LOCUS       XM_019533662            9230 bp    mRNA    linear   VRT 20-DEC-2016
DEFINITION  PREDICTED: Crocodylus porosus testis and ovary specific PAZ domain
            containing 1 (TOPAZ1), mRNA.
ACCESSION   XM_019533662
VERSION     XM_019533662.1
DBLINK      BioProject: PRJNA357059
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Crocodylus porosus (Australian saltwater crocodile)
  ORGANISM  Crocodylus porosus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Crocodylia; Longirostres; Crocodylidae;
            Crocodylus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_017728886.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Crocodylus porosus Annotation
                                           Release 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..9230
                     /organism="Crocodylus porosus"
                     /mol_type="mRNA"
                     /isolate="Cpor-Errol"
                     /db_xref="taxon:8502"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="blood"
     gene            1..9230
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 96% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:109309036"
     CDS             1..6297
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1"
                     /protein_id="XP_019389207.1"
                     /db_xref="GeneID:109309036"
                     /translation="

MPQLRSGRGLAVSPPGGGSHRLRSRRGRRGRGAGDAAGGRGEVAELPAGKGWARAPGRRRQLLPSVEALAGGSGAVQSTEAESGDSSRGLAEQVAGVEEQAGSLPVSGGAERRVGGRREKDGDALTLGQRVLAFEGKHRGPNERSGGAVGDVGKSRQRSFSEPGVQVPKEPESPVQEDRHASVELGSGGAAESPRKRGRCSLSEPGPQEKERCPGERGESFLAEVGLSGPLDKEGKEGNLGKQDRLIVEPKLQKPKKRGRYSLGMWQPLGAQELASSRKREKHSLELESQSLGLQGAVSNLGEVGEHFCSVLKLELQSMGLQESTESPKRRSKHSMVVPTMIVPYEGAGNTIKRGKLSATNLQPINLSLQGGERTVGKRARSSSVKLWRSGSQNEAEILEKASKNFSEGGRLSENRKKSSSTEKWVTEYVEERLMPSRVSLTGTTQGNRQGKLDKQQASGQEVISAPTNDLFINRLEDDGERQTDGNEETVVSSELKLKIRKPTKKKGMDLNEVPDAQVEKQLETAQNTAKESSVRTSSLVAYSESFQLPQSDGTQSKRTASRCLASGSAVDCNRTKNKITKIKCLQRLTVQTAENKLTSKSIECKDECREALKQHNSLLSIAEKNPVVALHDCRYLNTFVKSSVDGSNNSYKIDSGFLHALHGKTVCPGSVTGQSGMNAAQPERWCARGIISFDEEGTCQNREKCFSCSLNRNKCFRESKWNIGEKPRKKMKLFERTEKLATQNVLPGRVNSECELHTENKTLAMVSLAVLGELNSNKICLSSSCDLISNAHVENNTKKALNSLPKPVSRKMCVKPGAIEDSFEKNLQLPEAAQREKSFFNAESMAPQDHSNLKSPGVIRLVSDISNCCSDSGSCQKKLLNEKLFKKPEKLQAFSCQRAIPMTGKNVWPRESCARTSVWFPKKDKSIIEKKNSLTSFQGCSHQNTKTLRGMDVTDNSKQLDLHMSMTEINKQNACKITDSNTECLASVAILESSLSDINGALRVTKDENLELSLDKGRSSMTFNSGSVQEGKITLNLSGKQKQDKNKGALKAKNVAMTSQDSMCADNVGKMICNPEMPVTKQTQEFPGLVRMLSTGNLSNFKIPLLRNKTESRKVDYIRSFERETYSPLELLDNSAATPVRQNRSKENSPLVYSDFFLATAKEKAYQITNKDLGNDDSERLSDEKKRLAEHVSACPWDFPERELMSLTSEDTFGTEFREKSNEADHSSKIVKHSTSSEVFVNDEKKLKEKPTQSSSTNFPDVLKAYEDDILVIDVIQDDPDLFGTTNEGEFELDCETEKHGNTLTPVEKQNFTPKFHNLQENKDSNYYHEYARDSPIQESGTLQPIADSCDSLVTANEINKHDSSRGSSPLGGVTEESSEDGQLTESDEHTKGSNVDEKYRFSGKSSVKEEKDSIYEKSSDSECAEFVSPDLSLGLQLPCLEVKAHHGSTVHKPGMNDFRYSGKCPLLPHPNSNCYEPWKMDKSVPVSHSIQKILEIELPRKYCRFYFNTLRGCERAECWFWHVPEQGDEKICMAVLRTYINMNETSLLQRAVQIFMNYYREVIPGVHFDLQVLNDLLIALLKHCLLKEVFPLLNIGIMIKRLPPIDVILKVFEHVASMNNREAVPKLIDAFCKLFDAGMGFESEHFNYIVKFLHQLQVSSQEINTVLNIKSRFQAKQFKKNWLCDINMAIAEIQHCKEKSDWSSLGTLYINVRMGCQNFGDLQKLTLCIAEILTRDSTGERPGVPFCEFAETVIKNPQHNEGDKIFLGRIGINVMYSYHRVLQWSKGRKVLDKLHEFQIYFTSLKGLTGPERLASRCQIVNVAAEIFLKSGSLDGATWVLRDSEWVIDTAVWPCDRMDVLSRHNLLCALACEYLTKSQYRQTFEILQNLPGFQTCSDTLDVSQYSLLFNKLLDACIESKSLGVSSSVIDFMFSKNVPIDFTLLRGLITTLGRSCLWLKARTYYKSALSLGCYPPLEGNLYRKLLLIPSYMSEVEMLLAIEIFLVSNASNIQSPGATSQTLQIILKRCEEHKMQSKDNYRTAMDRVILAARISDPKLFLKHMTMNINMEQVYSLEHNSAIKWLKENMKWAGKVWLFQ"

     misc_feature    5083..5610
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
ORIGIN      

atgccgcagctccggtccggccgcggattggcggtctcgccccccgggggcggcagccacaggctccggagcagacggggaaggcgaggccgcggggcgggggacgctgccgggggcaggggagaggtggccgagttgcccgcgggtaagggctgggcgagggcgccagggcggaggcgtcagctgctcccctcggtagaggcgctggcaggtggctccggagcagtccagagcacggaggcggaaagcggagactcctcgcggggcctggcggagcaggtggcaggggtggaagagcaggcaggcagcctcccggtcagcgggggcgccgaacgcagggtaggaggcaggagggaaaaggatggagacgctttgactctggggcagcgagtcctggcctttgagggaaagcacaggggcccgaatgaaagaagtggaggcgccgtgggggacgtagggaaaagcaggcagcgctcattttcagagccaggagtgcaggtgccgaaagagccagagagcccagtccaagaggacagacatgcgtcggtggaattggggtctgggggagcagcagagagccctagaaagaggggcaggtgctctttgtctgagccaggaccccaggagaaagaacgatgtcctggggagaggggtgaaagctttttggcagaagtaggcttgtccgggcctctagataaagaaggcaaagaaggcaatctgggaaagcaagacaggctgattgtggaaccaaagttacagaaaccaaagaaaaggggtaggtattccttagggatgtggcagccactaggtgctcaagaactagcaagctcaagaaagagagagaagcattcattagaattggagtcccaaagcttaggccttcaaggagcagtaagtaacttgggggaagtgggtgagcacttctgctctgttttgaagttagagctgcagagcatgggcctccaggaaagtacagagagcccaaagaggaggagtaagcactccatggtagtaccaacaatgatagtcccttatgagggagctgggaatacaataaagagaggcaaattatctgctacaaacctacaaccaataaacttaagccttcagggaggagagagaactgtagggaaaagagccaggagctcctctgtgaaattgtggcgatcaggatcccagaatgaagcagaaattttagagaaagcaagtaaaaatttctctgagggaggaagactctcagaaaacagaaagaagagttcctcaacagaaaaatgggtaactgaatatgtagaggagaggttgatgccaagcagggtttctcttaccgggactactcaagggaacagacaagggaagctggataagcaacaggcttcagggcaagaagttatttctgcacccacaaatgatctgttcattaacagactagaggatgatggtgaaagacagacagatggcaatgaagagactgtggtttcatctgaattaaaattaaagataaggaaacctacaaagaaaaaaggaatggaccttaacgaagttccagatgcacaagttgaaaagcagctagagactgctcagaatacagcaaaagaatccagtgtaaggacatcatcactagtagcttactctgaatcttttcaactacctcagtcagatgggactcaaagcaagagaacagcatcccgttgtttagcaagcggttctgcagtagattgtaatagaacaaaaaataaaatcaccaagatcaagtgtttacagagattgactgtacaaacagctgaaaataaactgacaagcaaatcaatagaatgtaaagatgagtgcagagaagccttgaaacaacataacagtttgctgtccatagcagaaaagaatccagttgtggcactacatgactgccgttaccttaatacttttgtaaagtcttcagttgatggaagcaacaacagttataaaattgatagtggattcttgcacgcactacacggtaaaactgtttgtcctggcagtgttactggacagagtggtatgaatgcagcgcaacctgagagatggtgtgcacgggggattatatcatttgatgaagaaggaacatgccaaaacagagagaagtgtttttcatgctctctaaacagaaataagtgcttcagggaaagcaaatggaatattggtgaaaagcccaggaaaaagatgaagctttttgagagaacagaaaaattagcaacccagaatgttctcccaggcagggtcaacagcgagtgtgaattacatacagaaaataaaactcttgcaatggtttctttggcagttttaggggaattaaatagcaataaaatttgtttatcatcttcatgtgatctaatatcaaatgcccatgtggaaaataatactaaaaaagcactaaatagtctgcctaaaccagtcagtagaaaaatgtgtgtgaaacctggtgccatagaagatagctttgagaagaatcttcagctccctgaagctgcacagagagaaaagtctttctttaatgcagaaagtatggcaccacaagatcattctaacttgaaaagtcctggagtgattagattggtcagtgacatttctaattgctgcagtgattcaggcagttgccagaaaaaattgttgaatgaaaaactgtttaaaaaacctgagaaattgcaagcattcagctgtcaaagagcaataccaatgactggcaaaaatgtttggcctcgtgaatcatgtgctaggacttctgtatggtttcctaaaaaagataaatccatcatagaaaaaaaaaattccttaacttctttccagggctgttcacatcaaaacaccaaaactttgagaggtatggatgtaactgataactccaagcaattagatctgcatatgtccatgacagaaattaacaaacaaaatgcgtgtaaaataacagattctaatacagaatgtttagcttctgttgcaatactagaatcatctctctcagatattaatggagctttgagggtcacaaaagatgaaaacctggagttgtcattagacaaaggtagaagttccatgacttttaactctggcagtgtgcaggaaggcaagataaccttaaatttgtcaggaaaacaaaaacaagataaaaataaaggtgctttaaaagcaaaaaatgtagccatgacttcccaagatagtatgtgcgctgataatgtaggcaaaatgatctgtaaccctgagatgcctgttacaaaacaaactcaggaatttccaggcttagtgagaatgttaagcacaggaaatctgtcaaatttcaaaattcctttactgagaaataaaactgaatccaggaaagtggattacattagatcgtttgaaagagaaacatacagtccactggaacttcttgacaattctgctgctacaccagtaaggcagaacaggagcaaggagaattcccctctagtatattctgacttttttctggccactgcaaaggaaaaagcttaccaaatcaccaataaagaccttggaaatgatgattcagaaagactttcagatgaaaaaaaaagacttgctgaacatgtttctgcatgtccatgggactttcctgagagagagttaatgtcacttacttctgaggatacttttggtactgaatttagagagaaaagtaatgaggctgatcactccagcaaaatagttaaacattctacttcatctgaagtatttgtcaatgatgaaaaaaaattgaaagagaagcctacacagagttcatctacaaactttccagatgttcttaaagcatatgaagatgacattcttgtgatagatgtaattcaggatgaccctgacctttttggaactactaatgaaggggagtttgaactggactgtgaaactgaaaagcatggtaatactctcaccccagtggaaaagcagaattttactcccaaattccataatcttcaagaaaataaggactcaaactattatcatgagtatgcaagagacagtcccattcaagaatctggaacattgcaacctattgcagattcttgtgattccttggtaacagctaatgaaattaataaacatgattcttcaagaggaagcagccctttgggaggtgtaacagaggagtcttctgaggatgggcaacttactgaatcagatgaacacacaaagggttccaatgtggatgagaagtacagattttcaggcaaatcttctgtaaaagaagaaaaagacagcatttatgagaaaagcagtgattctgagtgtgcagaatttgtgagccctgatctttcactaggattgcagctgccttgcctggaagtaaaagcccatcatggaagtacagtacacaaacccgggatgaatgatttcagatattcgggcaagtgcccactcttgccacatcccaattctaactgttacgaaccatggaaaatggacaaaagtgtaccagtttcccactccatccagaaaatcctggagattgaattgccccgtaaatattgcagattttatttcaatacgctgcgtggctgtgagagagcagaatgttggttttggcatgttcctgagcaaggagatgaaaagatttgcatggcagtacttaggacatatataaatatgaatgaaacaagtctgctacaacgtgcagtccagatatttatgaattactacagagaagttattcctggtgtgcattttgatttacaagttctgaatgaccttctgattgctttgctcaagcactgcttgttgaaggaagtatttccgctgttaaacattggtataatgattaaaaggctgccacctattgatgtgattctgaaagtgtttgaacatgtggcttccatgaataatagagaggctgtgcctaaattaatagatgccttttgtaagctttttgatgccggaatgggttttgagtctgaacattttaactatattgttaagttccttcaccaattgcaagtttccagtcaggaaataaatactgttttgaacataaaatccaggtttcaagcaaaacagtttaaaaagaactggctttgtgacataaatatggcaatagctgaaattcagcactgtaaagaaaaaagtgactggtccagtttgggaactttatatataaatgttcgaatgggatgtcaaaattttggtgaccttcaaaaattaactctatgtattgctgaaatactcacacgagactccacaggagagagaccaggagttcctttttgtgagtttgctgaaacagttatcaaaaatccacaacataatgaaggagacaaaatttttctgggaagaattgggatcaatgttatgtattcttatcacagagtactgcagtggtcaaagggcaggaaggttttggataaactacatgagtttcagatatatttcacgagcttaaaaggacttactggtcctgagaggttagcgtcaagatgccaaatcgttaatgttgctgcagaaatatttcttaaaagtggaagtctagatggagccacatgggtattaagagattcagaatgggtaatagatacagcagtgtggccctgtgatagaatggatgtcctcagtcgacacaacctgctgtgtgcccttgcatgtgaatatttgactaaaagccagtataggcaaacatttgaaattttgcagaatctaccaggtttccaaacttgctctgatactctagatgtctcccaatacagccttctttttaacaaacttctggatgcctgtattgagagtaaaagcctgggagtatcttcttctgtaatagatttcatgttttcaaagaatgttcctattgattttactttactgagaggattaattacaacattgggaaggagctgtttatggcttaaagccaggacctattacaaaagtgctttatcattgggttgctatccaccactggaaggaaatttgtatcgcaaacttctgctgattccttcttacatgtctgaagttgagatgctgttggctattgaaatattcctcgtttcaaatgctagtaatattcagagtccaggtgctactagtcagacacttcaaatcatactgaaaagatgtgaagaacataagatgcagagtaaagataattatcgaacagcaatggacagagtaattctagctgctcgtatatctgatccaaagctttttcttaagcacatgactatgaacattaatatggaacaagtttacagtttggaacataattctgctataaaatggctgaaggaaaacatgaaatgggctggaaaagtctggctttttcagtagctattagttggtaatgatttttttgaacagttgaagtaatcattgttggaaaataataaaaatcaataaagactgtttccactgtgtttataccctatgtcttattgattcacagcaacatttgtaaggtttcaaatcgtaagttattcttgaagtgattacagattattttcatagatggaaacacaataatagaataacttttttctagaggcaggtattattgcaggttctcacactggggtcagttcagactctagtgataacattaaaaataccaaaacttttgaaatatttcttctattagaataacaaccttattgttattttgagtggcagcccatatacatgagcactgttgataggtgtatgttcagtgctttcaggctggatgttttatagtcagcagggtcttagtgttgcacatgtccacttcacctgtttttttgtgttttttactcctcagttgggaatcaatctagctactccccagtttccttatacaacctgtattatgtgccagagtatcttgcttccctgagctattaatgcttgtttgtataaagcttattttagtgcagtgttaggctcctttcagttcttcctgcattaatttttttcttacattttctggttttatttttttaatttgtcagaccccatacctctccaccctgctttctaaggtggttgtagcccatctgtgcatcccaattcagaccctagttttctcagtcaaaaacttttggagattatattcccaaatcagttcctgtagctatttcaccttatattgctgactgacttgacaatgtacctctttacacaaaacaggaggataaatccctcaaagtgcatagagctcttgaaaataaaagttataatctgctttctcagccaatataagatgtttcataaaacttaaagtttctgatgcaaataggtgttttcagaggtgatacgcaatggattcacttcagtactatctccatcattttaactttcctggcactgtgatccttgcaccattgcttagcagcaccattgcctttaatagatcactgccaccaactatcttgattctgatgtccatctaatcacagatgactatttatttggcacaagcttaagttgttctacccttggttaataataccagcagcatatgcatctgtttcccaggtggtgacagcttatctggatctattaactgtatcttactaccacggatctctcaagagcatttaccacttgagccttcagccttgttagaactttaattattttcagcatgctttttaaatttatagtactgaaacgttataaagtgtttatggaagaagcaccttctacatcaaccagtttagtactgccttttcctgaggccaaattctaaatcatactcttgagtttgaagtcaataaacagttttccaataagattatgcaacgccttcctctatccttcccacttccatgaaagattcctgactgtaaacccaccatcaatatgacagcagttcttataggcactcagctcactgtactactaccaatggctgtagaactgtttggatttggggagattgaatgactacagaagatgcaactgcctggcatattcctaacgaaaattatgtctgtactaccccaaatgcaagagcagtcaaaaatattcctgatttcttcgttaggtccatatggtggaacattccaacccagtcagcattttgtctttgtctaataccacagcattatctagagataaagttattttaacttctgaaaagagtttgtaaagtctttcagatctaatgaggacagtaccacctattctggatatctctactgagaaggaaggagaaaaaccacacataactggacattctaaacatcctgatgttgggctgttttgccagtacagtatattactaattattggaccccaccaaagttgtgataaacactttagcatcaagttgaaaatttgcagacagcaggtattggataacaggtgccagatctgaacaccgtttatctggtactgagatctttaatggtcacaactattaatgagagttcttaacaaggtcaacagagacctgttcctaaaaagagagagtgctgaactgtgtctatctttccagcaggaaattgtattcaatattagtctgcaaatgagaatttcagaccaacaaacagtgctatcagaatatgattatgcaaacttttgagtcttcctcacattagttttctttttttattattatgttactgatttggcattgtattcacagatctgtaaaactgaagtgtaattatccagttctgctgtagaagcaatcttagatgcacctgatttaattaaaggttcagtttattttctatgtaagaattaaatagatcttatcagagctgcatgtctgggcaaagagccagaaagctctggaaaaactgaacaaaagctgaagatagtgggagtagaattgtgttgaatggtcataaaattgatgtagcatatgggcatcaatacaaaacaaaaagattgcacctgtctttcccatagtaactttgttgctggatctagtcccatgcttaaatcataaggggggatctctaagtgggtgccattggtggaagtttttaaattagtgcttttttatcccaggttacttttgattgtaggagatttgattctagatctctcaatacagctaaatgctccctttttagcttctagctagccttcagtaagagagttttgtgaatatgggcctctgtatggtcataaataactgtttatgggagataagtaccaaacccttgctcgttcactctctctgggaatctcttaaatctctgccaactaacatttcttgaaaaaagttcaacgtttatggagtatgaaatcatacctagaacctcttttcagtc

//