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2024-11-19 20:17:47, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_065276731            1773 bp    mRNA    linear   VRT 13-MAY-2024
DEFINITION  PREDICTED: Paramisgurnus dabryanus vimentin like (viml), mRNA.
ACCESSION   XM_065276731
VERSION     XM_065276731.1
DBLINK      BioProject: PRJNA1108313
KEYWORDS    RefSeq.
SOURCE      Paramisgurnus dabryanus
  ORGANISM  Paramisgurnus dabryanus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Cobitidae; Cobitinae; Paramisgurnus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_027043850) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030506205.1-RS_2024_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Paramisgurnus dabryanus"
                     /mol_type="mRNA"
                     /isolate="BB"
                     /db_xref="taxon:90735"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="tail"
                     /dev_stage="adult"
                     /geo_loc_name="China"
                     /collection_date="2021-01"
     gene            1..1773
                     /gene="viml"
                     /note="vimentin like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 120 Proteins"
                     /db_xref="GeneID:135767103"
     CDS             80..1408
                     /gene="viml"
                     /codon_start=1
                     /product="vimentin like"
                     /protein_id="XP_065132803.1"
                     /db_xref="GeneID:135767103"
                     /translation="
MSTSSYRKRFGDVTRSNEYCSREFLRPVRASRGPFGVSAAPGIYATRSSKVRSSRVTQDNLDFNLSDALNAEFKTNRMNEKTQMQSLNDRFASYIEKVRVLEQQNKMLIVELELVRGNRSSRVPDLYEEEMRELRRQVDQLTTEKTRVEMTRDNLAEDIERLREKLQDEILQREEAENNTRSFRQDVDNAALARVDLERKVESLLEEIVFLRKLHEEELAELQAQIQDQQMHVDMDLAKPDLTAALRDVRSQYENLATKNINESEEWYKSKFADLTEAANRNNEALRLAKQEANEYRRQVQALTCEVDALKGANESLERKMREIEDTFAMESSCSQDNIACLEEDLHNIKDEMARHLHEYQDLLNIKMALDIEIATYRKLLEGEESRIATPLPNFSFLNLRDTTLEPKPLTETTTTKKVVIKTIETRDGQLINESTQNHDDL"
ORIGIN      
ttcttctcagtttgagacagccgtctaaagcgacactaaagtttaataattcctacaaagaggactttagacgtccaatatgtccacctcctcatacagaaagcgttttggagatgtcacccgaagcaacgagtattgcagccgcgagttcttgagaccggtgcgtgcgtcccgggggccgtttggtgtctccgcagctccggggatttacgcgaccaggagctccaaggtccgtagcagccgagtgacccaggacaacctggactttaatctctccgatgctttaaacgcggagttcaagacgaatcgcatgaacgagaagacgcagatgcaatcgctgaacgaccgcttcgccagttacatagagaaagtgcgcgttctggagcagcagaataagatgctgatagtggagctcgagctggtgcgcggcaacaggtcatcgcgcgtccccgatctatatgaagaagagatgcgcgaactacggcgacaggttgatcagctgaccacggagaaaacacgcgtggaaatgacacgagacaatctggctgaagatatagagcgactcagagagaaactgcaagatgaaattcttcaacgcgaggaagctgagaacaacacaagaagtttcagacaggatgtggataatgcggctcttgctcgcgtagatctggaaagaaaggtggaatcactactggaggagatcgtcttcctgagaaaacttcatgaagaagagctggccgagctgcaggcacagatccaggaccagcagatgcacgtggacatggatttggctaaacctgacctaacagctgctctcagagatgttagatctcaatatgagaacctggccaccaaaaacatcaatgagtcggaagagtggtacaaatcaaagtttgctgatctgacagaggcggccaaccggaataatgaggctctgcgattggccaagcaggaggccaatgaatatcgccgacaggtgcaggcgctcacctgtgaggtggatgctcttaagggtgctaatgaatctctggagcgtaagatgagggaaatagaggacacatttgcaatggagtcgtcttgttcacaggataatattgcttgtctggaagaggacctacataacataaaggatgagatggcgagacaccttcatgagtatcaggatttgctcaacatcaagatggccctggacatcgagatcgccacctacaggaaacttctggagggagaggagagcagaattgcaacacctcttccaaacttctccttcttaaatctgagagacacaacgctcgagcccaagcctttaacagaaaccacaactactaagaaagttgtcatcaagaccattgagaccagagatggtcagctgatcaatgaatccactcagaaccacgatgacctgtgaacaaacggtttatcttgcactgcaatcgatcaactgcagctccgtgtgtctcgatttaatgtgatgtgacccgtttccaagtgcctttatctgcctaaaacatatattaacccagtagataaaatgtgataacacacaagcatgacctgtagaataaactgtgaatcttttactctccgaaagtaaacccttatacctaaagagtgcacattactgtacatatctgtaactatgtactgtacccccttttaaagagtatcatcccagtgacagcttttgtaccattttctgattgtgtttaagtgcctgaacccgcttttatttttcttgcaacattagtgagccaaacattaaacataacttag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]