LOCUS       XM_019880114            4005 bp    mRNA    linear   VRT 10-JAN-2017
DEFINITION  PREDICTED: Hippocampus comes testis and ovary specific PAZ domain
            containing 1 (topaz1), transcript variant X1, mRNA.
ACCESSION   XM_019880114
VERSION     XM_019880114.1
DBLINK      BioProject: PRJNA359802
KEYWORDS    RefSeq.
SOURCE      Hippocampus comes (tiger tail seahorse)
  ORGANISM  Hippocampus comes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei;
            Syngnathidae; Hippocampus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017805584.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Hippocampus comes Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4005
                     /organism="Hippocampus comes"
                     /mol_type="mRNA"
                     /isolate="QL1"
                     /db_xref="taxon:109280"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="mature"
     gene            1..4005
                     /gene="topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:109521959"
     CDS             135..3809
                     /gene="topaz1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X1"
                     /protein_id="XP_019735673.1"
                     /db_xref="GeneID:109521959"
                     /translation="

MFPSTRKVTLNRTKLKDTTCPNPMPPRRLKKPSEVGRDRTFHIMEPSSGPQQAEETARCSPGFCHNRGRSSDQNINPIPTSPAGSEASLKKIVRSSACELCGDCKIISPRRRRTLVRQGPQKLAPCSEQHKSIQTRKKVLDLTVNLCDVVRMSGARCYDCGFVLPHDLETETVYCFKEDITAAGLQLRSCCSGHQKDGSDEHQRVESDPGTSCDTIGTEISGGKTYHNNTEFLTHRATPRVTPDVETKNPNCLSNEQTPCGTSNSPSQPRPEFTVGMCNEVGDGPEMCAMPEETPGLMDDDPGSLTCQRVRLYVWKRRSSCARTYIVWHNKQLVVSGFMKPDTHTSDFAQTEEIPPVSHTPREPSPSFDTSGDAGDRVDSGRVEETDEKATGVRGNAQQLESEQTMSTDRPPDAAECGPPLGSSDHDDDESFNGECRSPSPSDPGSPGSPPSELADGERRPTQSGTGGGAHLGVLDEFTAYQRDILLVDVDRDDSELFDGVPQESLLKLGPNRAHENPKTLTTYGASQTFKQSWTPVNINRPCDSSDNEENPSRPWRPKKSDASPKSQSNLLGEENGTEPTVLEQGTSYAGRDHISGDIQERNAQVEAESEWRHPVPPLGPVWKGPSMPNTANKCDPRCPKINFYCSVFFGGSLSCNDNICRFLHVPMKGDEKFCVNTVSRFTKNPVCLQKAGDLFASYYQHNPPGMFFSVPVFLSLLWTLLKADLVPDVLSVLSVALAHKIVPTHEFLLALFTCVREKGFASGVPRLMQLTYKMASENLMLSLDCFDGIENIPEYQQIIDPNVPDTRRPSVSDGVPISCSLILAHVIVEMELCTEQENWRCLGKAFRSICTPCQHPSQVERISGNVAVALLSKTRDKLSVPFVAFAETICPTEDPNSPLMGFIGRIGVSLMQRYHKTQQWAKGRRLMEALTRFKINYSMQRGLFVNEDGSSRCNLITLAAELFLLGGSVEGALRTLRESKWFVSSNVWPCKQPDLERRSRVLAHLAEKASHRDALEVLRNLPGIQKPNDQVDISKYTPLFNTHLQVCVDRLVLPVASDLAYLMLSRKVPVDGAVLRALLHKLGKQNHWQRARELFRHSLTAGHYPAVSAPAGFMSLIVPSQLGEVELSLTFEMLITVNASFILPLPEMTTTTLNIILKRSQESEREYLSAGSRLLLAALIPQPNLEVHYTTVNSSREQVFTLSVASALRWLRRNHTWANKMWS"

     misc_feature    2625..3143
                     /gene="topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

gtctgtacttttgcaacctctggtgtcatgtcgaaggaaggtctcaccattttaggcaccaaaggacgtttcgtctgacgagcaattacgcatgcgctgtgtcgtcgccgactgtcgacgtcggcctttccataatgttcccgtccacgcgtaaggtaacacttaatcgaaccaaattgaaagataccacctgccccaacccgatgccgccacgaagactgaaaaagccgtcagaggttgggcgtgacaggacgttccacataatggagccgagtagcgggccgcaacaagcggaggaaacggccaggtgtagcccaggcttttgccataacagggggaggagctcagatcaaaatataaatccgatccctacctcccctgccggttcagaagcctccttgaaaaaaattgttcgatcctctgcctgtgagctatgtggtgactgtaaaatcatttctccgaggaggaggaggacactggtcaggcaggggccccaaaaattggccccttgctcagaacagcacaaatccattcaaacaagaaagaaagtcctggacctcaccgtcaacctttgtgacgtcgtccgaatgtctggcgcaaggtgctacgattgtggctttgtgctaccacatgatctcgagaccgagactgtttattgctttaaagaggacataacagccgctggattgcagctcaggtcctgttgttcaggccaccagaaagatggaagtgacgagcaccagcgcgttgagtccgaccccgggacatcatgtgacaccatcggaacagagatatccgggggcaaaacatatcacaacaacactgagtttctcacgcatcgtgcaacaccgagagttactccagatgtggaaaccaagaatcccaactgcctctcaaatgagcaaacaccatgcgggacttcaaacagtcccagtcagccgcgtccagagtttacggtcgggatgtgcaatgaagtgggagacggacccgaaatgtgcgccatgccagaggagacgccgggattaatggatgatgacccagggtccttaacctgccagagagtgaggctctatgtttggaaaagaaggagttcctgcgcacgcacttatatcgtctggcacaacaagcaactggttgtgagtggattcatgaagccggatacccacacgagtgactttgcacaaacagaagaaatcccgcctgtttctcatactccaagagagccgtcaccctctttcgacacaagcggtgacgccggcgatcgcgttgacagcgggcgtgtggaagaaacggatgaaaaggccactggggtacgaggtaacgcgcaacaactcgaatcggaacagaccatgagcacggaccgtccgccggacgctgccgaatgcggccctcccctcggcagttctgatcatgacgatgatgaatccttcaacggcgagtgccggtcgccttcccctagcgacccgggatcaccaggatcgccgccgtctgagctcgcagacggtgaacgccgtccaacccaatccgggacaggcggtggcgctcatttgggcgttttggacgagttcacggcatatcaacgtgacatcctgcttgtggatgtggaccgcgacgactcggagctctttgacggcgtaccccaggagagtctgctgaaactgggtcccaacagagctcacgaaaacccaaagactttgaccacatatggagcgtcgcagactttcaaacaaagttggaccccagttaatataaatcgtccgtgcgacagttcagacaacgaggagaacccgagcaggccctggcggcctaagaagagcgacgcttctcccaaaagccaaagcaacctattaggagaagaaaacggcaccgaaccaacggtgcttgaacagggcacatcttatgccggcagagatcatataagcggagacatccaggaaaggaacgcgcaagtggaggccgagagcgaatggcgtcaccccgtccctccacttgggccggtgtggaagggtccgtccatgccaaacactgcaaacaagtgtgatccgaggtgtcccaaaattaatttctactgcagcgtgttcttcggtggatcgctgtcctgtaacgacaacatatgccgctttctgcacgtgccgatgaaaggcgacgagaagttctgtgtcaacacggtgtcacgcttcaccaaaaatccagtgtgcctccagaaagcaggggatttgttcgcaagctactaccagcacaacccccccggaatgtttttctccgtgcccgtgtttctctccctcctctggactctcctgaaagcagacctcgtacctgatgttctgtcggtgctcagtgtggccttggctcataaaatcgtgcctactcatgagttcctgctcgctcttttcacctgtgtgagagaaaaaggcttcgcaagcggtgtgcctcgcctcatgcagctaacatacaagatggccagtgagaatttaatgctgagcttggattgcttcgatggtattgaaaacattcctgaataccagcagatcattgatccaaacgtgcctgatacacgaagaccatctgtgtccgacggcgtgcccatttcatgctccttgatcttggcccatgtcattgtggagatggagctttgtaccgagcaagagaactggcgctgcctggggaaagcctttcgctccatttgcacaccctgccaacatcccagccaagtggagcgcatcagcgggaacgttgctgtcgctcttctgtccaagaccagagacaagttgtctgtgccgtttgtggcgtttgctgagacaatttgtcccactgaagatccaaactccccgttgatgggtttcattggcagaattggagtctctctcatgcaaagataccataaaactcaacagtgggccaagggtcggaggctgatggaggcgctgacccggtttaagatcaactactcgatgcagagaggtttgtttgtgaatgaggacggcagctcacgctgcaacctgatcaccttggcagcagagctcttcctcctcggcggcagcgtggaaggagctctccgaactctccgagaaagcaaatggtttgtgagttcaaacgtttggccgtgtaagcagcctgacctggagagaagaagccgcgtactcgcccatctggctgagaaagcctcacacagagacgcattagaggtcctgcggaatctcccgggaatacaaaagcccaacgaccaggttgacatctctaagtacacccccttgtttaatacacacctgcaagtgtgtgtggacagacttgtgctccccgtggcctcagacttggcgtacttaatgctttccagaaaggtaccagtagatggcgctgtgctgcgtgcgcttttgcacaagctcgggaaacaaaaccattggcaacgtgcgcgcgaactcttcaggcactctctaaccgctggccattacccagctgtatcggcccccgctgggttcatgtccctgatcgttcccagtcaactgggggaggtggaactatctctcacatttgagatgttaatcactgtcaatgcttcattcattctcccccttcctgagatgacaaccaccaccctcaacatcatcctgaaaaggagtcaagagagcgagagagagtacctctcagctggtagccgcctgctcttagcggccctcattcctcagcccaatctggaggtccactacactactgtaaactcctcacgggaacaagtcttcacacttagcgttgcctcggccctacgatggctgcgtagaaatcatacgtgggcaaacaagatgtggagttagttagtttatagagtaagtttaaaaaaaaaaaaagaatttcataaagtaagtgtaagcgttatggttttgacaatagtgtgactgctttatagtatgagctatgtaagtactgttactgtactttgtatagttttgtttataatacttttagaaaatgttttcaatgttcgtgtataaagttctgttccacaatggt

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