2025-04-20 15:30:09, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_065349303 2454 bp mRNA linear INV 16-MAY-2024 DEFINITION PREDICTED: Planococcus citri visceral mesodermal armadillo-repeats (vimar), mRNA. ACCESSION XM_065349303 VERSION XM_065349303.1 DBLINK BioProject: PRJNA1108321 KEYWORDS RefSeq. SOURCE Planococcus citri (citrus mealybug) ORGANISM Planococcus citri Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Coccoidea; Pseudococcidae; Planococcus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_088678) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_950023065.1-RS_2024_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2454 /organism="Planococcus citri" /mol_type="mRNA" /db_xref="taxon:170843" /chromosome="2" gene 1..2454 /gene="vimar" /note="visceral mesodermal armadillo-repeats; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:135835162" CDS 135..1979 /gene="vimar" /codon_start=1 /product="GTPase-GDP dissociation stimulator vimar" /protein_id="XP_065205375.1" /db_xref="GeneID:135835162" /translation="
MAEKTSIEELLSNLKIAIQKKSDVTEILLKLSKQCESNDIHVSADLLAQLVALLEKPEVTEKTAELIASLAKTESNREALTDQKLISKLCQLLQETISKKNNASLSLIKQICRALGNLCYENDDCRKFVLENSGLKVISDVVRHAVSLGDTDVGADLRACSVGFLLNFVAGNEDVYPMVLESDLKSLLCDVLDCGVTKKENESAAVHCLIIFGVFADSDPEPILNQRMCNTLVKVLRESTSGELVELSVELMNSQAEHDAVSLNLAKAGLCELLIQLLEKHKNLADDVDTRNLFKMACDLIIIILNDDESMELLYDNGKGNVFVEMVSWLSSSVKELQVTGILAIGNFARADDHCIEMVKQGISKKLLDMLSKNNTDKGDMKLQHALLSALRNLVIPDQNKTTVTKDGLLDVLYPMLSVNTFPVVFKLLGTLRIVVDKQESIAHELGCKKDLIQKVVEWSLTKDHPGVQGESIRFLAWIVKNCRKPDVLDVFIQCNAVPQMVEMIVSDHEVMQNEGLLAVTILSTVKLDLVEKVLLDSKIGEKIVRLLKERKPKKEVFINVLTLIRQLSSSNNLKQHLRKEGVSSAISDFAKTNETVSECKTEIAQVTKLLESG"
polyA_site 2454 /gene="vimar" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
cgcaaatggaaaaaggacatgaatttttaaaatcataatttccagtgaataatcctttttatagctaggttatctgggccaatcggaaatatcgcgtgagaatatttatttatggtatatttacattgagtaaaatggcagagaaaaccagtatcgaagaattattgagcaatctgaaaatagccattcaaaagaaatcggacgtgaccgagattcttctcaaattatccaaacaatgtgaatcaaacgatattcacgtttctgctgacttattggctcaattggttgccctcctcgagaaacccgaagtaaccgaaaagactgccgagttaattgcttcattagccaaaacagaaagtaaccgtgaagcgttaactgatcagaaattgatctctaaattatgccaacttcttcaagaaaccatctctaagaaaaataacgcaagtttatcgcttattaaacaaatatgccgagctctgggcaatttgtgttatgaaaatgacgattgtagaaaatttgtgctcgaaaatagcggcttgaaggtaatctccgatgttgttcgtcatgctgtatcattgggtgataccgacgttggggcagatttaagagcttgctctgttggatttttattaaactttgttgccggaaatgaagatgtttatccaatggttttagaatcggatctaaaaagtttgctatgcgatgtattggactgcggagtaacgaaaaaggagaatgaatctgcagcagtacattgtttaatcatttttggagtattcgccgattctgatcctgaaccaattttgaatcaacgtatgtgtaatacgttagtaaaagtattgagggaatccacctctggagaattagtagagctttctgtcgaattaatgaattctcaagccgaacatgacgcagtatcgttgaatctcgctaaagctggactttgcgaacttcttatccagcttttggaaaagcataaaaatttggccgacgatgtcgatacgagaaatctattcaaaatggcttgtgatctaattataatcatacttaacgatgatgaaagtatggaattattatatgataatggaaaaggtaacgtgttcgttgaaatggtatcatggctttctagcagtgtcaaagaacttcaagtaactggaattttggcgattggaaattttgctcgagccgacgatcactgcatagaaatggtgaaacaaggcattagtaaaaaattactcgatatgttatcgaaaaataataccgataaaggtgatatgaaattacaacatgctctcttaagtgctctcagaaatttggtgataccagatcaaaataagacaacggtaaccaaagacggtttattagatgtactttatccaatgctttcggtcaatactttcccagtcgtgtttaaattactgggaactttgcggatagttgtcgataagcaagaaagcatagctcacgaactcggttgcaaaaaagatcttattcaaaaagtagtcgaatggagcttaaccaaagatcatcctggggtacaaggtgaatcaattcgtttcttggcatggatagtaaaaaattgcagaaaacccgacgtattggatgtatttattcaatgtaacgctgtacctcaaatggtcgaaatgatagtcagcgatcacgaggtaatgcaaaacgaaggattgctcgcagtcacaattctaagcaccgtaaaactcgatctagttgagaaagtccttttggattcaaaaataggcgaaaaaatcgtccgtctacttaaagaacgtaaaccaaagaaagaagtcttcattaacgtattaacattaattcgtcaattatcctcttccaacaatttgaaacaacatttacgtaaagaaggtgtcagttcagcgatatcagattttgccaaaaccaacgaaaccgtatccgagtgcaagacagaaatcgcacaagtcaccaaattactagaatccggttaaagcgagatcgacgattaataattatttttcaattatcgtgcacaattttttgatttataaaaaaattttcagcaacgtgctacatgtcgctaatttcatatttttagcttgaagtgcttgttcaaaaagattgtgtgagtttgaattttttgtcgttttttctttacagttttaaagccgcgtttaggagacgtgattagggaagtttttttgtttttttgagtggatgcattcggcgaagaaaaaaagaaacgcgaaaacacgatttttttaaagtacaaatttggctcatcgctttttgttttatactacatagggttaagttatattgtttgacaacatgataggagaaattagtttctgattacgatttttttcgttcatctagtcattatttgttaccttttttttctttataattaacgttttcaatttttaatgcttaataaaactgttttcgtgcaatgttcattca
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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