2025-04-21 02:22:39, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_001328878 2820 bp mRNA linear PLN 13-JAN-2025 DEFINITION Malus domestica protein argonaute 4-like (LOC103427265), mRNA. ACCESSION NM_001328878 VERSION NM_001328878.1 KEYWORDS RefSeq. SOURCE Malus domestica (apple) ORGANISM Malus domestica Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus. COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from KU167607.1. ##Evidence-Data-START## Transcript exon combination :: KU167607.1 [ECO:0000332] RNAseq introns :: mixed sample support SAMEA8717349, SAMEA9239656 [ECO:0006172] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..2820 /organism="Malus domestica" /mol_type="mRNA" /db_xref="taxon:3750" /chromosome="03" /map="03" gene 1..2820 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /note="protein argonaute 4-like" /db_xref="GeneID:103427265" CDS 1..2820 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /codon_start=1 /product="protein argonaute 4-like" /protein_id="NP_001315807.1" /db_xref="GeneID:103427265" /translation="
MDSIEPDGNATNGVNGANGANVVNGANGVNGANGAEDALPPPPPVIPPDVVPLHVEADNIPEPVKKKPARVPIARRGLGTKGTKIPLVTNHFKVNVTNIEGYFFHYSVSVAYEDGRPLDGKGAGRRIIERVHETYHSELGGKDFAYDGEKSLFTVGSLPRNKLEFAVVLEDVPSSRNNGNCEPDGPGSPNESDRKRLRRPNRSKTFNVEISYAAKIPMKAIGDALRGQESENSQEALRVLDIILRQHASKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQSVRDPFQLDWTKAKRTLKNLRVKTSPSNQEFKITGLSEKPCREQTFTLRNKQAKEGEDAEIEVTVYDYFVNHRNIQLRYSADLPCLNVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRASLVEKSRQKPQERMSVLSNALKINNYDAEPMLHSCGVSIGGSFTQVEGRVLPAPKLKVGNGDDFFPRNGRWNFNNKTLVKPTKIEKWAVVNFSARCDLKALVRDLIKCGDMKGIKIEAPFDVFEENPQSRRAPPLVRVERMFEDIQSKLPGQPQFLLCLLPERKNSALYGPWKRKNLAEYGIVTQCIAPTRVNDQYLTNVLLKINAKLGGLNSLLAVEYSPSIPVVSKAPTIILGMDVSHGSPGQSDVPSIAAVVSSRQWPLISRYRASVRTQSPKVEMIDSLYKRVSDTEDDGIMRELLLDFYTSSGKQKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDETWSPKFVVIIAQKNHHTKFFQPQSPDNVPPGTIIDNKICHPRNNDFYLCAQAGMIGTTRPTHYHVLLDDVGFSADELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQMSQFMKFEDASETSSSHGGLTSAGAVPVPQLPRLKENVSSSMFFC"
misc_feature 181..2817 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" exon 1..321 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 322..527 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 528..752 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 753..889 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 890..987 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 988..1085 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1086..1251 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1252..1368 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1369..1476 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1477..1539 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1540..1653 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1654..1819 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1820..1932 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 1933..2070 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2071..2201 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2202..2267 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2268..2331 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2332..2443 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2444..2517 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2518..2612 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2613..2644 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" exon 2645..2820 /gene="LOC103427265" /gene_synonym="AGO4.1; argonaute" /inference="alignment:Splign:2.1.0" ORIGIN
atggattcgattgagccagatggaaatgcaacaaatggggtgaatggagctaatggggcaaatgtagtgaatggagcaaatggggtgaatggagctaatggggcagaggatgcgttgccacccccacccccagttattccaccagatgttgttcctttgcatgtggaagcagataacattcctgaacctgttaagaaaaaacctgctcgggtccctattgctaggcgtggccttggaaccaagggaacaaaaatacccttggtcacaaatcacttcaaagtgaatgttactaatattgagggttacttcttccattatagtgtttctgtcgcttatgaagatgggcgtccgcttgacggcaagggtgctggaagaagaataattgaaagggtgcatgagacataccactcggagttaggtggaaaggactttgcctatgatggggagaagagcctgtttactgttggatcccttccgcgcaacaaacttgaattcgccgttgttttggaggatgtgccatcaagcaggaacaatggaaactgtgaacctgatggtcctgggagtccaaatgagagtgaccgaaagagattacggcgtccaaatcgctccaaaacatttaatgtggagatcagctatgctgcaaaaattcccatgaaagcaattggagatgctcttcgtggtcaagaatcagagaattctcaagaagctttgagagtcctggatatcatattaagacagcatgcatcgaagcaaggatgcctcctagttcgccaatcattcttccataatgatccaaaaaattttgcggatgttggaggtggtgttcttgggtgcagaggattccattcaagttttaggaccacccagggtggcttgtctctgaacattgatgtatcgactaccatgatcatacagccagggccggtggtagactttttaattgccaaccaaagtgttagagatcctttccaacttgactggacgaaggctaaaagaacactcaagaatttgagggtcaaaacaagtccgtcaaatcaagagttcaaaataactggattgagcgagaagccatgccgagaacagacttttacattgagaaacaagcaagcaaaggaaggggaagatgcagaaatagaagtgactgtttatgattattttgttaatcatcgtaatatacagctgcggtactcggctgatctaccctgccttaatgttgggaaaccaaaacgtcctacttatatccccttggagctttgttctttggtgtccttgcaacgttacacaaaagctctttccacccttcaaagagcttcgctggtggagaaatcaaggcagaagccacaagagaggatgagtgttttgtctaatgctttgaaaatcaataattatgatgctgaaccaatgctccactcatgtggtgtttcaattggtggtagctttactcaagtggaaggccgtgttcttccagccccaaagcttaaagttggtaatggtgatgatttcttccctcgaaatgggcgctggaatttcaacaacaagacacttgtcaagccaactaagatagaaaagtgggctgttgttaacttctctgcacgctgtgatctaaaagccctcgtccgtgatctgatcaaatgtggagatatgaaaggaattaaaatcgaggctccatttgatgtgtttgaagagaatcctcagtctaggcgcgccccacctttggttagagttgagaggatgtttgaggatatacagtccaaacttcctggacaaccacagtttcttctctgtttgcttccggagagaaaaaattctgctttatatggtccatggaagcggaagaatctggctgagtatggtattgtgacacaatgcattgctcccacaagggtcaatgatcaataccttacaaatgtcctgttaaagatcaatgcaaagcttggtgggttaaattcattgttggcagttgaatattctccttctatccctgtggtttccaaggctcccactatcatccttgggatggatgtgtcccatggttctcctgggcaatctgatgtaccctcaattgctgcggtggtaagctccaggcagtggccactgatttctcgctacagggcatctgttcgaacacaatcccccaaggtggagatgatagactctctgtacaaacgagtttctgacacagaggatgatggcattatgagagagctgcttctggacttctatacaagttcaggcaaacagaaacctgaccagattatcatcttcagggatggagtaagcgaatctcaatttaaccaagttttgaacattgaactggatcaaatcatagaggcttgcaagttcctggatgagacttggtcccctaaatttgtggtgatcattgctcagaagaaccaccacacaaaattttttcagcctcaatccccagataatgttcctcctggaacaattattgacaacaaaatttgtcacccaagaaacaatgacttctatctatgtgctcaagctggaatgattgggaccacgaggcctactcactatcatgttctgttagatgatgttggtttttcagccgatgagctgcaggaactagtgcattcactttcatacgtgtaccagagaagtaccaccgccatttccgtagttgcccccatttgctatgcacatttagctgccactcagatgtcacagttcatgaaattcgaagacgcgtctgagacatcttcaagccatggcggtcttacctctgctggagctgttcctgtcccgcagctgccgaggttgaaggagaatgtgtccagttccatgtttttctgttga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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