LOCUS       XM_020761847            2363 bp    mRNA    linear   INV 10-APR-2017
DEFINITION  PREDICTED: Orbicella faveolata protein argonaute-2-like
            (LOC110055455), transcript variant X1, mRNA.
ACCESSION   XM_020761847
VERSION     XM_020761847.1
DBLINK      BioProject: PRJNA381078
KEYWORDS    RefSeq.
SOURCE      Orbicella faveolata
  ORGANISM  Orbicella faveolata
            Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
            Faviina; Merulinidae; Orbicella.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018149549.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Orbicella faveolata Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Orbicella faveolata"
                     /mol_type="mRNA"
                     /isolate="FL"
                     /db_xref="taxon:48498"
                     /chromosome="Unknown"
                     /sex="hermaphrodite"
                     /tissue_type="whole organism"
                     /dev_stage="adult"
                     /geo_loc_name="Panama"
                     /collection_date="Aug-2013"
                     /collected_by="Nancy Knowlton"
                     /identified_by="Nancy Knowlton"
     gene            1..2363
                     /gene="LOC110055455"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 58 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 6 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:110055455"
     CDS             25..1998
                     /gene="LOC110055455"
                     /codon_start=1
                     /product="protein argonaute-2-like isoform X1"
                     /protein_id="XP_020617506.1"
                     /db_xref="GeneID:110055455"
                     /translation="

MSAIKHRILNGHPILGYFISVSTKGFYKKQNVIDFLCETLGRDVTPQSLQNRHFQLDKHRLEKAIRGIRIQATHAAAIKRKYKVWGVSSDPAEKLQFVVEDGVTGRKSKTTEAEYFKNKYKLHLRYPHLPCLLAGQKRDRYLPLEVCTIIPCQKRHLSEEQTANMIRSTARPAPERQQDIQYWAQNMIQTNSKYLREEFQTSVSPEMVKVVGRVLPAPKIKLGPQDQALVPRDGSWDMRSKLLHEGALISTWALACFASRCSEDQLRNFCNQMASVSTREGMWMTEQPTALEYPGGFCDVESLFSQWAVDYPQLQLIIAVLPDKAKELYSEIKRVGDIVLGIATQCVKIQHAQQAKPQVCANISLKINSKLGGINHVIDPSEKSPVFRDPVIIFGADVTHPTPTENGIPSIAAVAASMDVNATKYCARVRAQRHEKSRGPQEIINDLAVMVKELLIEFYKANWRRKPSTIIFYRDGVSESQFDQVLIHEVRAVQVACMMLEKEYRPRITFVVAQKRHHTRLFCEDRRDASGKAQNVPPGTTVDGGITHPYEFDFYLCSHYGIQGTSRPTHYHVLYDDNAFTADGLQQLTYQLCHVYARCTRSVSIPAPAYYAHLVAFRARRHMTNGENGRRGDTVDLEKSARAIQVHDRMKEAMYFT"

     misc_feature    112..474
                     /gene="LOC110055455"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(268..270,313..315,358..360,370..372,424..426,
                     442..444,448..450)
                     /gene="LOC110055455"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    601..1893
                     /gene="LOC110055455"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1009..1011,1021..1023,1057..1068,1075..1077,
                     1099..1101,1108..1110,1120..1122,1132..1134)
                     /gene="LOC110055455"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1213..1215,1219..1221,1447..1449,1861..1863)
                     /gene="LOC110055455"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gcccagtagacataaagtcagcttatgtctgcaattaaacatcgaatattgaatggccatcctattcttggctattttatttcagtctctacaaaaggtttctacaagaaacaaaacgtcatagacttcctatgtgaaactcttggacgagatgtaacaccccaaagtctccaaaaccgtcactttcagcttgataaacatagacttgagaaggccatacgtggaattcgtatacaagctactcatgcagccgctattaagagaaagtacaaagtatggggagtatcaagtgaccccgcagaaaagctacagtttgtagtcgaggatggagtaactggtcgcaaaagcaaaacaaccgaggcagagtattttaagaataaatacaagttgcatttgagatatcctcacctaccctgtctactagctggccaaaaaagggaccgttacctgccactagaagtctgtaccataattccttgtcaaaaaaggcatttatcagaggaacagacggcaaacatgatcagaagtactgctcgccctgcacctgaaaggcaacaggacattcagtattgggcccaaaacatgatacaaaccaatagtaagtacttaagggaggagttccagacttctgttagccctgaaatggtcaaggtcgttggccgcgtactgccagcaccaaaaatcaagcttggaccacaagatcaagctttggttccacgagatggttcttgggacatgcgtagcaagttgcttcatgagggagcgctcattagcacttgggccttagcttgttttgccagtaggtgtagcgaagatcagctgaggaacttttgtaaccaaatggcctctgtgtcgactcgagagggaatgtggatgacagaacaaccaactgctttggaatatcctgggggcttctgtgatgtggaaagtctattctctcagtgggcggtagattatccacaactacagcttatcatagctgttctgccagataaagccaaggaactttattcagagatcaaacgagttggcgacattgtcctaggaattgccacccaatgtgttaaaattcagcacgcacaacaagcgaaacctcaagtctgtgccaatatctctttgaagataaactccaagttaggtggaattaatcatgtgattgatccgtcagagaagtcccccgtgtttagagatcctgttatcatctttggtgcggatgtaacacaccccactcctactgaaaatgggattccatctatcgctgctgttgcggccagtatggatgtaaatgcaaccaaatattgcgcacgggttcgagcgcagagacacgagaagtctagaggtcctcaggaaattattaacgatctggctgtcatggttaaagagcttcttatcgagttctacaaagcgaattggagacgtaagccgtccacaatcattttttaccgtgatggagtcagtgaaagtcagtttgaccaagtactgattcatgaagtgcgagctgttcaggtggcctgtatgatgctggaaaaggaatatcgtccaagaatcacttttgttgtggctcagaagcgccaccacacaagactgttctgtgaagacagacgagatgcttcagggaaagctcagaatgtaccaccaggcaccactgtggatggtggtataacacacccatatgagtttgatttctacctgtgcagccactatggaatccagggaacaagccgacccactcactatcacgttttgtacgacgataacgcctttacagcagacggtcttcaacagctcacttatcagctgtgccacgtatatgcacgttgcactcgcagtgtctccataccagcccccgcctattatgcacatttggtagcatttcgagccagacgccacatgaccaacggcgaaaatggaaggaggggggacactgtagatttggagaaatctgcaagagccattcaagttcatgacagaatgaaagaagcgatgtattttacgtaaacaattaacatgataatactgtatatatgtgctcgaaatgaaaaaaaagaaaagaaaaagatgaaaaatacatcgctgacaagtagcaataccgcgtaaatgtctccatgaataacaactgtttatgagaatatgtaatcctgatattccattagttttaaatattttttcctgacttttaggttgcaagtgatttgaaaacggtgatgcattctgctacatgtagttagcattccggggggaactcccatataaaaaggacaggggtggtcatcgtaccttttagggcttaagagtgaggttttggtacctcttagggtgttcggcctgaagtgatccacagagggagcttttacggtgccttt

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