LOCUS       XM_016675143            5343 bp    mRNA    linear   VRT 03-MAY-2016
DEFINITION  PREDICTED: Poecilia formosa testis and ovary specific PAZ domain
            containing 1 (topaz1), transcript variant X3, mRNA.
ACCESSION   XM_016675143
VERSION     XM_016675143.1
DBLINK      BioProject: PRJNA237006
KEYWORDS    RefSeq.
SOURCE      Poecilia formosa (Amazon molly)
  ORGANISM  Poecilia formosa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes;
            Poeciliidae; Poeciliinae; Poecilia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_006800046.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Poecilia formosa Annotation Release
                                           101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Poecilia formosa"
                     /mol_type="mRNA"
                     /db_xref="taxon:48698"
                     /chromosome="Unknown"
                     /sex="female"
     gene            1..5343
                     /gene="topaz1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:103143282"
     CDS             80..4852
                     /gene="topaz1"
                     /codon_start=1
                     /product="testis- and ovary-specific PAZ domain-containing
                     protein 1 isoform X3"
                     /protein_id="XP_016530629.1"
                     /db_xref="GeneID:103143282"
                     /translation="

MPSPLKLAACKATGGQDLGDFIIHEGHSFTAGGNRDMFGSVEGRDAQGSGKVEAAGGNPGSAAAVGGQMSAGTPSEPSSPAKFVQDTHLNLSELAGSEGCLRRSVGASLCIVCEECKYISSRQRTLGKQKPKTSTPESGPSPTMVKIYGRKRAVETVEKIVVWINEYPKVTLCDIAATYDICSHNCGYILPDDLKNKKMRCFKRDMRAGFRIWPSCIGHNSEQGGEAKNSTSSPSVQSGNSICQAESLTEQHKHPEEGTASEVSTPSEHFYNGWTDVDATAPAPFLKRKRTEDDEIRTCVLDQYQLDNAGLESDPIALGIHRDKRMKLGDGVECSRVCSMASKENEVISRPDQNIFSPTEYDAFQMSPVLFSENDELNVDEPELFTCQRVRPYSRELLSSCARTYKSWPFPNSQPRCKVGASATACSETGSSQRSPIDSVTKNSNLPSSSTGENQNMTKLRTVQQPVQSGKSVAPLHCRSVPSSGPGQLGMEPDGGAVSTFLLNRLETNDSTSTTTTHKVLSLSDWEAASALSNSSDPSSSGLSATVFSPLPSMFLSGKIQNTPGKTVKEPQLSTCSPLPFALPNNSFQSLVSSIDFSCDQNNNDECLPMKSPPRLEPYDASPFKPKHLCNVPRQNYVDFDSDGFLLPPELSPITSPYRRILGCTSFESLGSLEDNEEVMNKEETPTDFYLEQVANGNTETSSTSSEHSSKEMEGATTPSTLTDITAFKSLSSPSNTEVHGDEDIKETLDDTEKNVEDSKRSFKQVPLSPKVQATVGSNVPTEDSLSPSSHGEEHTEEEDEEEQCSSTEEESSSYDTEDDQREAEGTKEPETDVLDEVTAYEQDILLVDVVQEDPELFENLPEKSLLNLGPVRDTAPPKKKPIPAIKFSLKTTRSSSVFDQKVTTVTVDLRDDCTEIADEMESRPWRPRCSNITTKNQNPYPQSEHLGRSDRNNSKMDGSLESNFGRLIHPHVTSRIGQCMKSPTKMTDFRRQKSNEYCRQYFSESLSCGFKMCRFQHLPAEGDEKFCVEMVTKFAKNPACLQKAGAVFTGYYQNSPPGAYFSMPVLLTLLWALLKAGMVSNVFSVLRISLAHNIVPGHEFLLALFNYVRDKDLMSFVPELMQLTFKMAGVGLELSLDCIDNVKHSPMFQQATHHNSHNSPASTQNPEYLNLVHGIVEIELCAKQEDWKRMGEVYRSVCQFSQHQNQVERISGRIAIALLSESKDKVSLPFAAFAESVRQNESEENLVKTFVGRIGVSLMLRYHKNHHWIKGRRVVEVMSALKVDYTTLKSLFGNEDGASRCCLITVATELFLLSGSVEGALSTLREHNWFLSSGLWPCEPTDLEARTNLLRRLAGKTSHRDTLEVLCNLPGVKEPSDTFFPPLPPDLIDIDRYSPLFTSHLQVCVERQYLPVAKDLLDFMLSKQLAVDHSMLQMLLEKLGRQNLWLRAREVFKHSLSAGYYPDVSAAPGLMALVVPCQLGEVELALALEMFVAFNASAILPLSDTATSSLSITLKRTQSCEGDYISAGNRLLSAACLPQPKLTVRYTAVNSSQEQLFRLDVSSARRWLRHNHLWASEMWTQRPKSVNPN"

     misc_feature    3614..4138
                     /gene="topaz1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:464250"
     misc_feature    4271..4351
                     /gene="topaz1"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
     misc_feature    4367..4456
                     /gene="topaz1"
                     /note="PPR repeat [structural motif]; Region: PPR repeat"
                     /db_xref="CDD:276811"
ORIGIN      

gcagggttaggttgatgtggtgcgtttgcgccgactcggacagccgagtgaagtcgaccacaatctgaaaacaatcaaaatgccctctccgctaaaactggctgcctgtaaggcaactggaggacaggatttgggtgattttatcattcatgaagggcacagtttcactgcaggggggaatagagacatgtttggcagcgttgaaggcagggatgcacagggctcagggaaggttgaggccgcgggaggcaatccgggctccgctgctgctgtcgggggacaaatgtctgcaggaacaccgtcagaaccgagcagcccagcaaaatttgttcaggatacacatctgaacctctctgaacttgctggttcagaagggtgcttaagaagatccgttggagcctccctctgtattgtgtgcgaggaatgtaaatacatttcctcccggcagaggaccttgggtaagcaaaagcctaaaacctctaccccggagtccgggccgtctcccactatggttaagatctacggcaggaaaagagccgttgagacggtggagaagattgtggtgtggattaatgagtaccccaaagtaacactttgcgacattgcagcaacatacgacatatgcagtcataattgtggctacattttaccagacgatcttaagaacaagaagatgcgttgcttcaagcgggacatgagggctggatttcgaatttggcccagttgtatagggcataacagtgagcaaggtggtgaggctaaaaatagcaccagcagtcccagtgtgcagagtggaaacagcatctgtcaggctgaaagtctgacagaacaacacaaacacccggaagaaggcacagcatcggaggtctcaacgccttcagagcatttctacaatggctggactgatgtagacgccactgctcctgctcctttcttaaaaagaaaacgcacagaagatgacgagatcaggacttgtgtgttggaccaatatcagctggacaatgctggacttgaatctgacccgattgctttggggattcacagagacaaaagaatgaagcttggggatggagttgagtgcagcagagtttgtagcatggcctcgaaagaaaacgaagtaatcagtagacctgatcagaatattttcagtcccactgaatatgatgcatttcaaatgtcaccagtgctgttcagtgagaatgatgagttgaacgtggacgaaccggagcttttcacttgccagagagtaaggccgtattctagggaattacttagttcgtgtgcgcgaacttacaagtcctggccttttccaaatagtcagccgaggtgtaaagttggtgcttctgccacagcctgttcagagacgggttcatcacaaaggagccccattgactctgtgacaaagaattcaaacctgcctagttcatccacaggagaaaaccagaacatgacaaaacttaggacagtgcaacaacctgtgcagtccggaaaatctgtagcccctcttcattgtcgttccgttccatcttcaggcccgggtcagcttggtatggaaccagacggtggagctgtatcaacttttctgttgaaccgccttgaaacaaacgactccacctctactactaccacccacaaagtgctcagtctgagtgactgggaagcagcctctgctttgtctaattcatcagatccatcatcaagcggcctttctgccacagtgttttctccactcccttcaatgttcctatcagggaaaatccaaaacactccagggaaaacagtcaaggaaccccaactctccacctgcagtcctttaccctttgcacttccaaacaactccttccagagtcttgtatcctccatcgacttcagttgtgaccagaacaacaacgatgaatgtctcccaatgaagagcccacccagactggaaccatatgacgcaagtccgttcaagccaaaacatttgtgcaacgtccccagacaaaactatgtggactttgactccgatgggtttctgcttccaccagagctctcccccatcacctctccatataggcgcattttagggtgtacctcattcgaaagcctgggaagtttggaagataatgaggaggttatgaacaaagaagaaacaccaacagatttttacttggagcaagtggctaatggcaacactgagacctccagtacttcttctgaacactccagcaaagaaatggaaggcgctacaactcccagtacgctgactgacatcaccgctttcaaatcgttgtcttctcccagcaacactgaagtgcatggtgatgaggatataaaggaaactttagatgacacagagaaaaacgttgaggacagtaaaagaagtttcaagcaagttcccttgagtcctaaagtacaggcgaccgttggctcgaatgtcccgactgaagacagcctgtctcccagcagccatggtgaggaacatacagaagaggaagacgaagaagagcagtgctcttctacagaagaggagtcgagctcttacgacacggaagacgaccaaagagaagcggaggggaccaaagaaccggagaccgacgttttggacgaggtcacagcttacgaacaggatatcttgctcgttgacgttgtgcaggaggatccagaactgtttgaaaacctgccagagaagagcctgctgaacctgggccccgtcagggacaccgctcctcctaaaaagaaaccaatcccggcaataaagttttcattgaagacgactagatcatcatcagtgtttgatcaaaaagtgacaacagttacagtcgatcttcgtgacgactgtactgaaattgcagacgagatggaaagcagaccttggagacctcggtgtagcaacataactaccaaaaatcaaaatccataccctcaaagcgaacatctgggccgatctgatagaaacaacagtaaaatggatggatccctggaaagtaattttggtcgactcatccatccacatgtgacctcaagaataggacagtgtatgaaaagcccgactaaaatgacagattttaggcgtcagaaatcaaatgaatactgtagacagtacttcagtgaatcgctgtcctgtggcttcaaaatgtgtcgcttccagcatctgccggcggagggggacgagaagttctgtgttgaaatggtgacgaagttcgccaaaaatccagcgtgcctccagaaagctggtgctgtgtttaccgggtactaccagaacagcccaccgggggcgtacttctccatgccggtcctcctcaccctcctctgggctctgctgaaagccggcatggtgtccaacgtcttctcagtcctccgcatcagcttggcccacaacatagtgccgggccacgagttcctgctggccctctttaactacgtgagggacaaggatctcatgagcttcgtgcctgaactgatgcagctcactttcaagatggccggcgttggtttggagctgagcttggactgcatagacaacgtaaaacacagccccatgtttcagcaggcgactcatcacaactcacacaactcgcctgcctccacgcagaatcctgagtatctgaatttagtgcatgggattgttgaaatagagctttgtgccaagcaggaagactggaaacggatgggagaggtgtacaggtccgtctgccagttcagccaacaccagaaccaggtggagcgcatcagcggtcgcattgctatagcgcttctatctgagagcaaagacaaggtctcactgcctttcgctgctttcgctgagtcagtgcgccaaaacgaaagtgaggagaacctggtgaagacttttgtgggccgaatcggagtgtctttgatgttgagataccacaaaaatcaccactggattaagggccgcagagtggtggaggtgatgtccgccttaaaagtcgactacacaacgctgaagagcttatttgggaacgaggacggagcgtcgcgctgctgcctgatcactgtggcaacagagctcttcctcctgagtgggagcgtggagggagcgctaagcacactccgagaacacaactggttcctgagttcgggtttgtggccgtgcgagcccactgatctggaggccaggactaatctgctgaggcgtctggctgggaaaacctctcaccgggacaccttggaggtcctctgtaatctgccaggagttaaggaacccagcgacactttctttccacctctacctccagaccttatagacatcgacaggtacagtcctctgtttacgtctcacctccaagtgtgtgtggagagacagtatctacctgtagcgaaagacctgctggacttcatgctgagtaaacagctggctgtcgatcactcaatgctgcagatgctgctcgagaaactgggcagacaaaacctgtggctgcgggcgcgggaagtcttcaaacattctctgagtgcgggatactaccctgacgtatcagctgcccccggtttgatggcgctggtcgtaccctgtcagctcggagaggtggagctcgctcttgccttggagatgtttgttgcctttaatgcgtcagccattcttcctctgtcagacaccgccacttcttccctcagcatcactctaaaaaggactcaatcctgcgagggggactacatctcggcaggtaaccggcttctctccgcggcttgccttccccagcccaaactcaccgtccgttacacagcggtcaactcctcccaggagcagctgttcaggctggacgtttcctccgcgcgccgctggctccgccacaaccacttgtgggccagcgagatgtggacgcagcgacccaaaagtgtcaaccctaactgacctcggtaactattttgacgtctgtaactattttgcgttccagcgtccgtgaactctccgagaaacatcaatgaaatcaggtagaacagcgtgtttctgttctagttctacatttcttttctttacacgcatggcgacccagtcgcaggaaatcacaaccaaagactgatgccagataatcaaactttttatgttcatgtttatttaaagctctttatttttctgaggtagttttgttggctttgactcagagttttaagggagtaacttagaatttatttcttgcggggaacaatcgcatgtaatttttggggggaggggcggagtgggtgttacagtgttatctgtatataaaataattaaatatgtatttatatgaccacattatgttgctgtattgtttgttacaatcaaaactgttgcttgttcaggacctgtaatttacgatttctttgaattaagtttttttattaaaagtttacttctttgtg

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