GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-11-19 20:46:02, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_056644879             414 bp    mRNA    linear   PLN 02-JUN-2023
DEFINITION  Penicillium citrinum uncharacterized protein (N7469_005960),
            partial mRNA.
ACCESSION   XM_056644879
VERSION     XM_056644879.1
DBLINK      BioProject: PRJNA973687
            BioSample: SAMN30185321
KEYWORDS    RefSeq.
SOURCE      Penicillium citrinum
  ORGANISM  Penicillium citrinum
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae;
            Penicillium.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Petersen,C., Sorensen,T., Nielsen,M.R., Sondergaard,T.E.,
            Sorensen,J.L., Fitzpatrick,D.A., Frisvad,J.C. and Nielsen,K.L.
  TITLE     Comparative genomic study of the Penicillium genus elucidates a
            diverse pangenome and 15 lateral gene transfer events
  JOURNAL   IMA Fungus 14 (1), 3 (2023)
   PUBMED   36726175
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 414)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 414)
  AUTHORS   Petersen,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-NOV-2022) Department of Chemistry and Bioscience,
            Aalborg University, Fredrik Bajers Vej 7H, Aalborg, Nordjylland
            9220, Denmark
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_026622690).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Penicillium citrinum"
                     /mol_type="mRNA"
                     /strain="IBT 23319"
                     /culture_collection="IBT:23319"
                     /db_xref="taxon:5077"
                     /chromosome="Unknown"
     gene            <1..>414
                     /locus_tag="N7469_005960"
                     /db_xref="GeneID:81384046"
     CDS             1..414
                     /locus_tag="N7469_005960"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_056500117.1"
                     /db_xref="GeneID:81384046"
                     /translation="
MPYVAATIKEAMGWRAVVPLAFPHATTQASVTDVNLRDQYGYGPGRRIRPGMHLAERNLFLAIAKMSWVFDVGTGNGEKTRLPIEPDVDHQTGYWEGLILGARPFPCQMSVRSEARRDAIVREFQKMNSDMFSRFAF"
     misc_feature    <1..315
                     /locus_tag="N7469_005960"
                     /note="cytochrome P450 (CYP) superfamily; Region:
                     cytochrome_P450; cl41757"
                     /db_xref="CDD:477761"
ORIGIN      
atgccttatgtagctgctacaattaaagaggctatgggatggagggcagttgttccgttggcttttccgcatgctactactcaagcgtctgtgactgacgttaatctccgtgatcagtacggttatggacccggtcgtcggattcgtcctgggatgcatcttgctgaacgcaatctcttcttggctatcgcgaaaatgagttgggtatttgatgtcggtactggtaatggtgaaaagacaaggttgcctattgaaccggatgttgatcatcagacgggatattgggagggcttgatcttgggtgctcggccattcccttgtcagatgtctgtgaggtctgaggcgagaagagatgccattgtgcgggaatttcagaagatgaattctgatatgttttcgagattcgcattttga
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]