LOCUS       NR_027701               6322 bp    RNA     linear   PRI 16-JUL-2013
DEFINITION  Homo sapiens long intergenic non-protein coding RNA 346
            (LINC00346), non-coding RNA.
ACCESSION   NR_027701 XR_041485 XR_041486 XR_041487
VERSION     NR_027701.1  GI:237874147
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6322)
  AUTHORS   Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler
            G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG,
            Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee
            E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI,
            Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C,
            Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T,
            Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB,
            Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K,
            Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T,
            Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH,
            Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson
            A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M,
            Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC,
            Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL,
            Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC,
            Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M,
            Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu
            AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones
            SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S
            and Malek J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res. 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AJ295981.1, AL157875.27 and BX647632.1.
            On or before Jul 18, 2009 this sequence version replaced
            gi:239744879, gi:239750582, gi:239756031.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BX647632.1 [ECO:0000345]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-276               AJ295981.1         43-318
            277-5773            AL157875.27        107209-112705       c
            5774-6322           BX647632.1         5715-6263
FEATURES             Location/Qualifiers
     source          1..6322
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
                     /map="13q34"
     gene            1..6322
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /note="long intergenic non-protein coding RNA 346"
                     /db_xref="GeneID:283487"
                     /db_xref="HGNC:27492"
     misc_RNA        1..6322
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /product="long intergenic non-protein coding RNA 346"
                     /db_xref="GeneID:283487"
                     /db_xref="HGNC:27492"
     exon            1..6322
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /inference="alignment:Splign:1.39.8"
     variation       236
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2277424"
     variation       398
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2277425"
     variation       699
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:376446745"
     variation       1305
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:927879"
     variation       1358
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:927880"
     variation       2297
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1041182"
     variation       3981
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:73128562"
     variation       4259
                     /gene="LINC00346"
                     /gene_synonym="C13orf29; NCRNA00346"
                     /replace="a"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2391868"
ORIGIN      

aaacgccctccagggtgatgactgtgggagcaaaactgaccggaacctgggcggtgcatgcactgtgcaccctcctggttaacagccccacggcccgagagctgtgctttacatgaatgtcttctgttaaagcagctcgtgtggcttctgcaccctggtggagccaacacacgtgcctgtcacggaggtgaggagtgagtgagttctcaccagcatttgacgctgaccttccggagacatggcgtccctgagagcctgcagcctgccagagcagagagccacccgctggccgttctgttggaatttcggagttcctgtctttcaggcaacatctgccaagcgcggtttgtgtaaggaaacccattctgtcgtgtctgccggggcccagggcggctgctgtgcgggaaccagcttttgtggcccatggagcaacgactcagtctggggctcggctactctccggcccggggtactggcatttccctggggcccatggggcgagtgcccctatttttcccatgaggcctcagccaagaggaggttcgggaagaaaggaaaacacaggtgaggagagagaagggcgggcagagaggtaccacgccattagtgctgatggggagaggcggctccagcccggcactgctgtccttacgaggcatgtttcctttttattcggaggaagagaagcagaggaacacgtcatggagacggaccgagttgaaggagccagggatggtgacaagcggaaggaagtgtgttttgtccccatccagggaagcttttgtttcatgagacttacttgcgcacgtctggtagctgccctggacattcatggactttcgttttcactcagattttgtggttcacgtgacacaaagcatgaggacatcactgggcgagagggccaggtcaccccactgccgaggggcacgccccagctgtgcaccgctagagtgggcttgtccagtcctcggacacggggacagggtgtgcccatctcatgtaagacatgaataatagtagaaatttctgttgcatgagaactctctgcattatcctcaccattttcctgtaagcgtaaaacgtctaaaacttttttatgagcacactaattcctcacttaaggtcgtcattaggttcttggaaatggcaactttaaacaaaaggacagacagcaggtcctcaaataacattctttccttcaacatcatttcatcctaaggagaaaaaaatggattttgttacatatcctggttcatttccaagaaccaggtgggcatagaattgaccaaaggtggaggagaacagatgtgcggctccgtcctggctgtgtggctccgtcctgtggactaatgcgtgtggacagtcaggaacactttcaggacaatgtgggtggcctgccaatgggacctattccagaggtctgagaagaaaccgttgtttaacctagaatcctgctaggaatcaaactagctttgacaggaaaaggaaaaagaatgaggactctgaacagggacagactcagaacaattcttatccactcatagtttaggaaataatcttacagcatgtgctccaccagggtcaccaactgtcccaatttgcttgggactgaaggtttgtttgtttttgtttctttgttttgagacagagcgtctctctctgttacccaggctagagtgcaatggcgtgattttagctcactacaacctccactttccaggttcaagcaattctcctgtctcagcctccctgagtggcagggattacaggaacccaccaccatgctggctaatttttcaatatttagtagagatggggtttcaccatgttggccaggctggtctcgaactcctgacctcaagtgatccacttgcctcagctcccaaagtgctgggattacaggcatgagccaccgtgcccagcctactgaggggtttttatggacatgggacttttaatgctaacactaggacagtctctgtcagactgagatgatggtcactctttggccaaacacctccaccactgccccgcaacatccataatagcaacagtttgagtaaagacacaagtaccatttgcggtccaaatacttgagtgtgtaaacggtgcattgggtgtgcacagcggtacccagaatctccaactagctcctcatgagctgggtggggcatgcagggaaggaggcaaagcttcccacctgtctggggaggctgtgggctccacctctgcagactttggtaggagaccagtgttcatgcagttgtagtaatgcacgtgtagcttagggtttttttgggactaaactatggacaaagcacagaactcagttgtctctgtagaaaagggtggcctgtcacccggtaccaggtgaggggagtgtggcagtggcaagagcacctggtggtggccgagaggaggcacggaggagagtcagggtaccgtgccctcatggagtgagtgcggaagacaaaacaacagacacagttgtaatgacattactttatttggggttaaattagggtgcacatcacagaaaatcctcaaaccacagggaatgaaatggaagttgtttctctctggtaaaacaagtctgaaagctgcagtgtcatcagatccacggccctgcatctctgccacaccccaccatgcacctccagtcctcccggcctgtggcttccagggctccaggaactagggagggacagacactgggatcttctgccatgaagcagagagggatgctggggaaacacatgggcactcgctgccacaagtgcctcctggaaaagcaaaacccaatgccatggctgcctccctccggcagcaccagcacgagtgagccagatcctcacctttgatcatcaaggctgagaggtaatatctgaggtcgacagatcaagaagtagagacaaaagcaaaccaggctggtggtaaagaggaggaatgaccgtaagatgcctctgaaaagtgggaatatggggaatctcctcttggtttctggttgcacatgtgaatttattgaaaactgaatatattaagatgtgagcttaggagttggcagcctgtggcatggggaggtgtgggaagtggacagtctcaggtcagggtgggctggaaagtggtgccacctcgagaacagtaggttaacatctacccccagtgacgacattcaaaccttcatccagcatccacttccaggggacattttcacaaaatattcacgagagcacacaaaatatacaaaggatgacgagggttgaacattgttgtgacaaaacatgggaagcaacttaagtgccatctgtgggaaacggtctagtggtggagctgtggggctgtgggatactgtgggcgggtgagaaacggagaggcgtctccaagcatcagtgggataaaattgctctatctgtattttcaaaggagaaaaagaacaagccccaagctgtgcatttacacggggacatgagtacatccatctgtaatgcgtctgtcaccccacaacaggaggggttagctgtgcgtggggagagggtgaagaagggcttttgcctggtgctagactgcctgggttcaaatcctgctcctacttagtgctgtgcaatttgggcaaaatacctaaacctctctgtgccttcatttccacctctctaaagcggggtctgtgacaatgcccactcctcattcataaggtggtggtgaggattaaatgagctgatgccctcacaaggtgtttgtccatcagtgatagggtttggctgtggcccctgtgtccccacccaaatctcatcttgaattgtaatcctcataatccccacgtgtcgagggagggatcccgtgggaggtgatcagatcatgggggtggttcccccatgctgtcctcatgataatgagtgagttctcacgagatctgatggttttataaggcagtttccctgctcttacacgctctcttttgcctgccgccatataagacatggcttttccctttccaccatgattgtaagtttcctgaggcctccccagtcatacagaactgtgaatcaatttaacctctttcctttataaattgctcagtctgaggtagttctttatagcagtatgagaatgaactaacacagtaaattggtactgcggagagtagagtattgctataaagatacccaaaatgtggaagcaactatggaactgggtaacagacagagattggaacagtttggagggctcagaaaaaagacaggaagatgtggggaagattggaacatcctagagacttgttgaatggttttgaccaaaatgctgatagtgatgtggacaataaagtccaggctgcggtggtctcagatggagatgaggaacttcttgggaactggagtaaaggtcactcttgctacgctttagcagagactggtggcattttgcccctgccctgagatctgtggaactttgaacgtgagagagataacctgaaattggaacacatgtttacgaagaagcagagcattaacatttggaaaatttgcagcctgacaatatgatagaaaagaaaaacccattttctggggagaaattcaagctggctgcagaagtttgcataagtaacgaggagccaaaggttagtcaccaagacaatggggaaaatgtctccagggcatgtcagaggcttcgcagcagcccctcttagcacaggtctaggagggaaaaatggcttcatgggccaagtctagggccccactgctctgtgcagcctctggactggatgccttctgtcctagctgctgccactcaaactccagtcgtggctaaaaggggccacatacagctcaggctgctgcttcagcgggtgcaagccggaagcctgcacagaattcaagaattgaggtttgggaacttctgcctagatgtcagaggaagtatggaaacagctggctgtctaggcaaaagtttgctgcaagggtggaaccctcatggagaacgttagggcagtgaggaagggaaatatggggctgtagcccccataacagagtacccactgggtcactgcctagtggagctgtaagaagagggccaccatcctccagatcccagaatgtagtcccactgacagcttgcactgtggcctggaaaagctgcagacactcaatgccagcccacgaaagcagccaggaggggggctgtaccttacaaagccacaggagcagagctgcccaagaccatgggaacccacctctttcataagcgtgacctggatgtgagacatggagtcaaaggagatcatttgggagctttaagatttaatgattgcctcactggattttggacttacatggggcctatagcccctttgttttggccaatttctcccatttgaaatggaatcatttacctaatgcctgtacgcccattgtatcttggaagtaactaacttggttttgattttacaggctcataggtggaagggacttgccttgtctcagatgagactttggacttggacttttgagttaagactttgggggacagttggaagggcattattgtgttttgaaatgggaggacatgagattggggaggggccaggggcagaatgataatggtttggctgtttctccacccaaatctcatcttgaattgtaatccccataatccccatatatcgagggagggacatgttgggaggtgactggatcttaggggtggtttcccccagttgttctcatagtaatgagttctcacaagatctgatggttttataaggcagttttccctgctcttgctcgctctgtcttgcctgccgccctgtaagacgtgcctcttccccttctgccataatggtaagttccttgaggcctccccagccatgcagagccatgagtcaattaaacctcttttctttataaattacccagtctcgggtagtatctttacagcagtgagagaacagactaagacaatcagcttctatgttgttggcagttttaccatgagcatggattcctatattccttctgaaattttctttaaaagtgtaagcttatatagaaagtatattcgacactcacaacccttcccagccataaaagacagtggggtgtgagtgtgtgggatgggatgcagcaatggcagcccagtaacaacagcagtgcgtgccgggaacagctcagcagcagggcaggtcagggctaacccagttaactcaatgcaggctccctacaccaagtgatttggtttgcaaataaatattatttgtttctgttttaatgtgtaaacagagcacctgaattacacagtaatgtaactctgaaaattgctaaatttc

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