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2024-04-17 00:32:02, GGRNA : RefSeq release 60 (20130726)
LOCUS NR_027247 3148 bp RNA linear PRI 17-JUL-2013
DEFINITION Homo sapiens POTE ankyrin domain family, member F pseudogene
(LOC100130331), non-coding RNA.
ACCESSION NR_027247
VERSION NR_027247.2 GI:425876801
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AL122093.1 and AL590396.13.
On Nov 29, 2012 this sequence version replaced gi:224586913.
##Evidence-Data-START##
Transcript exon combination :: AL122093.1 [ECO:0000332]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1992 AL122093.1 1-1992
1993-1993 AL590396.13 28894-28894
1994-2231 AL122093.1 1994-2231
2232-2232 AL590396.13 29133-29133
2233-3148 AL122093.1 2233-3148
FEATURES Location/Qualifiers
source 1..3148
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1q43"
gene 1..3148
/gene="LOC100130331"
/note="POTE ankyrin domain family, member F pseudogene"
/pseudo
/db_xref="GeneID:100130331"
misc_RNA 1..3148
/gene="LOC100130331"
/product="POTE ankyrin domain family, member F pseudogene"
/pseudo
/db_xref="GeneID:100130331"
exon 1..31
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 10
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:140640891"
variation 15
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:114772495"
exon 32..154
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 37
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:117739596"
variation 87
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:368735614"
exon 155..307
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 193
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:186070543"
variation 218
/gene="LOC100130331"
/replace="c"
/replace="g"
/db_xref="dbSNP:114905602"
exon 308..410
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 343
/gene="LOC100130331"
/replace="g"
/replace="t"
/db_xref="dbSNP:147398359"
variation 363
/gene="LOC100130331"
/replace="c"
/replace="g"
/db_xref="dbSNP:373221717"
variation 376
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:34478438"
variation 397
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:372242277"
variation 399
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:373580158"
exon 411..559
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 475
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:77518104"
variation 505
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:72753279"
variation 519
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:141224807"
exon 560..734
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 643
/gene="LOC100130331"
/replace="a"
/replace="c"
/db_xref="dbSNP:41311579"
variation 663
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:183919147"
exon 735..908
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 762
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:184760812"
variation 764
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:190003326"
variation 765
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:371295622"
exon 909..1137
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 937..938
/gene="LOC100130331"
/replace=""
/replace="a"
/db_xref="dbSNP:35158862"
variation 956
/gene="LOC100130331"
/replace="c"
/replace="g"
/db_xref="dbSNP:139366826"
variation 1040
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:76218371"
variation 1080
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:150024509"
variation 1103
/gene="LOC100130331"
/replace="a"
/replace="c"
/db_xref="dbSNP:191571101"
variation 1121
/gene="LOC100130331"
/replace="a"
/replace="c"
/db_xref="dbSNP:2275450"
exon 1138..1301
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 1141
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:115924371"
variation 1168
/gene="LOC100130331"
/replace="c"
/replace="g"
/db_xref="dbSNP:12044494"
variation 1181
/gene="LOC100130331"
/replace=""
/replace="c"
/db_xref="dbSNP:112111179"
variation 1239
/gene="LOC100130331"
/replace="g"
/replace="t"
/db_xref="dbSNP:184438097"
variation 1258
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:73114317"
variation 1264
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:189601437"
variation 1281
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:367865543"
exon 1302..1482
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 1312
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:145603667"
variation 1316
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:148459789"
variation 1319
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:1565430"
variation 1339
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:372996337"
variation 1340
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:375087098"
variation 1392
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:183581547"
variation 1403
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:790789"
variation 1444
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:146454642"
exon 1483..1554
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 1507
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:3738014"
exon 1555..3127
/gene="LOC100130331"
/inference="alignment:Splign:1.39.8"
/pseudo
variation 1578
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:113028009"
variation 1625
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:113518305"
variation 1636
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:373872672"
variation 1656
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:368492013"
variation 1733
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:6675035"
variation 1763
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:548164"
variation 1810
/gene="LOC100130331"
/replace="c"
/replace="g"
/db_xref="dbSNP:41305566"
variation 1821
/gene="LOC100130331"
/replace="a"
/replace="c"
/db_xref="dbSNP:6660089"
variation 1870
/gene="LOC100130331"
/replace="g"
/replace="t"
/db_xref="dbSNP:28482009"
variation 1875
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:41308192"
variation 1921
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:376308540"
variation 1941
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:141720451"
variation 1954
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:372373801"
variation 1989
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:185547985"
variation 2020
/gene="LOC100130331"
/replace="a"
/replace="t"
/db_xref="dbSNP:545540"
variation 2108..2113
/gene="LOC100130331"
/replace=""
/replace="gggtca"
/db_xref="dbSNP:80150242"
variation 2114..2117
/gene="LOC100130331"
/replace=""
/replace="gggt"
/db_xref="dbSNP:78088310"
variation 2121
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:2790341"
variation 2143
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:147066646"
variation 2223
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:73095931"
variation 2228
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:138187537"
variation 2439
/gene="LOC100130331"
/replace="a"
/replace="g"
/db_xref="dbSNP:199547433"
variation 2446
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:190023741"
variation 2553
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:191883645"
variation 2689
/gene="LOC100130331"
/replace="a"
/replace="t"
/db_xref="dbSNP:113026540"
variation 3026
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:116207538"
variation 3029
/gene="LOC100130331"
/replace="c"
/replace="t"
/db_xref="dbSNP:73095933"
variation 3056
/gene="LOC100130331"
/replace="g"
/replace="t"
/db_xref="dbSNP:74714736"
variation 3072
/gene="LOC100130331"
/replace="a"
/replace="t"
/db_xref="dbSNP:75709673"
variation 3125
/gene="LOC100130331"
/replace="a"
/replace="c"
/db_xref="dbSNP:367598621"
ORIGIN
cgctgaatccaagagtacaaatgaagtcactgggttcctgggaaagacatgaggctggagagccaggctggtaaacagacagcagccaaagcaggcctgaggatgaagaagcaggtcacagagcaaagtcactccataggaaccagctagtgaggctgcctgctctccactgggaactggacctctgatgatgaactttctccttgtgccatctactctttcatcaagcaaagcttcctgaagcatctgctgtatcaggagctctgctaagagacacagaagagactgtgactaccatttctatcagccaagtaggatactaacaaggctccaaggattaaggtcccagaaaggcctgccacccacagaactttcgagtctacaggaacacctggaggatggatggaaaggagggaccattccaatagcctgccttcctgggaaggagagacttttgcccaggattgaggagacctaagtcctatttccaactttgatgaagacagtggactcctccatgaacaatttactcatccttggacttcccactccaggactgagattacatttgtcctgttgcttccactgaaagaagagccagaaatatgccttagaattttggaagagaactgcccatcttcaaggatggatattggtctccccggagtcgctgacagggttcctggggaagaataagagctcctagcatcgttgatgtagcttcttttagatgggtggaaactcagatcctgctgatggagtacgtacaggcatgccttcaacaggaatagagacttcaggaggcagtgagcagattctagctctggcattgctggggtgaggatatgtctgccctcccaaccctcttctacttttggacttctaaaaagtacctggacaattcagagggaggtagatgactgaagtgtgattttccaaaggcagaaggaggctcgtcacagcctactttatccaaatgggcccttaacctgcagtcctaccagcctctcaaacagcgaaactttgcagctggcagagatgtgtatgacacacctgtgctgccaatcactgaagaaaccatgtcttgaggaacctaaggagaaaaactcagtggcaattgcttgtcagtgaaaacagtcgcggcacacagggagagatccactgaccctgtggggctggtccctacatctggcgatctgacgtggggctctccctcgctgtgtgaagttgcaccctgagtgtgggatcagcagaggagttcaacgagatattcctgaggattgcggtcaataaacttggtgaccttgaggatgttgcaggaagaagagagagggcctcgtttgggagctgttcacctctgtcctaatacagggcaccaggtcctgttccaatggcagacagcatgggaagccattaatgtgcctgagttctgcagtcagacagctggtgttggatcctctaaccaactctgtgactggacaggagttatagcctctttccaagtgaattatgaagagcaagagcaagtgtggataatatggaagctcattccaggatgttcaagctcagtcgcccccgccagcctgttcaccgtgttatcctgctgctctgctgccccactcctccaccagtcacgatggaagaagagatcgccacgcttgccattgacaatggctccagcatgtgcaaagctggctttgctggggacgatgccccccaagctgtgtttccctccatcattgggcacccccggcacaagagcatgatggtgggcatgggccagaaggactcctacgtgggcgacaaggcccagagcaagccggcatcctgaccctgaagtaccccattgagcatggcatcgtcaccaactgggacgacatggagaagatctgggaccacaccttctacaatgagctgtgcgtggccctggaggagcacccagtgctgctgatcgaggcctgcccgaaccccaaggccaacagagagaagatgactcagatcatgtttgagaccttcaactccccggccatgtatgtggccatccagcccgtgctatccctctacgcctctgggcgcaccagtggcattgtcagggactctggagatggggtcagggtcactcacacggtgcccatctacgtgggctatgccctcccacatgccgtcctgcatctggacctggctggcagggacctgacaggctacctcatgaagatcctcaccgagcgtggctacagcttcaccacctcggcccagcgggagatcatgccccacatcagggagaagctgtgctacatcaccctggacttcgagaaggagatggccacggccgcatcttcctcctccctggagaagagctagagctgcccaatggccaggtcatcaccatcggcaataagccatcccggtgccactaatgtggcaaagccaaaattttaaccaaatctgatttcagtgctctgacccagaaagttcttatgctcacatcagctattcagatgttaacatttggtattttaaattacagaatgatacatatctgagatagacctcttcaagtcttccttataaattagaaactaaagatttttcaaacagaaatactttcaacttttcaagaagctttaattttgtctcataagatgtgaatcgactggatctgttatttagaatgattagcacactgggagtactggcagcaaagcctttgaaattgataaaaatatgtgctgtaatcggacagagatcatccatttgttacgccattccaaagttccctgttattgcctgtgacatttcccaaatcatctagagattcaagctgttagaacagtttcttttatcagtcatctccagaggctcatcaaactgagaattgtataattttgtatttttaaatccatgtggcacttgccacagacagaacctttggaagatgatattgttggtgtctagcctttggttaagatcaacacttgatgggtgatttttaatattaataaaaacagctagcttaatgttaagtctttgttcttttaaaagactgaagagaagagaaatagagtaactacacttgtgatatcacctagtatatattaatacattaaatatgaaaattcagtgaaaaaaaaaaaaaaaaaaaaaaaaa
//
by
@meso_cacase at
DBCLS
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