LOCUS       XM_020645438            2122 bp    mRNA    linear   VRT 24-JUN-2024
DEFINITION  PREDICTED: Labrus bergylta vimentin-related 2 (vimr2), mRNA.
ACCESSION   XM_020645438
VERSION     XM_020645438.3
DBLINK      BioProject: PRJNA1126594
KEYWORDS    RefSeq.
SOURCE      Labrus bergylta (ballan wrasse)
  ORGANISM  Labrus bergylta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089203) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 24, 2024 this sequence version replaced XM_020645438.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963930695.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Labrus bergylta"
                     /mol_type="mRNA"
                     /db_xref="taxon:56723"
                     /chromosome="9"
     gene            1..2122
                     /gene="vimr2"
                     /note="vimentin-related 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:109992713"
     CDS             50..1213
                     /gene="vimr2"
                     /codon_start=1
                     /product="alpha-internexin"
                     /protein_id="XP_020501094.2"
                     /db_xref="GeneID:109992713"
                     /translation="

MAMLRVSSYRRLFEEENWSRNGRLGCAGQYRASVRTAAVDKCDCDKLDFVAAKALNKDGLNRFIQDRIIIAALNDRLVRLIELAHCFEEENESLECQIVDLEEKLNRRPASSSITSTRFEPDYSLDAVVERLRRERDEILCETEELQKELEHLMKEYEKAAQQRILLQQGRQGVAEKVDTVTAECLALREQVAIYEEQLANMEAQHSTAVQSLLHPAEQTTGAVAAIKFGSPDIAPALDVKAYYCQLAESLQFESSASSAVVPSGEGKQMEVGGAAGSTVKNLPKITDISEMKALISALQKELAGLEKCNEELEDEVEMKRAAYMDQIAELESTIDEMQNQEADFQVQMREQCEDYKELLSEKMARDMEITAYRSLVEEEEERLCNL"

     polyA_site      2122
                     /gene="vimr2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

acctgctgccaccatttgcctgttgtgcagtgtgaacccctccgaagccatggccatgctcagagtgtcttcttaccgcagactgtttgaggaggagaactggagtcggaatggaagattgggttgtgcagggcagtaccgggcctccgtcaggactgcggctgttgacaagtgtgattgtgacaaactagattttgttgctgcaaaggcgctgaacaaggacggcctgaaccggttcatccaggatcgcatcatcatcgctgccctcaatgaccgcctggtcaggcttattgagctggctcattgttttgaggaggagaatgagtctcttgaatgtcagattgttgatctagaggagaagctaaacagacgaccggcctcctccagcatcacttctacgaggtttgagcctgactacagcctggatgcggtggtggagagattgcgcagagagagggatgagattctgtgtgagacggaggagctacagaaagagcttgaacatttgatgaaagagtacgagaaggcagcacagcagagaatcctccttcagcagggacgacaaggtgttgctgagaaagtggacactgtgacagcggagtgtttggcactgagggagcaagtggctatctatgaggagcagctggctaacatggaggcccagcatagcacggcagtgcagagtctgctgcatccagctgaacagacgacaggagccgtggcggctattaaatttggcagccctgacatcgctccggccttggatgtaaaggcgtactactgccagctggctgagagcctccagtttgagagttcagcctcttctgctgtcgtcccgagcggtgaaggaaaacaaatggaagtgggaggtgctgcagggtcaacagtcaaaaacctgccaaagataacggacatcagtgagatgaaggcgctgatatctgcgctgcaaaaggagctcgctgggcttgagaagtgtaacgaggagctggaggacgaggttgagatgaagagagctgcgtacatggaccagatcgctgagctggagagtactattgatgaaatgcaaaaccaggaggccgacttccaagtgcaaatgagggagcagtgtgaagactacaaggagctgctgagtgagaagatggccagagacatggaaatcaccgcctacaggagtctggtggaggaagaggaggagaggctttgtaacctgtgacttgatgcttggagagttctgctggattctctgcagcacacagattacaaaaaaataccccaaaaaataaagagaaatgctcactcagccagcactaggctgaagcttgtggaaccaatgcagcaatttaagcagatgtaaacttatcatgacagattaatgacgtctggaggcctaatctgggctgttgataacaggtcacaggcagatgaccctgagaatacaagaaagatgaagctgtccaaaactggtgggaggtcgaagggggactgcgcaatgagtgtgtatccattaagtgtctgtcagggatgtttccttaagtgggttttatctcaacgtagctctctgatatgattcataaatgttttgtccgctctttgttgaacaaatcccacacagacacacagaaacacagacacacacagtaaagctgagcgaccacctcgtccatcactcaaactttgtctgattaccagctcttaacctttgactccttcactgttaacaaacatctcgtcagctctgaactcaaagcatctcaccttcctcttgcttttacagttgtgcatacatgttggttttttacatatagttaaagtcaaaccgttcagagcactgtttgcttttcaaatggctcatgaagttgttttaccgctgctctgacaaaatgagcacctggatctttctctaagaaaagtcggtgtgatccatcatttcttctctgcagtgtcccaatatacaagggtttggtaacacattcctctataattttttccttatattttacatgacttaaaagtgtctgtaataaatcattttttgctttttggtccccgcttctgcacaatcatcagagtgtgccttaactttaaattcaataaaagtagttgcttgagcgatcacctcata

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