LOCUS       XM_063485978            2038 bp    mRNA    linear   VRT 22-MAY-2024
DEFINITION  PREDICTED: Pelmatolapia mariae vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_063485978
VERSION     XM_063485978.1
DBLINK      BioProject: PRJNA1078875
KEYWORDS    RefSeq.
SOURCE      Pelmatolapia mariae (spotted tilapia)
  ORGANISM  Pelmatolapia mariae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes;
            Cichlidae; African cichlids; Pseudocrenilabrinae; Pelmatolapiini;
            Pelmatolapia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086228) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036321145.2-RS_2024_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/17/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Pelmatolapia mariae"
                     /mol_type="mRNA"
                     /isolate="MD_Pm_ZW"
                     /db_xref="taxon:158779"
                     /sex="female"
                     /tissue_type="heart"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Maryland"
                     /collection_date="2023-03-23"
                     /linkage_group="LG2"
     gene            1..2038
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:134636137"
     CDS             1..1164
                     /gene="vimr2"
                     /codon_start=1
                     /product="desmin"
                     /protein_id="XP_063342048.1"
                     /db_xref="GeneID:134636137"
                     /translation="

MAMLRVSSYRKLFEDDSWRRNGGLNVWCAGQYRASVRAAAVDECDCDKLDFAAARAQNKEGLDQFVQDRTVIAALNDRLVRLIELARCFEDDNESLECQITELEEKLNNRQASSSITSTVAVADHSLDAVVERLRKQRDEILNDTQELQKELKLLKKDYEKASQQRIFVRQEQQDVAEEVDAVTAECLALREQVTIYEEQLASMETLHRTTVGDMLEPNEGITRAAVIKFGSPDIAPALDVKKYYCQLAETLQYECGAASSAVVHSGDGKEVGGTGGSTVKDLTKIKDVGEIKMLISELQKELAELEKHNEELEDEVEMKKAAYRDEIADLEATIDEMKCQKANFQEQMKEQCEDYKFLLTQKMARDMEIAAYRSLVEEEEERLCSL"

ORIGIN      

atggccatgctcagagtgtcttcttaccgcaagctgtttgaggacgacagctggagacgaaacggagggttgaacgtgtggtgtgcggggcaataccgggcctctgtcagggctgctgctgttgatgagtgcgactgtgataagttagactttgcagctgccagggctcagaacaaagaagggctggaccagtttgtccaggaccgcaccgtcattgctgccctcaatgaccgcctggtcaggctgattgagctggctcgttgttttgaggacgacaatgagtctcttgaatgtcagatcactgagttggaggagaagctgaacaatcgccaggcctcttccagcatcacctccactgtggcggtggccgaccacagcctggatgctgtggtggaaagactgcgcaagcagagggatgagattctgaatgacacacaggagctgcagaaagagctcaagctcctgaagaaagactatgagaaggcgtcgcagcagaggatcttcgtccggcaggaacaacaagatgtggctgaggaagtggatgctgtgacagcagagtgtttggctctgagagagcaagtgactatctacgaggagcagctggccagcatggagaccctgcacaggacgacagtgggggatatgctggagcccaacgaagggatcacccgggcagcagtgattaaatttggcagccctgacattgctccggctttggatgtaaaaaagtactactgccaactggctgagacactccagtatgagtgcggtgcagcctcctctgctgtggtccacagtggtgacggaaaggaagtgggaggaactggagggtcaacggtcaaagacttgacaaagataaaggacgtcggtgagataaagatgctgatttcagagctacaaaaggagcttgctgagctcgagaagcataacgaggagttggaggacgaggttgaaatgaagaaggctgcatacagggatgagattgctgatctagaggcgactatagatgaaatgaagtgtcagaaggccaatttccaagaacagatgaaggagcagtgtgaagactataagttcctgctcactcagaagatggccagagacatggagattgctgcttacaggagtctagtggaggaagaggaggagagactgtgcagcctgtgacttaagcctgagcagtcagatcggctgtcctgactgtggttgtgctccccaacacagacaaaagacaaacgcgtaaaaacagaccccaattctgcacttcgatgaagcttaacgcaacgatttggcaatttgagcagacgtaaacttagtatgacagattaatgctgtctggaggcctacagtaagctgggccattgattacaggtctctggcagatgaccctgatactccaagaacgatggagctgtctaaaactggtgggggctgtgggatgagtgtgtatccgtgcagcgtctggaagggatatttcgttaagtggggttttatctttaccagctctctgatatgactcataaatgctttgtcccctctttgttgaacaagactgacacgcaatcgcagataaacacccacacacacgcacacaccctcaactgtgcggctccgtggagtcattcccgctctgatatcacctcgtccatcactcagcctctgtctggctcttaacctgtgaccccgtcactgttaacaaacatattgacggctctctcttcagtaactaaaagcatttcgccttccctttgctttttcagccatacatttgagttggttttgacggccgagagtccagcgtgctgtgtttgcttttcaaatggttcatgaagttgtttttctgcagctctttcaaaatgagcacctggatctttccacaagaaaaactctgtgtgattaatcattgcttctttcaaaagcagtgtcccaatttgctgtcgtttcggaaataagcattcggtagtacattccctagtaatcttttccttattttctacacaatgttaaagccgtctgtgataaatcatttttggttgctgcc

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