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2024-11-19 20:24:23, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_066102330             300 bp    mRNA    linear   PLN 26-JUN-2024
DEFINITION  Clavispora lusitaniae 60S ribosomal protein L36-B (RPL36B), partial
            mRNA.
ACCESSION   XM_066102330
VERSION     XM_066102330.1
DBLINK      BioProject: PRJNA1128260
            BioSample: SAMN11056370
KEYWORDS    RefSeq.
SOURCE      Clavispora lusitaniae
  ORGANISM  Clavispora lusitaniae
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Metschnikowiaceae; Clavispora.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Campos,J., Goldberg,B., Tallon,L., Sadzewicz,L., Vavikolanu,K.,
            Mehta,A., Aluvathingal,J., Nadendla,S., Nandy,P., Geyer,C., Yan,Y.
            and Sichtig,H.
  TITLE     FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
            Supporting development and validation of Infectious Disease Dx
            tests
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 300)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 300)
  AUTHORS   Campos,J., Goldberg,B., Tallon,L., Sadzewicz,L., Vavikolanu,K.,
            Mehta,A., Aluvathingal,J., Nadendla,S., Nandy,P., Geyer,C., Yan,Y.
            and Sichtig,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-MAR-2020) Center for Devices and Radiological Health,
            U.S. Food and Drug Administration, 10903 New Hampshire Avenue,
            Silver Spring, MD 20993-0002, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_027093978).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Clavispora lusitaniae"
                     /mol_type="mRNA"
                     /strain="FDAARGOS_655"
                     /isolation_source="clinical isolate"
                     /host="Homo sapiens"
                     /culture_collection="FDA:FDAARGOS_655"
                     /db_xref="taxon:36911"
                     /chromosome="Unknown"
                     /geo_loc_name="USA: DC"
                     /collected_by="Children's National Hospital"
     gene            <1..>300
                     /gene="RPL36B"
                     /locus_tag="FOB63_003510"
                     /db_xref="GeneID:90953605"
     CDS             1..300
                     /gene="RPL36B"
                     /locus_tag="FOB63_003510"
                     /codon_start=1
                     /transl_table=12
                     /product="60S ribosomal protein L36-B"
                     /protein_id="XP_065958349.1"
                     /db_xref="GeneID:90953605"
                     /translation="
MARSGIAVGLNKGHKTTQKDVAPKISYRKGALSKRTAFVRSIVSEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALKKVEEMTNIIAQSRRH"
     misc_feature    7..294
                     /gene="RPL36B"
                     /locus_tag="FOB63_003510"
                     /note="Ribosomal protein L36e; Region: Ribosomal_L36e;
                     pfam01158"
                     /db_xref="CDD:460088"
ORIGIN      
atggctagatctggtattgctgtcggcttgaacaagggtcacaaaaccacccaaaaggacgttgctccaaagatctcttacagaaagggcgctttgtccaagagaactgccttcgtcagaagcattgtctctgaggttgctggcttggctccatacgagagaagattgatcgaattgatcagaaacgccggtgaaaagagagccaagaagttggccaagaagagattgggtactcacaagagagccttgaagaaggttgaagagatgaccaacatcatcgctcaatccagaagacactaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]