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2024-03-28 17:59:12, GGRNA : RefSeq release 60 (20130726)

LOCUS       XR_172343               2265 bp    RNA     linear   PRI 30-OCT-2012
DEFINITION  PREDICTED: Homo sapiens long intergenic non-protein coding RNA 650
            (LINC00650), misc_RNA.
ACCESSION   XR_172343
VERSION     XR_172343.1  GI:410173689
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_004078109) annotated using gene prediction method: GNOMON,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: NCBI
            Annotation Status   :: Full annotation
            Annotation Version  :: Homo sapiens Annotation Release 104
            Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
            Annotation Method   :: Best-placed RefSeq; Gnomon
            Features Annotated  :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2265
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="21"
                     /cell_line="CHM1htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..2265
                     /gene="LINC00650"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GNOMON. Supporting evidence
                     includes similarity to: 1 mRNA, 1 EST"
                     /db_xref="GeneID:400863"
                     /db_xref="HGNC:44306"
     variation       34
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:189849419"
     variation       69
                     /gene="LINC00650"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:67802964"
     variation       74
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:28685034"
     variation       77
                     /gene="LINC00650"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:201703993"
     variation       81..82
                     /gene="LINC00650"
                     /replace=""
                     /replace="ag"
                     /db_xref="dbSNP:202235940"
     variation       82..83
                     /gene="LINC00650"
                     /replace="ag"
                     /replace="ca"
                     /db_xref="dbSNP:370642129"
     variation       82
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:2154566"
     variation       83..84
                     /gene="LINC00650"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:369981474"
     variation       83
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2154567"
     variation       83
                     /gene="LINC00650"
                     /replace="ag"
                     /replace="ca"
                     /db_xref="dbSNP:370551189"
     variation       108
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:182097405"
     variation       140
                     /gene="LINC00650"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:36019106"
     variation       146
                     /gene="LINC00650"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:186390737"
     variation       251
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371894609"
     variation       289
                     /gene="LINC00650"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143177912"
     variation       297
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:191198625"
     variation       399
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:140639106"
     variation       506
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:190384364"
     variation       507
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:183006337"
     variation       516
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372977481"
     variation       567
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:766425"
     variation       573
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:73899913"
     variation       667
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:766424"
     variation       674
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:766426"
     variation       852
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:374515540"
     variation       1012
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:116619065"
     variation       1014
                     /gene="LINC00650"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:766423"
     variation       1066
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:187157244"
     variation       1101
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:7283594"
     variation       1130
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:145891436"
     variation       1136..1137
                     /gene="LINC00650"
                     /replace=""
                     /replace="at"
                     /db_xref="dbSNP:375680441"
     variation       1205
                     /gene="LINC00650"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:79831730"
     variation       1255
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138451928"
     variation       1280
                     /gene="LINC00650"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:142962286"
     variation       1347
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:192501395"
     variation       1645
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:9808726"
     variation       1767
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:77356129"
     variation       1786
                     /gene="LINC00650"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:75454836"
     variation       1816
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:371169051"
     variation       1817
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:183891924"
     variation       1826
                     /gene="LINC00650"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:62226713"
     variation       1922
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:112148335"
     variation       1946
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:191499658"
     variation       1976
                     /gene="LINC00650"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:71326987"
     variation       2015
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:77651301"
     variation       2057..2062
                     /gene="LINC00650"
                     /replace=""
                     /replace="tgct"
                     /db_xref="dbSNP:78401661"
     variation       2062..2063
                     /gene="LINC00650"
                     /replace=""
                     /replace="gctt"
                     /replace="tgct"
                     /db_xref="dbSNP:10674849"
     variation       2067..2068
                     /gene="LINC00650"
                     /replace=""
                     /replace="gctt"
                     /db_xref="dbSNP:34843866"
     variation       2067
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:77252317"
     variation       2100
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:56173503"
     variation       2120
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375819996"
     variation       2207
                     /gene="LINC00650"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:182578966"
     variation       2240
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:149264539"
     variation       2247
                     /gene="LINC00650"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144459364"
ORIGIN      


agcaggcttcgtgagctggggaagtgccagaagcagccttcgaattagacagacctggacccaaaccctttctcttcccccaacccattttggcatcttggcacgagactgtccccatttctggaaagggtgttcacaagaacagtctggctgggttgttgggatgaccgagtgtgatcatgcgtctctatggctggccatggtgtttattcgatggcaggtattaccaggatggagcgagtcccagtaggaagggcctttaggatgtcatctggttccacccaacagggatgggaactgtaattccccactctccctgtggagaatcagggcgggctccggatggatggccaaaggctgcacagaggcgctcctgtgaagaggaagcctcaggagggagtgagagcagaagggagcccacctgtggttgtctcagcaacagcagaagaacctgggccgctgggagtggagttggagagaaacaggttgatttggaagttcttctgcaggtagaacggaaaggcgaattctgcaagatgctctggggtccactgagctcagctgctgaggctcagctctttctgtggcttcttcttgagcagcctgttgaccaagatgtggcccatgccactccctatattcggagtccattttctgatgccctctttcagctcttcgcctgcactcatctgtgactgcctggtactgctaggaagcctctgtttgtgtctcatctctccaggtggactggagctcctgggggtcctttcctttgtgggggttctcaatatcagaatggagtcgcttatgtcaaaccctaacaaaatggaggtggaggtcacgaattggagcctatatgcgtgcctgtaacaggacttgtcacaaggaatccctgcacatatgtgtatgatggggactatgccaggaactcctcacatatggaggattcgaggtaagccatttgctcaaggacacttacccagcaatggcagcctccactaatgagacatcgccaactcctgtaatcaatggtctttgtttctaaacagcttatgtggaattctccgtttttttgtctgtaaaagttttctttagccccaatctctttggatatgcctatgattcatcatagcacatgtttcccaggttgcaatcccctgcaattcccaaataagctccttttgtggagatcctgtctctctctgtcattatttaggttgacaccttttatgtcctgcattgctgttgatgacacccacatttgtacctcctgcttgaatgtcccctcccccaactccaaaattcctctctctgtctaccctgtacctctatttgaaccactaagaggcatctcagacttaaagtgtcccaaactgagcccctgtgatgcccccagagctgctcctccccaccacctcctcctcagcaatggcagcttgattcttctttgggctttattcagtcccccaactttggagctttcttgacccctctctattgctcacatgccatattcaatgtgtaggcaaatcctttggccctgccttccaaagacatgcagaatctactcacttctcgccacctcgctgtctcactctgcgtcaggccaccctgtgtgtccttgcacaattgcgggagccttggctcgagtcctccagaccttctacctctttgacttcatctagtgctgctccaagccccgtgctcttccttggacacaccaggcatgctgccagcagagcctttgcatgtgctgttccctttgtcgggaagccttttccccagctatctgctcagctcatccgctgtctctttcgtcctcgctcagattccccttctctgtgaagcctttctgaccatcctcattaaaatcaaataaccccacccctccactctcttgcccattttcctcatccatttccccctaggactaatcactctctaacattctctatatatttttctgatatatttgtttatatgtcttgcataaacaaaatgatttggtttatggtctatctcttcttgctagaatgtgagctctacaagggtagggatgcttgcttattttgtcaccgttgtgtccctgactcctaaaatgctgacggtgtggccagctgcatgccctgctgtctctattttgaaactctaacaaaattttggacaagaccctcctctttcattttatgctggacctggaaaattacagagcaggttctgacttccaggcacatggtacgcattcaataaataatctcttgaatg
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