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Previous release (v1)
2026-04-25 22:30:59, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_041706848 3000 bp mRNA linear PLN 16-SEP-2025 DEFINITION Aspergillus puulaauensis argonaute/piwi family protein (APUU_60047A), partial mRNA. ACCESSION XM_041706848 VERSION XM_041706848.1 DBLINK BioProject: PRJNA728012 BioSample: SAMD00269938 Sequence Read Archive: DRR262021, DRR262022 KEYWORDS RefSeq. SOURCE Aspergillus puulaauensis ORGANISM Aspergillus puulaauensis Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus. REFERENCE 1 AUTHORS Futagami,T., Mori,K., Kadooka,C. and Tanaka,T. TITLE Aspergillus puulaauensis MK2 genome sequence JOURNAL Unpublished REFERENCE 2 (bases 1 to 3000) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-SEP-2025) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3000) AUTHORS Kazuki,M. and Futagami,T. CONSRTM Aspergillus puulaauensis MK2 genome sequencing consortium TITLE Direct Submission JOURNAL Submitted (28-JAN-2021) Contact:Taiki Futagami Kagoshima University, Agriculture; Korimoto 1-21-24, Kagoshima, Kagoshima 890-0065, Japan COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_054862). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3000 /organism="Aspergillus puulaauensis" /mol_type="mRNA" /strain="MK2" /db_xref="taxon:1220207" /chromosome="6" /geo_loc_name="Japan" /collection_date="2019" gene <1..>3000 /locus_tag="APUU_60047A" /db_xref="GeneID:64977004" CDS 1..3000 /locus_tag="APUU_60047A" /note="COG:J; EggNog:ENOG410PISF; InterPro:IPR012337,IPR032474,IPR036397,IPR014811, IPR036085,IPR003100,IPR003165; PFAM:PF02171,PF16486,PF08699; antiSMASH:Cluster_6.2; go_function: GO:0003676 - nucleic acid binding [Evidence IEA]; go_function: GO:0005515 - protein binding [Evidence IEA]" /codon_start=1 /product="argonaute/piwi family protein" /protein_id="XP_041559193.1" /db_xref="GeneID:64977004" /translation="
MSFKGFRGPKSQASGGPGGHGQGGRGQGGRGQGGRGQGGPGRGQGDRAGPSIFSPGYDAAPDTGVADTENALIKSFTGPSSTPIDPMMPRRPGFGTRGQKVVLWANSFPLAFKEDVRLYRYNVDITPGTGAANVPTGKKKRRVVQLLLDNHFSGHRLGIATDFKSTLISATDLELGEEVYQVPYRGDFEDEHAAGAPTYNVRVQSTGMVNLPALIDYLTSTNAGAMLGSKDEVIQALNIVLGHTPRAAFDMASIGSSKHFRLTGGTGEKLDIGSGLCALRGFFFSVRAATARAIVNVQVKSAAFYNEGPLDMVMRAYLQDNGHSRVKLGNFLKRLSVNVTHIKRTNRQGQVVPRVKQIFGLATQQDGQGDPTPPKVSSFGAGPKDVLFYLGDPSSTEKSKKGKKAEKGGPYPPVSKNGYISVYDFFRQRYQITIKDPSLPVINTGTRQRPSYLPAQTCFVLPGQPSKAKLSPMQTQNMIKFAVRKPVMNAESIVTSGLQTLGVGGEASNLGTLGMNLTPRLLAVPGRVLNSPDVKYGGNGMVRPTSGSWNMSSMKFSAASQLTFWTFLWLSYPGGRDPWKDNAALKPTVDAFTDTLRQTGINVNDCTLGQHIVVNDVDQDIDTAVKKFTASPKPPLFILVILPAADTAIYNRVKYVCDVKEGLPNICVVANKFAKPRNDQYFSNIALKLNLKLGGRNQLLDAARLGIVSEGKTMVVGLDVTHPSPGSSPDAPSVAAIVASVDKSLGQWPADLRIQPARQEMVASLDLMLRSRLDLWKKHNGSYPANILVYRDGVSEGQYNLVLENELPALRKACRELYSPDSTKKGIPRLTIVVVGKRHHHRFYPSRAEDADKSTNPRNGTVVDRIVTEARHWDFFLQAHAAIQGTARPAHYYIIYDEIFRDTNVRPPFKNAADALEDLTHNMCYLFGRATKAVSICPPAYYADLVCERARCYLSRLFDPSPVVSPEPSVMGGAGGVSMTPDSSLVAIHDRIRHTMFYI"
misc_feature 424..723
/locus_tag="APUU_60047A"
/note="N-terminal domain of argonaute; Region: ArgoN;
pfam16486"
/db_xref="CDD:465134"
misc_feature 763..915
/locus_tag="APUU_60047A"
/note="Argonaute linker 1 domain; Region: ArgoL1;
pfam08699"
/db_xref="CDD:462567"
misc_feature 919..1383
/locus_tag="APUU_60047A"
/note="PAZ domain, argonaute_like subfamily. Argonaute is
part of the RNA-induced silencing complex (RISC), and is
an endonuclease that plays a key role in the RNA
interference pathway. The PAZ domain has been named after
the proteins Piwi,Argonaut, and Zwille; Region:
PAZ_argonaute_like; cd02846"
/db_xref="CDD:239212"
misc_feature order(1063..1065,1162..1164,1264..1266,1276..1278,
1330..1332,1351..1353,1357..1359)
/locus_tag="APUU_60047A"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239212"
misc_feature <1237..1437
/locus_tag="APUU_60047A"
/note="PAZ domain; Region: PAZ; pfam02170"
/db_xref="CDD:460472"
misc_feature 1525..2862
/locus_tag="APUU_60047A"
/note="PIWI domain, Argonaute-like subfamily. Argonaute is
the central component of the RNA-induced silencing complex
(RISC) and related complexes. The PIWI domain is the
C-terminal portion of Argonaute and consists of two
subdomains, one of which provides the...; Region:
Piwi_ago-like; cd04657"
/db_xref="CDD:240015"
misc_feature order(1948..1950,1960..1962,1996..2007,2014..2016,
2041..2043,2050..2052,2062..2064,2074..2076)
/locus_tag="APUU_60047A"
/note="5' RNA guide strand anchoring site [active]"
/db_xref="CDD:240015"
misc_feature order(2155..2157,2161..2163,2374..2376,2830..2832)
/locus_tag="APUU_60047A"
/note="active site"
/db_xref="CDD:240015"
ORIGIN
atgtcgttcaaggggtttcgcggtccaaagtctcaagctagcggtggcccgggaggccatggacagggaggccgtggacagggaggtcgtggacagggaggtcgtggacagggaggtccaggtcgtggtcaaggcgatcgagctggcccgtcaatcttcagccccggctacgatgctgctccggatacaggggttgctgatactgagaacgctctcatcaagtccttcacggggcctagcagtactccgatagaccccatgatgccgcggcgcccagggttcggtacccgaggacagaaggtggtgctgtgggctaattcgttcccgttggcattcaaggaagatgttcgcctttaccggtacaatgtcgatatcacaccaggcactggtgcagcaaatgttccgacagggaagaagaagaggcgggtggtccagttactcctcgacaaccatttctctggtcacagacttggtattgcgacggattttaaatctactctcataagcgcaacggatcttgagctgggcgaggaagtgtatcaggtcccgtatcgcggcgatttcgaggacgagcatgcggctggtgcaccaacttacaatgtccgcgtgcaatcaacgggcatggtgaatttgcctgcattgatcgactatctgacatccaccaatgctggcgcaatgctaggttcgaaagatgaagtcatacaagccctgaatatcgttcttgggcacactcccagggcagcttttgatatggcatcaatcggctctagcaagcactttcgtctcacgggcggtaccggtgagaagctggacattggcagtggattatgtgctcttcgcgggttcttcttcagcgtccgtgcagctactgcccgggccatagtcaacgttcaagttaaaagcgcggcgttttacaatgaagggcctctggacatggtgatgcgggcgtatctacaagacaacggacatagtagggttaaacttggcaattttctcaaacgactatcggtcaacgtgacacatatcaagagaacaaatagacaaggccaggtggtcccacgagttaaacagatttttggcctggctactcagcaagacggccagggtgacccaactcctccaaaggtcagttcgtttggcgcagggccaaaggacgtcctcttttaccttggcgaccctagtagtaccgaaaagtccaagaaggggaagaaggctgaaaaaggtggaccttatcctcctgtgtccaaaaatggatatatcagtgtatacgactttttccggcaaaggtatcagatcaccatcaaagacccaagtcttccagttatcaacacgggaactcgccagcgaccatcctacctccccgcccagacgtgctttgttcttcctggtcagccttcgaaggctaaattgagtccgatgcagacccagaatatgatcaagtttgcagtccgcaagcccgtaatgaacgcggaatcgattgtcacgtctgggcttcaaacactcggtgtagggggcgaggcttcgaatctgggcaccttgggaatgaatttgactccgagattacttgcggtgcctggacgtgtgttgaatagccccgacgtcaaatatggagggaatggaatggtaaggccaacgtctggcagctggaatatgtcgtccatgaagttctccgccgcctcccaactaacgttttggactttcttgtggttgtcgtatcctggcggcagggacccatggaaagacaatgctgccctgaagcctacagtcgatgcctttaccgatactcttcgccagaccggcattaacgtcaatgactgtactctgggccagcacatcgttgtgaatgacgtggaccaggatatcgacacagcggtcaaaaagtttaccgctagcccaaagcctcccctttttattcttgtgattcttccagcggccgataccgccatttacaaccgagtgaaatatgtctgcgatgtcaaggagggcctgccaaacatctgtgtcgttgctaataaatttgcaaaacccagaaatgaccaatacttctccaatatcgccctcaagttgaacctcaaacttggcggccggaaccagctcctggatgctgccagacttggaattgtatccgaaggcaagactatggtagtcggcctggacgtgacgcatccgtctccaggctcgtctcctgacgcacccagtgtggcagccattgttgcttctgtggataagagtcttggacagtggcctgcggacttgagaattcagccagcgcggcaggaaatggtagcgagtttggacctcatgctgagatcacggctggatctctggaagaaacataatgggtcgtatccagccaatatcctggtttacagagacggcgtatcggaaggccaatacaatctggtgcttgagaacgagctgcccgcgctgcgcaaggcctgcagagagctgtactcgccggactctacaaagaagggcattccccggttgacaattgtcgtcgtcgggaagcgtcaccatcaccgcttctacccctcgagggcagaggacgccgacaagtcaacaaacccgcggaacggaacagtggttgaccgcatcgtcaccgaagcacgtcactgggacttcttcctccaagcacacgcggcaatccaaggcaccgcccgtccggcacactactacattatctatgatgagattttccgcgacacgaacgtccggccgccgttcaaaaacgcagccgacgccctggaggacctcacacataatatgtgctatctgtttgggcgtgctaccaaggctgtcagtatctgtccgccagcctactacgctgacctcgtttgcgagagagcgcggtgctatctgagcaggcttttcgacccatcaccggtagttagtccggagcccagtgtaatgggcggtgcaggtggagtatcgatgaccccggattccagtctcgtggccatccacgacagaattcgccacacgatgttctatatctaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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