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2024-04-25 14:28:41, GGRNA : RefSeq release 60 (20130726)
LOCUS NR_027138 1790 bp RNA linear PRI 16-JUL-2013
DEFINITION Homo sapiens MRGPRG antisense RNA 1 (MRGPRG-AS1), non-coding RNA.
ACCESSION NR_027138 XR_039843 XR_039844 XR_039845
VERSION NR_027138.1 GI:224493993
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1790)
AUTHORS Gerhard DS, Wagner L, Feingold EA, Shenmen CM, Grouse LH, Schuler
G, Klein SL, Old S, Rasooly R, Good P, Guyer M, Peck AM, Derge JG,
Lipman D, Collins FS, Jang W, Sherry S, Feolo M, Misquitta L, Lee
E, Rotmistrovsky K, Greenhut SF, Schaefer CF, Buetow K, Bonner TI,
Haussler D, Kent J, Kiekhaus M, Furey T, Brent M, Prange C,
Schreiber K, Shapiro N, Bhat NK, Hopkins RF, Hsie F, Driscoll T,
Soares MB, Casavant TL, Scheetz TE, Brown-stein MJ, Usdin TB,
Toshiyuki S, Carninci P, Piao Y, Dudekula DB, Ko MS, Kawakami K,
Suzuki Y, Sugano S, Gruber CE, Smith MR, Simmons B, Moore T,
Waterman R, Johnson SL, Ruan Y, Wei CL, Mathavan S, Gunaratne PH,
Wu J, Garcia AM, Hulyk SW, Fuh E, Yuan Y, Sneed A, Kowis C, Hodgson
A, Muzny DM, McPherson J, Gibbs RA, Fahey J, Helton E, Ketteman M,
Madan A, Rodrigues S, Sanchez A, Whiting M, Madari A, Young AC,
Wetherby KD, Granite SJ, Kwong PN, Brinkley CP, Pearson RL,
Bouffard GG, Blakesly RW, Green ED, Dickson MC, Rodriguez AC,
Grimwood J, Schmutz J, Myers RM, Butterfield YS, Griffith M,
Griffith OL, Krzywinski MI, Liao N, Morin R, Palmquist D, Petrescu
AS, Skalska U, Smailus DE, Stott JM, Schnerch A, Schein JE, Jones
SJ, Holt RA, Baross A, Marra MA, Clifton S, Makowski KA, Bosak S
and Malek J.
CONSRTM MGC Project Team
TITLE The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC)
JOURNAL Genome Res. 14 (10B), 2121-2127 (2004)
PUBMED 15489334
REMARK Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
Morin, Ryan]]
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC109309.5.
On or before Mar 5, 2009 this sequence version replaced
gi:169202492, gi:169203265, gi:169202650.
Sequence Note: The RefSeq transcript was derived from the reference
genome assembly. The genomic coordinates were determined from
alignments.
##Evidence-Data-START##
Transcript exon combination :: AK093421.1, DB039215.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084, ERS025085 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-228 AC109309.5 116283-116510 c
229-1790 AC109309.5 111711-113272 c
FEATURES Location/Qualifiers
source 1..1790
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="11"
/map="11p15.4"
gene 1..1790
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/note="MRGPRG antisense RNA 1"
/db_xref="GeneID:283303"
/db_xref="HGNC:26691"
misc_RNA 1..1790
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/product="MRGPRG antisense RNA 1"
/db_xref="GeneID:283303"
/db_xref="HGNC:26691"
exon 1..228
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/inference="alignment:Splign:1.39.8"
variation 158
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:182921716"
variation 176
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:374449215"
variation 225..226
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace=""
/replace="g"
/db_xref="dbSNP:34567116"
exon 229..1790
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/inference="alignment:Splign:1.39.8"
variation 262
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:7929163"
variation 304
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:74681176"
variation 313
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:76534550"
variation 335
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:144556188"
variation 336
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:11602794"
variation 362
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:10833491"
variation 379
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:147350396"
variation 386
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:79606774"
variation 388
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:11026002"
variation 419
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:367800669"
variation 439
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:139507059"
variation 462
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:368150110"
variation 483
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:186276657"
variation 484
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:79391326"
variation 554
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:190696082"
variation 586
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:369981838"
variation 623
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:11026003"
variation 632
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="g"
/replace="t"
/db_xref="dbSNP:149880215"
variation 744
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:73412349"
variation 775
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:11026004"
variation 796
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="g"
/replace="t"
/db_xref="dbSNP:12280457"
variation 830
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:181542770"
variation 841
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:73412351"
variation 856
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:12275900"
variation 864
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:117350168"
variation 876
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:144928539"
variation 907
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:149064271"
variation 924
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:185765835"
variation 949
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:190143003"
variation 1008
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:183053704"
variation 1053
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="t"
/db_xref="dbSNP:187391402"
variation 1067
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:10766783"
variation 1094
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:10833495"
variation 1102
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:10833496"
variation 1111
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:368482272"
variation 1136
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:370685844"
variation 1192
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:142910607"
variation 1237
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:115984363"
variation 1261
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:10766785"
variation 1328
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="g"
/replace="t"
/db_xref="dbSNP:192482981"
variation 1335
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:183843028"
variation 1338
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:12280749"
variation 1339
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:55959344"
variation 1386
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:374552293"
variation 1387
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:187967291"
variation 1400
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:141416955"
variation 1422
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:145187233"
variation 1435
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace=""
/replace="c"
/db_xref="dbSNP:56201424"
variation 1447
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="g"
/db_xref="dbSNP:139018521"
variation 1458
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:75528057"
variation 1459
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:140470749"
variation 1514
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:150406949"
variation 1559
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:138195182"
variation 1640
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="c"
/db_xref="dbSNP:149596707"
variation 1668
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:116773968"
variation 1695
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="c"
/replace="t"
/db_xref="dbSNP:143125083"
variation 1709
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="a"
/replace="g"
/db_xref="dbSNP:370017096"
variation 1735
/gene="MRGPRG-AS1"
/gene_synonym="C11orf36; HSD-40"
/replace="g"
/replace="t"
/db_xref="dbSNP:192248130"
ORIGIN
acgtggtagcgcgggcagaccagggggcacgcgctgttgcgcagcaggccgcaggcgttggcgggcagcggcacggccggcagggtcggggtccacaccagggcgcagaggacggccgaggcgtgtctgggccggcagccctggtagcaggcggggaagaggtcggagaggcagcgctccacgctgaaggccgccagcagccagagccccaccgcgaaccacaggaagaacactggacagtaagatgttcttgataagagagtttttccttccacggactgcgttccgcagctcctgggtggggtgcagagtgtgtcagctcaagccagaaattcggtcgtaaagatgctgtttctcttcacgtttctcaaatggacttggcttcggaaatcacttctgcaacacaaaccagcagcctgtgcagctctgggcgggggcatgccggctacccagctcccggcattgttgcacatggctttgaaacgcacggcacagctcgtgtggcccaggggcacctcctgccaccctgcctgctgcctccaccccagatgccggtcctcgctgctctccgggacctctcccggcgtggctccacctcctcctcgaggtcaccgtccaggcctgtttcaactagcgcctccaagccttgcttacctgcctcctgtttgggtgaaacttggagcatctctattaacttagttggtagctccggtcacctgcagtcaccaggggcccagagggacgcacagagggagaccggctgcctgggtccctcctggctgcctcaccatcaggggcgggatgaggagctcagcctcagccacagtgcgcaaggtgaagagttttgatccctcgtacatcctcgagccaggcagggcgcccggcttctatcccaggtagcagagtctcctatcccaggtctccgacggcgaccgcaaccctttgcccgtggaggacttcccctgtctaagggccattgggagtgggatggcctaatttctggggtcgctttctattgggcacttcaaacagtgctgggcaagggcagtcgtttgaggcagcttggagtgaagttcttagggaggaggtcctgcgcagctcggccagccccggtcaggcccaggcagccaccaaccctggtttctccatcacccctgacccctcccacagccccttctcgtgtttgcccaccgtctaggccatgcttccactttctcacctggctgggtatcccctatggggcacgggtgtcggccccgccgaggctgggctttggtctgtcttgttctctctgggaggggtctggtgcgggtggaatacgtggagggagcctccgtggggggagcaactgctcccggtgttgcaaggaggacagagccaatgcccgccccatcgtgtcatggccgacggtggcctcagaagatgtgtccacgtccccagtcgctggaagctgtgcacgagctcttcctggagaaaaggcccttggcagatacaaggattttgagatgagctcgtcctggagtatctgtgtgggccctaaatgcaatgacaagtgtccctatacaggaaaggagaggagggacactggagagcagggggaggccacgtgaggttggaggccagcaggggttacacagccacaggccaaggagggccagagccaccagaagctgaaagagatgaggaagcaccttcccctggagccctcagggagcgcggccctgctgccaccttgatctcagacttctgtcctctgtaaccaagggaataaagtcctgctgtgtgaagcc
//
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@meso_cacase at
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