2024-11-19 20:17:47, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_065276731 1773 bp mRNA linear VRT 13-MAY-2024 DEFINITION PREDICTED: Paramisgurnus dabryanus vimentin like (viml), mRNA. ACCESSION XM_065276731 VERSION XM_065276731.1 DBLINK BioProject: PRJNA1108313 KEYWORDS RefSeq. SOURCE Paramisgurnus dabryanus ORGANISM Paramisgurnus dabryanus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cobitidae; Cobitinae; Paramisgurnus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_027043850) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030506205.1-RS_2024_05 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 05/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1773 /organism="Paramisgurnus dabryanus" /mol_type="mRNA" /isolate="BB" /db_xref="taxon:90735" /chromosome="Unknown" /sex="female" /tissue_type="tail" /dev_stage="adult" /geo_loc_name="China" /collection_date="2021-01" gene 1..1773 /gene="viml" /note="vimentin like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 Proteins" /db_xref="GeneID:135767103" CDS 80..1408 /gene="viml" /codon_start=1 /product="vimentin like" /protein_id="XP_065132803.1" /db_xref="GeneID:135767103" /translation="
MSTSSYRKRFGDVTRSNEYCSREFLRPVRASRGPFGVSAAPGIYATRSSKVRSSRVTQDNLDFNLSDALNAEFKTNRMNEKTQMQSLNDRFASYIEKVRVLEQQNKMLIVELELVRGNRSSRVPDLYEEEMRELRRQVDQLTTEKTRVEMTRDNLAEDIERLREKLQDEILQREEAENNTRSFRQDVDNAALARVDLERKVESLLEEIVFLRKLHEEELAELQAQIQDQQMHVDMDLAKPDLTAALRDVRSQYENLATKNINESEEWYKSKFADLTEAANRNNEALRLAKQEANEYRRQVQALTCEVDALKGANESLERKMREIEDTFAMESSCSQDNIACLEEDLHNIKDEMARHLHEYQDLLNIKMALDIEIATYRKLLEGEESRIATPLPNFSFLNLRDTTLEPKPLTETTTTKKVVIKTIETRDGQLINESTQNHDDL"
ORIGIN
ttcttctcagtttgagacagccgtctaaagcgacactaaagtttaataattcctacaaagaggactttagacgtccaatatgtccacctcctcatacagaaagcgttttggagatgtcacccgaagcaacgagtattgcagccgcgagttcttgagaccggtgcgtgcgtcccgggggccgtttggtgtctccgcagctccggggatttacgcgaccaggagctccaaggtccgtagcagccgagtgacccaggacaacctggactttaatctctccgatgctttaaacgcggagttcaagacgaatcgcatgaacgagaagacgcagatgcaatcgctgaacgaccgcttcgccagttacatagagaaagtgcgcgttctggagcagcagaataagatgctgatagtggagctcgagctggtgcgcggcaacaggtcatcgcgcgtccccgatctatatgaagaagagatgcgcgaactacggcgacaggttgatcagctgaccacggagaaaacacgcgtggaaatgacacgagacaatctggctgaagatatagagcgactcagagagaaactgcaagatgaaattcttcaacgcgaggaagctgagaacaacacaagaagtttcagacaggatgtggataatgcggctcttgctcgcgtagatctggaaagaaaggtggaatcactactggaggagatcgtcttcctgagaaaacttcatgaagaagagctggccgagctgcaggcacagatccaggaccagcagatgcacgtggacatggatttggctaaacctgacctaacagctgctctcagagatgttagatctcaatatgagaacctggccaccaaaaacatcaatgagtcggaagagtggtacaaatcaaagtttgctgatctgacagaggcggccaaccggaataatgaggctctgcgattggccaagcaggaggccaatgaatatcgccgacaggtgcaggcgctcacctgtgaggtggatgctcttaagggtgctaatgaatctctggagcgtaagatgagggaaatagaggacacatttgcaatggagtcgtcttgttcacaggataatattgcttgtctggaagaggacctacataacataaaggatgagatggcgagacaccttcatgagtatcaggatttgctcaacatcaagatggccctggacatcgagatcgccacctacaggaaacttctggagggagaggagagcagaattgcaacacctcttccaaacttctccttcttaaatctgagagacacaacgctcgagcccaagcctttaacagaaaccacaactactaagaaagttgtcatcaagaccattgagaccagagatggtcagctgatcaatgaatccactcagaaccacgatgacctgtgaacaaacggtttatcttgcactgcaatcgatcaactgcagctccgtgtgtctcgatttaatgtgatgtgacccgtttccaagtgcctttatctgcctaaaacatatattaacccagtagataaaatgtgataacacacaagcatgacctgtagaataaactgtgaatcttttactctccgaaagtaaacccttatacctaaagagtgcacattactgtacatatctgtaactatgtactgtacccccttttaaagagtatcatcccagtgacagcttttgtaccattttctgattgtgtttaagtgcctgaacccgcttttatttttcttgcaacattagtgagccaaacattaaacataacttag
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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