2024-04-25 08:52:29, GGRNA : RefSeq release 60 (20130726)
LOCUS NR_034094 633 bp RNA linear PRI 16-JUL-2013 DEFINITION Homo sapiens MRVI1 antisense RNA 1 (MRVI1-AS1), transcript variant 4, non-coding RNA. ACCESSION NR_034094 VERSION NR_034094.2 GI:378548187 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 633) AUTHORS Kimura,K., Wakamatsu,A., Suzuki,Y., Ota,T., Nishikawa,T., Yamashita,R., Yamamoto,J., Sekine,M., Tsuritani,K., Wakaguri,H., Ishii,S., Sugiyama,T., Saito,K., Isono,Y., Irie,R., Kushida,N., Yoneyama,T., Otsuka,R., Kanda,K., Yokoi,T., Kondo,H., Wagatsuma,M., Murakawa,K., Ishida,S., Ishibashi,T., Takahashi-Fujii,A., Tanase,T., Nagai,K., Kikuchi,H., Nakai,K., Isogai,T. and Sugano,S. TITLE Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes JOURNAL Genome Res. 16 (1), 55-65 (2006) PUBMED 16344560 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DB071465.1 and BC028123.1. On Feb 25, 2012 this sequence version replaced gi:300797283. Transcript Variant: This variant (4) lacks two consecutive internal exons and uses an alternate splice site in the 3' region, compared to variant 1. ##Evidence-Data-START## Transcript exon combination :: BC028123.1, AA393248.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025084, ERS025085 [ECO:0000348] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-36 DB071465.1 4-39 37-633 BC028123.1 1-597 FEATURES Location/Qualifiers source 1..633 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="11" /map="11p15.4" gene 1..633 /gene="MRVI1-AS1" /note="MRVI1 antisense RNA 1" /db_xref="GeneID:100129827" /db_xref="HGNC:43434" misc_RNA 1..633 /gene="MRVI1-AS1" /product="MRVI1 antisense RNA 1, transcript variant 4" /db_xref="GeneID:100129827" /db_xref="HGNC:43434" exon 1..307 /gene="MRVI1-AS1" /inference="alignment:Splign:1.39.8" variation 16 /gene="MRVI1-AS1" /replace="c" /replace="g" /db_xref="dbSNP:113869643" variation 48 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:367611654" variation 154 /gene="MRVI1-AS1" /replace="g" /replace="t" /db_xref="dbSNP:1462940" variation 195 /gene="MRVI1-AS1" /replace="c" /replace="g" /db_xref="dbSNP:16907957" variation 274 /gene="MRVI1-AS1" /replace="a" /replace="t" /db_xref="dbSNP:1979367" variation 280 /gene="MRVI1-AS1" /replace="a" /replace="c" /db_xref="dbSNP:16907959" exon 308..419 /gene="MRVI1-AS1" /inference="alignment:Splign:1.39.8" variation 310 /gene="MRVI1-AS1" /replace="a" /replace="g" /db_xref="dbSNP:375605649" variation 324 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:368923760" variation 331 /gene="MRVI1-AS1" /replace="a" /replace="g" /db_xref="dbSNP:200472330" variation 340 /gene="MRVI1-AS1" /replace="a" /replace="t" /db_xref="dbSNP:375909923" variation 347 /gene="MRVI1-AS1" /replace="a" /replace="g" /db_xref="dbSNP:368228015" variation 357 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:373545447" variation 363 /gene="MRVI1-AS1" /replace="a" /replace="g" /db_xref="dbSNP:376790854" variation 367 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:371383883" variation 368 /gene="MRVI1-AS1" /replace="g" /replace="t" /db_xref="dbSNP:376079865" exon 420..623 /gene="MRVI1-AS1" /inference="alignment:Splign:1.39.8" variation 424 /gene="MRVI1-AS1" /replace="a" /replace="c" /db_xref="dbSNP:185808082" variation 486 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:375132397" variation 550 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:149429287" variation 594 /gene="MRVI1-AS1" /replace="a" /replace="g" /db_xref="dbSNP:189927339" variation 601 /gene="MRVI1-AS1" /replace="c" /replace="t" /db_xref="dbSNP:144853682" variation 605 /gene="MRVI1-AS1" /replace="a" /replace="c" /db_xref="dbSNP:78994316" ORIGIN
aaagccccgccccccgcgcgttgccgggagacggcgcccaaccttcctctgcagcgcccctaccgacccgcgctccgcagctcctgagggctttcgagcccagatggtcatctgagacgagaggtggcggcgaaggagagtctcgcctgtcacgctcccggagcaggggcttcatgaggtggccatggaaacagcctggcagactcccatctctcctggtgccatctccggagcggaaagtggagcgccccgctggcgaccaaggccgcactgagagccctggtttggtcaacagttgggctccaaggagccctggtattccttgaacatgcatacctttcccagcgtgagggacatggaccgtgccgtgcgagggaccccatcttctgcagcaggagggagcagagaagagaacacagccaccctcatcagccagagttcaaaccctgacagtgcccatggagagatctggtccaaggcaccaacctcttcctgctggactgagaaagagcctcctactgtgtctctctttacctcagcttttgcacacctccaatatattgtccactgaagtcagaataatctaaaaataaaggctgattacctcatgtggtataaacttaaaaaaaaaaa
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