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Previous release (v1)
2026-04-25 22:29:53, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_078001708 6010 bp mRNA linear PRI 09-DEC-2025 DEFINITION PREDICTED: Macaca mulatta claudin 22 (CLDN22), transcript variant X1, mRNA. ACCESSION XM_078001708 VERSION XM_078001708.1 DBLINK BioProject: PRJNA1254774 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133410) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049350105.2-RS_2025_08 Annotation Pipeline :: NCBI Eukaryotic Genome Annotation Pipeline (EGAP) Annotation Software Version :: 10.5 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/25/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6010 /organism="Macaca mulatta" /mol_type="mRNA" /isolate="MMU2019108-1" /db_xref="taxon:9544" /chromosome="5" /sex="female" /tissue_type="cell line" gene 1..6010 /gene="CLDN22" /gene_synonym="claudin-22" /note="claudin 22; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 505 long SRA reads, 14 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:701348" CDS 5063..5722 /gene="CLDN22" /gene_synonym="claudin-22" /codon_start=1 /product="claudin-22 isoform X1" /protein_id="XP_077857834.1" /db_xref="GeneID:701348" /translation="
MALVFRTVAQLAGVSLSLLGWVLSCLTNYLPHWKNLNLDLNEMENWTMGLWQTCVTQEEVGMQCKDFDSFLALPAELRVSRILMFLSNGLGFLGLLVSGFGLDCLRIGDGQRDLKRRLLILGGVLSWASGITALVPVSWVAHKTVQEFWDENVPDFVPRWEFGEALFLGWFAGLSLLLGGCLLNCAACSSHALLASGHHAVAQMQDHHQLETRNTNLKN"
misc_feature 5090..5578
/gene="CLDN22"
/gene_synonym="claudin-22"
/note="PMP-22/EMP/MP20/Claudin family; Region:
PMP22_Claudin; cl21598"
/db_xref="CDD:473919"
polyA_site 6010
/gene="CLDN22"
/gene_synonym="claudin-22"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
aaaccacacccagaggagaataaaggagtcaactaagaggcaagccagccagtgtccggctgcggtttcccaacgccatgagactcactgcagggagccttgtacctcacgtgtgacacacagtggtcaccgcaaaatggtctcagaaaagccaactatgtcaggaatggaaagaactttccagaaaggaagagaatatggccatttccttcaagaacttcctccaacgggaagcagggacagcagacgtataatcagccatgagtcatagtaccaagaatgaactggatctgagggaaacttggcaagaaacactgcctctggatccagcctcccagccgcagccccaggtcgagcaggtgggccggaaccacggtcgctgaccagggtatctgatcctctcagtctgaaggaaagtgagacctcagcacaaacgccatggatgacacagcatgggagggagcggcccagagagagaagcaccaagcacttgatcatggaggaggaggaggaagagtgggatccatgggcaggcaagacctttccatggcacaaaaaacaattttagaagtatccagttgtataaagactggaaaagggcatctgtttcagccggtggaccacaacaaaccacccacccacagatgaaacgcactttcacagctgcctctgaagatgggtttgaaaaaccaaatacaaaataaaaatagcaactctcatttattgagagcctactatgcattgagagactttccagtgctatgcccaatctcaccatgtgaatgctggcacagtgactatcactattttacagacgaggcgacaggctcagagaagtcaagttgcctgaggccacataggtttaaggagcggagtcagaatgtgaaccctggtctttccaatctcagagcccaagctcttccatttgcattaaattcatctttaatttatgggaaagtttcatcctcttgggggagaaatccatgtaataattctgaaataagaccatttggactttcaaaggcccttttacctcaactgggtaaaatagtgtcccctttgaaggagtttcacctgtgggctctgcagttgggtggggaaatctgttgactttgggagcagcctctgaactggaaacaggagtattacagacaacaaggagatacatatacacatatatttttttgagacagagtctcgctgtctcccaggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctcccaagttcacgccattctcctgcctcagcctcccgagtacctgggactacaggtgcccaccaccacgcccagctagtttttttgtatatttttaatagagacggggtttcaccgtgtaagccaggatggtctcgatctcctgacctcgtgatcgcccgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcacccggccgacaacaaggattttatgaaagagaaggccatgacacaaagtctcacggcaatcccataatttcctttgcagaggaatttaagagagaaacctccttgagacgcggttagtgcaccgttttcaaaaaacctgaatggaataacctgttgagagagcaaagagctcctgcgtttgtggcacacgggagcctggcagcagcaggtgtgtgtcagcgggggacccaaggcaggcctcccctccacagcccctcccacaccccagacttagccatgctggtgccggacatcctgtgctgcttcgagttgtaacttcacatcctccagagctccaggcagcactaaagcctctgggacgcggtcagctgcttagatgggttcccaggaaggttcactgttctggaaaggtctgtaagcatgtgacctgagctccttgaggttcagggggctggtctgaccgaagcagagttttccctttcccagctcaggagggattttcccagttctccctgtcgagtgtctgagggtagtgactcggccaggctgggggctgcaggtcccggaagcccaaggcatggatgcttatgggtgttcaattgatgtctttcccatagttggtttcatttaggcattgaatatgtattttctgccaaactcgattacacctcaagctccatgaaggcagggaccacgactgctttgttaactgtgtacccagggcctggccccgaggctggcactagatgcccaacaaacgcttgtggaatgcgtggccaacaccttagcttttctacagttggtctttctgtttaaagagaaagaacgaaagtgacgggattgacactgcgttctatgtaaatgctgctccatggagttgtgcaacatcagtgctccaggtagaaaggcacacagcaaagctgactcaggcaatggtacaagttcaagttttaacttttgtgcccagaaagtcctcatgtttctactcctggctgggcctgggatggtcccaaagtcttcaggttgatgtttctttaaggtcgttctcggaagcaggaccagagtcctgttcatgaagtccagggctccctgcggtggtcccctgattggacccacccatggccctgcctgtgctcctgctatatctacccagggccaggcgtttccatcttacaccttcccctctctgccagctctcagcatgccttccaggacgtggctggtgtttggctaatgtttgcatggagttcagtctctctcctggagaaaagggcagatattctgatggctggggcaccagctggggctgtggattcctgctaaaacccagcagcgcagccgaggggaaggagccctggaatctgagtctggaggccgggtcagagtcttgacactgatcctcagctcactagaaaatgaaggcactgtgatgcctgaggtgtcggctgcctctagggttccgtgagtctcagagacccacctcttcaagagtaggtgccaaggctgtcactgatttgcaatgattttcccatgtgttaactggaaacttaaaggaaacattagccatgagggttgggagcttagattaatatttagaaaggatttacaaagaaaagaacccagttaatcccaagatagaggtcttttcatttctatttgtgcagtgggtggagacggagtccctggctcggacagttcccacagccttccctgtaaagcccctctgtggtagcagtttctaactttacagtcacaaagccagcatgtgcttcccatggctttggcccccactgctggcagatggattcagggttctgactctggcccgaggaggaggcacagtgcttgccaagtgagtgccaactttagcaagcaaagcttcaggacaaaatggagaggcaaccatgacaatggtctcagatcactctttatggcataaaagattaaggggtggactttggtgtgagacaggcttcattctttgaactattgtttggcaaactaattggtttacttaagcctcagattccttatctgttaaatggagataaagatggtgtctatatcagacagttcttgtgagaatacgataacacagttaaagctcttaacctaatgcctagcaagcagtaagtgcttattaaatactggttattattattatgcttttgttacggtttgaatgtgtcccctaaagttcatatgttggaaacataatcctcagtgtttagaggtggggccttttaagaggtattaggtcaaagggctctgtactcagggaggacttaatgcttttgtcttgggagtgagtgagcgtgagagtgggtggttaaaaaagtgagtttgggtcccttttgccccctcactctcatcctttcttgcccttctgccttgagccatggcatgacgcagcactgaggccctcaccagatgccaatgccatgctcttggacttgccagcctccagaactgtgagccaaatacatttctttttctttctttttttcttcagatcagacggttaatgtgctgacattgtaacaaggtttgagggtggcacatctcacgcatgcgtgtgaacacccaatcatcatgctcacaaactacaaaaggatcatgccaaatacatttccggtaaattacctagtcttaagtattccattatagtagcacagaacagactgagacacgttatcctggcctctgtcccttggttgttgcatgacaggatgttcccttcactaccgagagccgatgtctcctgttatttcttaggcattagtaccttgacagtttggcataaaatctcagttagggcctcagaagacagagacacgagataactaggctttcagaaacacttcacctccacccactcagctatgaaaagggtttgtttcctgctcctggaaatccacacattcctccttgccagtgtacacacaggcagagatcaagtgaatattgactagggttcccctccttcctctcttaaatgccgtcacctgaatcggactgagggcaccccggagtcactcacagcagagtaattatgtggaggcaacacatcctgtctatgtcttcagacccccaccctctggactgggagctattgggcagcagcaatgaggccttctgcaggggtctgcacacacccctccagatctgtcctggcgatggtctgctgggcggaaccccttccaccaccttcttccattccattcacccctgaatgtcctgggcaaaacgtgtcaggccacggggaggaactttctgctggtggttccctaaagatcctctgatgtaggaagccactactgcctggaagtttaaagtcccagtttccagataagtacgagtttatacttgtttatatattttttccttagagtctctggttggttttttttttttttttcctccaatgggcaagaacttggacttttttaaaattcttttttctttccccaaatgctttgatgaaagcttcaggagcattcaactaatagattggctggtaatgacaaaattaaatacatcaattcaagtaactgcaaccgaaggacaggagtttgtttggttaaagctctcaggacattataatggctttagtatttagaactgtggctcaactagctggagtttcattatctttgctgggatgggttttatcctgtcttacaaactacctgccacactggaagaacctcaacctggacttaaatgaaatggaaaactggaccatgggactctggcaaacctgcgtcacccaagaggaagtgggaatgcaatgcaaggactttgactccttcctggctttgcctgctgaactcagggtctccaggatcttaatgtttctatcaaacgggctgggatttctgggcctgctggtctctgggtttggcctggactgtttgagaattggagacggtcagagagatctcaagaggcgactgctgatcctgggaggagttctgtcctgggcctcgggaatcacagccctggttcctgtctcttgggttgcccacaagacggttcaggagttctgggatgagaacgtcccagactttgtccccaggtgggagtttggggaggccctctttctgggctggtttgctggactttctcttctactgggagggtgtctgctcaactgtgcagcctgttccagccacgctctcctagcttcgggccaccatgcagtggcgcaaatgcaagatcatcatcaactggagacaagaaacaccaacctgaaaaactaagccagaaaggacaagcgtctgctgctcaggagacgcttgctcaacactggatttggtaggaggtcctgctctagtcatctcactgtgcttctgattttcgaaaatgcattttttcctgtggctattaaactatagtttctttccaagactggtaaactatttttatcttctactctgagatcaaaaccaatcaagacttaatagtaatgacacccattactgtggatgagtgttctcaattttaaaacagtgattgcatagaagtggtgaataaaacgttaatctgta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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