38.718100 N 107.199200 W"
/collection_date="2017-07-11"
/collected_by="Gregory Florant"
gene 1..5983
/gene="Nrde2"
/note="NRDE-2, necessary for RNA interference, domain
containing; Derived by automated computational analysis
using gene prediction method: Gnomon."
/db_xref="GeneID:114089629"
misc_RNA 1..5983
/gene="Nrde2"
/product="NRDE-2, necessary for RNA interference, domain
containing, transcript variant X2"
/db_xref="GeneID:114089629"
ORIGIN
gcaggggccatttccgtagagaggaacggcggagcggcctgtgtccatggcgctgttcccagcctttgcgggcgttagtgaggcccccgatggtgggggttccaggaaagaattagactggctgagtaacccaagtttttgtgtcggaactgtaactaccctgagccaacaaactgaagaggccacagctcttgtttctgaagggtcatcaccaacaaggagtcctctgaaatcagagccttcagatgaaagtgatgctagcagaaagctcacacaaataatcaggagaaagaagaaggaacaaaagaaaaaaaggaagcatcagcaccacaagaaaaccaagaggaagcaccggcagtcgagcagcagcgagtctgagccagattctgattcaggaaaggacagatcttccaggagcatcagaagcagccagaagcaagctgagcaacccaatcaaggaaataatactgctgctgatgctggacttcgctctgtctggcttgaggacattcagtctctgacaggagaaaccttcagaacagataagaaacccgatcctgcaaactgggagtataagtctctctaccgaggggatattgcaagatacaagaggaaaggagactcctgcctgggcattaacccgaagaagcagtgcatatcttgggaaggggcttcctcaacaaagaagcgtgcgcacaggcacgttgaacgctattttacgaagaagagcgtggggttgatgagcgttgatggcgtttctgttagcagtagaactgatcctccctctgcagagccggtcttgtttatccccgtgaaggacttggatgatatggcttctcctgttacaacctggttgaatcctttggggatttatgatcgttcaaccacacagtggttacaaggacagggtccttcagaagcagaatcaaagcagccagagtcacagctggacagagagaatgctcttctcaaggcaaaggtggaggagtttaataggaaggttcgggagaaccctcgggatattcagctgtggatggcatttgttgcttttcaggatgaggtcatgaggagtcctggcctgtatgctatggaggaaggagaacaggagaagagaaagaagtccctgaagctcatcctggagaagaagctggccatcttggagcgggccattgagagcaaccagagcagcatcgatctcaagctcgccaagctgaagctctgtgcggagttctgggagcctgctgcgctggtcaaagagtggcagaaactggtctttttacatcccaataacacggtcctttggcagaaataccttttgttttgccagagccagtttagcactttttcaatatcaaaaattcacagtctttatggaaagtgcttgagcactctgtctgctgttaaggatggcagcatcttatctcaccctgctctgcctggcatagaagaggccatgtttgcactccttcttcagcagtgccactttctgcggcaggctggccactcagagaaggccgtgtctttgttccaggccatggttgacttcactttcttcaaacctgacagtgtgaaagatctgcctaccaaattacaggtggaattctttgagcccttctgggacagtggagagccacggcctggggagaaaggagcgagaggctggcgagcgtggatgcaccagcaggagcggggtggctgggtggtcatcaatccagatgaggatgatgacgagccagaagaggatgaccaggagataaaagagaagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagatcaaaggcactggcggccctggcgccctgataagaccaagaaacaaactgaggaagactgtgaggatcccgagagacaggtgttgtttgatgatattggacaatctctgatcaggctttccagccaagagcttcagttccagttgatcgaggcctttctgcagttcttgggtgtgccttctggctttgtccctccagcctcctgcctgtacctggccatggatgagagcagcatctttgatagtggactctgtgatgaaaagcccttgacttttttcaacctttcattttctggcattagctgtgttggctgcatggaccggttgggctctctccgctggaccaggggtcacaatcgagagggcgaggagttcattcgcaatgtcttccaccttgtgatgcctttgttttcgggcaagcaaaagtctcagctctgcttctcctggttacggtacgagattgcaaaggtcatttggtgtctgcacactaaaaacaagaagagattaaagtcacaggggaagaactgcaaaaaattagccaagaatctccttaaagagccagaaaaccgtaataatttttgcctctggaagcagtacgcacatctggagtggttgcttggcaacatagaggatgcccgaaaagtttttgatacagccctcagtatggtgggcagcagcgagctgaaggaccgtgaactttgtgaactcagtctcctctatgctgagctggaggtggagctgtcactggacttgtcaggggccaccacggcccgagctgttcacatactaacccgactgacagagagcagtccctacgggcccttcactgggcaggtcttacccactaatgttttgaaagctcgaaaggcttacgagcatgcgctacaagactgtttgggtaagagctgtgtctctgatccaactcctgctgactccttgaactgcctgagtagcttggtcaaatgctttatgctgttccagtatttgaccgtagggattgatgctgccgtgcagatatatgaacagctatttgccaaactgaagggttctgttttctcagaaggctctggcatggaggacggtgccagctcccagaatctgaccagtgttcttgaagccatcacgctgatgcacacaagtctgctgaggttccacatgaaagttaatgtttaccctttgactccgctacgagaggcgctctcggaggctttgaggctgtatcccggcaaccaggttctttggaggtcatatgttcagattcagaataagtctcacagtgctagcaagaccagaaaattctttgatgcaatgaccaggtctgccaaacccatggagccgtggttatttgcaattgaagctgagaaaatgaggaaaagactggtagaaactgttcagagggtgggaggtagagagatccacgccaccatcccagagaccggcttaacacatcggatcagagccctgtttgagaacgcagtgcggagtgaccacggcagccagtgccccttactgtggaggatgtatttgaattttttgggagaggagaactgtggtgccccgctcacggctgacacgggagctgctccagggaggctggcctccatgttccttacgtgtgcgcgactcggctctgggggctgagggtgaaggaagggggcgcctctgtgtgagccctgtcctgcccctctgaagactcattggcaggatcaggatgtgcacagagatggtaaagtgtgaccatttgcccactgcataggatgccagtcgctgaaacaaattttcaaaagagttattcacaaggcagctgagttggagtaggaggccacacatctccctgcctgagggtaggtgtgttggatatttatggggtaaagaagcagggtgatctgtggtgtggggagaatgattggaagatgaagtaatctgtgtttcatgcacatgtaatgaaacttcatggctctttatgagacacatgtacagaaaacagaggtgcacgatctgaagaaggtagagattttggccctctgatggcaaaaggtctctactggacacctgcgcaggcccaaatgaagagttggtggtttcaacaaatttgccaagtccctgaaaagtaacctaggcagctgttacaatcatgacccacgtgtcagaggtgtcatctgtagctcagcttgtgagagactaagaatatatagctcagctccgtgacctccagaattagtgatctgtaaagccagtaaaaatcaggtaactaaagtgggaaaggggcttcagagagaagtacaaagcgtcggttcacatatacgaggctaggccagccacgtttgttaattatcagagttaagattccagtcttcatggagtcttggagactgaggtgagggttaccttcccaacagtggctctcagtttcttgggagatgcttctgactggcaaaaggtagatatttataactgggatcctctcttttagtaaatgcccggcagatggttggccccggtgagcaagagcagctctcttccttcatcagctctgtcttctttggttccatgcagagactcagttggtgccctcaggtgctcctggcttgcctgaggacacacatttacccagtcataataccgtgggggtgacaggagtgtcacagaaactccagaaaagagtgtatcacccccccagttatgtttcattcctgaaggaatcttacaaggagtcttgggtgttaagatgacatttagatggtgatagagggaccaggagagctggtagtggccatggactcttctctcacttgaggcttgctctacccacaggtgaaggcatgtccaaggccgtgtcttagaatacaaaatcatgggtagaaaacacatggtcaccactgagttctcacctggcatcaagctcttccacccctgatgcagaaaaggacagtgttttcctgtggcctgttgatgaaggaaatgccactgaaaagagtatagtggtttattgggctccaggattctgcacttggtagaagacatagtaatatagtttttcttattctttcaaaaaggaagaaaaggttcagtttagtcaggagttaggagaggacattgacgcatactgacgtgggaaggagcacaccggctgcttagttgtgaattgagtggcccagcctcagaactggaggcattcagtagaaaggacacatgggagtctcctgagccttgtggctggctcttggagacgttgagccttgcccaaagcagggttctcatagatgttgttacagtccaagctgtagtcccttgtgaccgtgggagtgaaccttcaagattgaaaaatggagttcccgagcagcagtttggatctctggatgctgcagtccaggtttccaggagcccagtcattagctcttccttctctgctggctgcagcatgctggctgtgtggctagggagagccagtgtccactagaacacgatcctgagggagcaggctgggtggacaagcacagagacagacttgagctcccggggctctgctcacgccagccagcaggtactgtcctgggtagctggcttcccaggaaggtcaggagaggtccccagcaatggctccttccacactgggctggaaacacagtggtggctgactttgagatgaaggttttagatctagagagaaggccggctgagaacctgcacacactcagactgaaatttctgatggaaaaatttaataaggtgaaatctggcaaatggggtaagctattggagaaatgagatagtcctgattatttcatttctctaaaagacagctttcatccagtggcacgtactaaagcaaaggtttttttcatttgcacaacttatcaagttcaccagcttcatcttgcagatgcagaatgaggcaggtggttcccagtacaggagggggaacaggattgctaataaaagtgctcagcatcaacatggggccatttgaagagggaaatgtctaccacatagcaggggcctagagagcatcttctggtatctgggcgcattcccttcagccaccgtgatggtaccgggccatccacagagcctgcctacgcagctggggctgtatgccatgcttccttaggaaacaaagacagaagcaaaggtgtgttctacaaagcacttcagaattgtccctgggcaaag
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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