LOCUS       XM_067435305            1977 bp    mRNA    linear   VRT 19-AUG-2024
DEFINITION  PREDICTED: Pseudorasbora parva vimentin (vim), transcript variant
            X2, mRNA.
ACCESSION   XM_067435305
VERSION     XM_067435305.1
DBLINK      BioProject: PRJNA1148495
KEYWORDS    RefSeq.
SOURCE      Pseudorasbora parva (stone moroko)
  ORGANISM  Pseudorasbora parva
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Gobionidae; Sarcocheilichthyinae; Pseudorasbora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090195) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_024679245.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1977
                     /organism="Pseudorasbora parva"
                     /mol_type="mRNA"
                     /isolate="DD20220531a"
                     /db_xref="taxon:51549"
                     /chromosome="24"
                     /tissue_type="liver"
     gene            1..1977
                     /gene="vim"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 18 Proteins"
                     /db_xref="GeneID:137063974"
     CDS             134..1414
                     /gene="vim"
                     /codon_start=1
                     /product="vimentin isoform X2"
                     /protein_id="XP_067291406.1"
                     /db_xref="GeneID:137063974"
                     /translation="

MASSSYKRMFGGERPAMSRSTYSSRQYSSPVRTTSRVSYSTASSASPSIYISKGARVRTSAPLPRLATDTLDFGLADAINTEFKVNRTNEKAEMQHLNDRFVSYIDKVRFLEQQNKILTAELEQMRGKGASRVGDLYEDEMRELRRQVDQLTNEKARVEVDRDNMGEDIDRLKEKLNEEMLQREDAENNLRSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEELAELQIQIQEQHVKIDMEVSKPDLTAALKDVRQQYETLASRNIQESEEWYKSKFADLSEAAARNNDAIRLAKQEANDYRRQLQSLTCDLEALKGTNESMERQMREMEDNFSIEVNGYQDTIGHLEDDIRNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRVHEGNQAYDGQPVKESRDKDHRDQRWACN"

ORIGIN      

tgtcattagcatagggagtgggctataaatgcgagctgaacctctgcagtggtcttggttggtccggacagggtgcggtagttggtgaaagtagacgctgacttcaacacgaaccaagaactaaaggattacaatggccagctcttcttataaaaggatgttcggtggggagcgaccagcgatgtctcggtccacttactcgagtcggcagtacagcagcccggtgcgcacaacctcgcgtgtgtcctacagcaccgcgtcctccgcgtctccatccatctacataagcaagggcgcgagggtgcgcaccagcgcgccgctgcccagactggccaccgacacactggattttgggctcgccgacgccatcaacactgaatttaaagtcaaccgaaccaatgagaaagcggagatgcagcatctcaacgacaggtttgtcagttacatagacaaagtgaggtttctggagcagcagaataagatcttgacggcggagctggagcagatgaggggcaaaggcgcgtcccgggtcggtgatctgtacgaggacgagatgagagaactgcgacgacaagtggaccagctcaccaacgagaaggccagagtggaggtggaccgggacaatatgggagaggacatcgatcgcctcaaagagaaacttaatgaagagatgcttcagagggaggacgctgagaacaacctccggagcttcagacaggatgttgataacgcttccctggcccgtctggacctggagagaaaggtggagtccttacaagaagagatcgctttcttgaagaagcttcacgatgaggaacttgccgaactccagatccagatccaggagcagcatgtgaagattgatatggaagtgtccaaacctgacctcaccgctgctctgaaagatgttcggcagcagtacgagactctggcttccagaaacatccaggaatctgaggaatggtacaaatccaagtttgctgacctgtctgaagctgctgcccgcaacaatgacgcgatccgtctggccaagcaggaggccaatgactaccgtcgccagcttcagtctctcacctgcgacttggaagctcttaaaggaactaatgagtctatggagcgtcagatgagagagatggaagataacttttccatcgaggtaaacggttaccaggacaccattggccatctagaggacgatatccgtaacatgaaggatgagatggcgcgtcatctacgtgaataccaggatctgctgaatgttaaaatggccctggatattgagatcgccacctacaggaagctgctggaaggggaagaaagcagagtccatgagggaaaccaggcctatgatggacagccagtcaaagaaagtcgtgataaagaccatcgagaccagagatgggcatgtaattaacgagtccacccaaaaccaggatgacgaatgaaccgcatgcgtacctgtgaccagtaggggcactagagagctgaagatccacgccgagtagaacgaggaagagaacgaagtttcctttgttgtttctgttaagagtaaaaaagaaaaacagctttaaagtgcctttttttgcattgccacattagagcggtctgtaatagagctgtattagagctgaaaagacaacgttggccactgagtaaaccagctttaaccaggtttatgtttaccacgacgtctgtagtttacactgttgaagaccacagcaacactgcttcaacattttctgttttttataattattgcaaatgaccaaaaacttgatgaacttgtctctttcaccataagaataccaaactgtcaacaaatttccacaaattcaataaacctttaaaagaacaatcagattccattattttatgaacagtgtttgtcttccatttcctctgtggaaaatgaactaaacttttgaggaatgcttctctgttgcgcagtaaaaaccttccacgtcacaataacagatt

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