GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-11-19 20:26:37, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_067663713             483 bp    mRNA    linear   PLN 04-SEP-2024
DEFINITION  Rhizopus delemar RA 99-880 uncharacterized protein (RO3G_09128),
            partial mRNA.
ACCESSION   XM_067663713
VERSION     XM_067663713.1
DBLINK      BioProject: PRJNA1151041
            BioSample: SAMN02953598
KEYWORDS    RefSeq.
SOURCE      Rhizopus delemar RA 99-880
  ORGANISM  Rhizopus delemar RA 99-880
            Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota;
            Mucoromycotina; Mucoromycetes; Mucorales; Mucorineae;
            Rhizopodaceae; Rhizopus.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Ma,L.J., Ibrahim,A.S., Skory,C., Grabherr,M.G., Burger,G.,
            Butler,M., Elias,M., Idnurm,A., Lang,B.F., Sone,T., Abe,A.,
            Calvo,S.E., Corrochano,L.M., Engels,R., Fu,J., Hansberg,W.,
            Kim,J.M., Kodira,C.D., Koehrsen,M.J., Liu,B., Miranda-Saavedra,D.,
            O'Leary,S., Ortiz-Castellanos,L., Poulter,R., Rodriguez-Romero,J.,
            Ruiz-Herrera,J., Shen,Y.Q., Zeng,Q., Galagan,J., Birren,B.W.,
            Cuomo,C.A. and Wickes,B.L.
  TITLE     Genomic analysis of the basal lineage fungus Rhizopus oryzae
            reveals a whole-genome duplication
  JOURNAL   PLoS Genet. 5 (7), E1000549 (2009)
   PUBMED   19578406
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  AUTHORS   Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Ma,L.-J.,
            Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M.,
            Mauceli,E., Brockman,W., Rounsley,S., Young,S., LaButti,K.,
            Pushparaj,V., DeCaprio,D., Crawford,M., Koehrsen,M., Engels,R.,
            Montgomery,P., Pearson,M., Howarth,C., Larson,L., Luoma,S.,
            White,J., O'Leary,S., Kodira,C., Zeng,Q., Yandava,C., Alvarado,L.,
            Skory,C.D., Ibrahim,A., Lang,F., Wickes,B.L. and Liu,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Annotation of the Rhizopus oryzae genome
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 483)
  AUTHORS   Lander,E., Birren,B., Ma,L.J., Ibrahim,A., Skory,C., Wickes,B. and
            Lang,F.
  CONSRTM   The Genome Sequencing Platform, The Genome Assembly Team
  TITLE     The Genome Sequence of Rhizopus oryzae RA 99-880
  JOURNAL   Unpublished
REFERENCE   4  (bases 1 to 483)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (23-AUG-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 483)
  AUTHORS   Lander,E., Birren,B. and Ma,L.J.
  CONSRTM   The Genome Sequencing Platform, The Genome Assembly Team
  TITLE     Direct Submission
  JOURNAL   Submitted (19-AUG-2005) Broad Institute of MIT and Harvard, 320
            Charles Street, Cambridge, MA 02141, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_027137832).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Rhizopus delemar RA 99-880"
                     /mol_type="mRNA"
                     /strain="RA 99-880"
                     /db_xref="taxon:246409"
                     /chromosome="Unknown"
     gene            <1..>483
                     /locus_tag="RO3G_09128"
                     /db_xref="GeneID:93616094"
     CDS             1..483
                     /locus_tag="RO3G_09128"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_067519814.1"
                     /db_xref="GeneID:93616094"
                     /translation="
MTFNPFDLFYSITVITLDYSCNYIYSRISRVLPLKKPVEENRELKDESASKESDRIVSQNRQRHSSISSCPANDTPLILSPSTSTSSLWSLDSNRSRVEEMIYLFETGNHLQKRRYSMDACYPTFIRERKFEYLPTVNEWRKRENSTTFPPIRLSTSNST"
ORIGIN      
atgaccttcaatccatttgatttattttattctattacagtcatcactcttgattattcttgtaattatatttattcgagaatatctcgagtgttaccgcttaagaaaccagtggaagagaacagagaattaaaggatgaatcagcaagtaaagaatcagatcggatcgtatcacaaaatcgacagcgtcacagttcaatctcttcttgcccagcaaatgacacaccactcattctttcaccttctacttctacctcttccctttggagtttagattcaaatcgttcaagagtagaagaaatgatttatttattcgaaaccggaaatcatctacagaaacgaagatacagtatggatgcttgttatccaacttttattcgagaaagaaaatttgaatatttacccactgtgaatgaatggagaaagagagagaatagcacgacttttcctcctattcgtttgtcgacatccaattccacgtaa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]