LOCUS       NM_001086240            1356 bp    mRNA    linear   VRT 19-AUG-2024
DEFINITION  Xenopus laevis claudin 7 L homeolog (cldn7.L), mRNA.
ACCESSION   NM_001086240
VERSION     NM_001086240.1
KEYWORDS    RefSeq.
SOURCE      Xenopus laevis (African clawed frog)
  ORGANISM  Xenopus laevis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae;
            Xenopus; Xenopus.
REFERENCE   1  (bases 1 to 1356)
  AUTHORS   Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W.
            and Richardson,P.
  TITLE     Genetic and genomic tools for Xenopus research: The NIH Xenopus
            initiative
  JOURNAL   Dev Dyn 225 (4), 384-391 (2002)
   PUBMED   12454917
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC048771.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048771.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00012418, SAMN04111068
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1356
                     /organism="Xenopus laevis"
                     /mol_type="mRNA"
                     /db_xref="taxon:8355"
                     /chromosome="3L"
                     /map="3L"
     gene            1..1356
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /note="claudin 7 L homeolog"
                     /db_xref="GeneID:379396"
                     /db_xref="Xenbase:XB-GENE-6078955"
     exon            1..362
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    86..88
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /note="upstream in-frame stop codon"
     CDS             140..781
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /codon_start=1
                     /product="claudin 7 L homeolog"
                     /protein_id="NP_001079709.1"
                     /db_xref="GeneID:379396"
                     /db_xref="Xenbase:XB-GENE-6078955"
                     /translation="

MANSGLQLLGFVLAMLGWIALIAATIMPQWKMSSYAGDQIITAVAIYQGLWMSCATQSTGQIQCKVYDSILQLDASLQATRALMVVSIILGIFGIAVSTMGMKCTTCGGDDKVKKSRIAMTGGFVFLLGGLAALIACSWYGNQIIRDFYNPLLPINTKYEFGAGVFLGWAGSFLVLIGGGLLSCSCSRKNNYQKGYPKSGAKSKVPSSGRDYV"

     misc_feature    149..685
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; pfam00822"
                     /db_xref="CDD:395662"
     misc_feature    149..685
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /note="PMP22_Claudin; Region: PMP-22/EMP/MP20/Claudin
                     family"
     exon            363..527
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /inference="alignment:Splign:2.1.0"
     exon            528..612
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /inference="alignment:Splign:2.1.0"
     exon            613..1343
                     /gene="cldn7.L"
                     /gene_synonym="cldn7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gagcgagaggagcggatcgggctgtttgttggtgtcgctggtagaaagtggtggatcgctgagcagttgggcccctgtgtgtcgctagagatccccgagcttcttgtcccggggccacacactcgttcttgccccagtcatggccaactccgggctgcagctcctcggcttcgtgctggcgatgttgggttggatcgcactgatcgcagcgactattatgccccagtggaagatgtcctcgtacgccggggaccagatcatcaccgccgtggccatttatcagggactgtggatgagttgcgccactcagagcaccgggcaaatccagtgcaaagtctatgactccatattacagctggacgcatctctgcaggccacccgggccctcatggtggtctccatcatcctgggcatatttggaattgccgtatctaccatgggcatgaaatgcacaacctgtgggggagatgataaggtgaaaaagtctcgcattgcaatgactggtggatttgtctttctccttgggggtcttgcagctctcattgcctgctcctggtatggcaatcagattattcgggatttctacaaccctcttctgccaatcaataccaagtatgagtttggtgctggtgtgttccttggctgggccggttccttcctggttcttataggaggaggcctgttgtcgtgctcatgttcccgcaagaataactaccagaaggggtaccccaagtctggagcgaagtctaaagttccatcttctggaagggactatgtctgatcatgcaaaccttgttacacaccttattcaagcagcacacatccaggtcacagccctccacttgcatcccagcattcagcacttaatggagaagaagaactccgattggacagagcttgctatgttgtaccccaccccgaggtggccatgtttggacccttcctgtataatgtgactggcggggtgaagtggagggacactggggtgctgcgtccaactccatttgtgtgactgaagaatgaactgacattttttgtgcttgttaaacctctttattataataatgcagctgattggctgtgctgggcaaatatgtgatatggggggggggcttttatcgttaatgaagtttgtaaagggcattattgcggaattttaactcaaatgcccaattccccagattaacaaaaagcaagtgtgcctgactctgagtcggcttgctcatcgggttgtagggtgccctagaaccccactatgtatcttgtctagatttatatgctttataacttgtagcagatttgtttcgtttttgtaaataaaacacaattttttttcaatggaaaaaaaaaaaaaaa

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