GGRNA Home | Help | Advanced search

2024-04-26 00:22:57, GGRNA : RefSeq release 60 (20130726)

LOCUS       NR_026966               5223 bp    RNA     linear   PRI 16-JUL-2013
DEFINITION  Homo sapiens uncharacterized LOC100130691 (LOC100130691),
            non-coding RNA.
ACCESSION   NR_026966 XM_001716191 XM_001716660 XM_001718897
VERSION     NR_026966.1  GI:224028253
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5223)
  AUTHORS   Venter,J.C., Adams,M.D., Myers,E.W., Li,P.W., Mural,R.J.,
            Sutton,G.G., Smith,H.O., Yandell,M., Evans,C.A., Holt,R.A.,
            Gocayne,J.D., Amanatides,P., Ballew,R.M., Huson,D.H., Wortman,J.R.,
            Zhang,Q., Kodira,C.D., Zheng,X.H., Chen,L., Skupski,M.,
            Subramanian,G., Thomas,P.D., Zhang,J., Gabor Miklos,G.L.,
            Nelson,C., Broder,S., Clark,A.G., Nadeau,J., McKusick,V.A.,
            Zinder,N., Levine,A.J., Roberts,R.J., Simon,M., Slayman,C.,
            Hunkapiller,M., Bolanos,R., Delcher,A., Dew,I., Fasulo,D.,
            Flanigan,M., Florea,L., Halpern,A., Hannenhalli,S., Kravitz,S.,
            Levy,S., Mobarry,C., Reinert,K., Remington,K., Abu-Threideh,J.,
            Beasley,E., Biddick,K., Bonazzi,V., Brandon,R., Cargill,M.,
            Chandramouliswaran,I., Charlab,R., Chaturvedi,K., Deng,Z., Di
            Francesco,V., Dunn,P., Eilbeck,K., Evangelista,C., Gabrielian,A.E.,
            Gan,W., Ge,W., Gong,F., Gu,Z., Guan,P., Heiman,T.J., Higgins,M.E.,
            Ji,R.R., Ke,Z., Ketchum,K.A., Lai,Z., Lei,Y., Li,Z., Li,J.,
            Liang,Y., Lin,X., Lu,F., Merkulov,G.V., Milshina,N., Moore,H.M.,
            Naik,A.K., Narayan,V.A., Neelam,B., Nusskern,D., Rusch,D.B.,
            Salzberg,S., Shao,W., Shue,B., Sun,J., Wang,Z., Wang,A., Wang,X.,
            Wang,J., Wei,M., Wides,R., Xiao,C., Yan,C., Yao,A., Ye,J., Zhan,M.,
            Zhang,W., Zhang,H., Zhao,Q., Zheng,L., Zhong,F., Zhong,W., Zhu,S.,
            Zhao,S., Gilbert,D., Baumhueter,S., Spier,G., Carter,C.,
            Cravchik,A., Woodage,T., Ali,F., An,H., Awe,A., Baldwin,D.,
            Baden,H., Barnstead,M., Barrow,I., Beeson,K., Busam,D., Carver,A.,
            Center,A., Cheng,M.L., Curry,L., Danaher,S., Davenport,L.,
            Desilets,R., Dietz,S., Dodson,K., Doup,L., Ferriera,S., Garg,N.,
            Gluecksmann,A., Hart,B., Haynes,J., Haynes,C., Heiner,C.,
            Hladun,S., Hostin,D., Houck,J., Howland,T., Ibegwam,C., Johnson,J.,
            Kalush,F., Kline,L., Koduru,S., Love,A., Mann,F., May,D.,
            McCawley,S., McIntosh,T., McMullen,I., Moy,M., Moy,L., Murphy,B.,
            Nelson,K., Pfannkoch,C., Pratts,E., Puri,V., Qureshi,H.,
            Reardon,M., Rodriguez,R., Rogers,Y.H., Romblad,D., Ruhfel,B.,
            Scott,R., Sitter,C., Smallwood,M., Stewart,E., Strong,R., Suh,E.,
            Thomas,R., Tint,N.N., Tse,S., Vech,C., Wang,G., Wetter,J.,
            Williams,S., Williams,M., Windsor,S., Winn-Deen,E., Wolfe,K.,
            Zaveri,J., Zaveri,K., Abril,J.F., Guigo,R., Campbell,M.J.,
            Sjolander,K.V., Karlak,B., Kejariwal,A., Mi,H., Lazareva,B.,
            Hatton,T., Narechania,A., Diemer,K., Muruganujan,A., Guo,N.,
            Sato,S., Bafna,V., Istrail,S., Lippert,R., Schwartz,R., Walenz,B.,
            Yooseph,S., Allen,D., Basu,A., Baxendale,J., Blick,L., Caminha,M.,
            Carnes-Stine,J., Caulk,P., Chiang,Y.H., Coyne,M., Dahlke,C.,
            Mays,A., Dombroski,M., Donnelly,M., Ely,D., Esparham,S., Fosler,C.,
            Gire,H., Glanowski,S., Glasser,K., Glodek,A., Gorokhov,M.,
            Graham,K., Gropman,B., Harris,M., Heil,J., Henderson,S., Hoover,J.,
            Jennings,D., Jordan,C., Jordan,J., Kasha,J., Kagan,L., Kraft,C.,
            Levitsky,A., Lewis,M., Liu,X., Lopez,J., Ma,D., Majoros,W.,
            McDaniel,J., Murphy,S., Newman,M., Nguyen,T., Nguyen,N., Nodell,M.,
            Pan,S., Peck,J., Peterson,M., Rowe,W., Sanders,R., Scott,J.,
            Simpson,M., Smith,T., Sprague,A., Stockwell,T., Turner,R.,
            Venter,E., Wang,M., Wen,M., Wu,D., Wu,M., Xia,A., Zandieh,A. and
            Zhu,X.
  TITLE     The sequence of the human genome
  JOURNAL   Science 291 (5507), 1304-1351 (2001)
   PUBMED   11181995
  REMARK    Erratum:[Science 2001 Jun 5;292(5523):1838]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK126517.1, AL833088.2, AC019080.6 and AC079305.6.
            On or before Feb 26, 2009 this sequence version replaced
            gi:169164812, gi:169164449, gi:169163506.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AL833088.2 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025084 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-4                 AK126517.1         1-4
            5-510               AL833088.2         2-507
            511-511             AC019080.6         43212-43212         c
            512-978             AL833088.2         509-975
            979-5194            AC079305.6         177621-181836       c
            5195-5223           AL833088.2         5179-5207
FEATURES             Location/Qualifiers
     source          1..5223
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2q31.2"
     gene            1..5223
                     /gene="LOC100130691"
                     /note="uncharacterized LOC100130691"
                     /db_xref="GeneID:100130691"
     misc_RNA        1..5223
                     /gene="LOC100130691"
                     /product="uncharacterized LOC100130691"
                     /db_xref="GeneID:100130691"
     exon            1..119
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            120..221
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            222..358
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            359..468
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            469..553
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            554..711
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            712..807
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            808..879
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     exon            880..5206
                     /gene="LOC100130691"
                     /inference="alignment:Splign:1.39.8"
     variation       4893
                     /gene="LOC100130691"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1135938"
ORIGIN      


agccaccgcggcgacttggcggcgggtgccatgcgtctggagcttcacattctctgccccccacccaccgcgccggcgctcccttgtcacgcctcgggaagcgcgcacctgccaagcaggatgaataatctgatatcatgtgaaatgaggaaataagaagctttctgctgacttcattttgacccagggtccaaaaggtgatgtaatcctgtggcaagaagattcaaaactgtggactatcttgcaaaaaatacaagaagatattgaaagttttcatgagtgcctaccacctaatctcaaacactatcattcatatgtgcctcattgagcaaatctttaatgaggatctatatgccagataatgtaggcattgttcctaagtcatgcagaggggttgtgtaagcatggtcatttgcatcattatcctgcacgtctgatacagccaaactccacgccacctggtttgctcaacagcaaaagacacggccgggtgcggtggctcacccctttaatcccagcactttggaaggccgaggcgggcggatcatttgagcaatatcttttgcttgggagcagaaacagaaagtacatgatggacttcattgaaggatggagatttggaagacatgaatggatgaagaaccaagtgcgtgagggcacctatcaggattattgctgaaatccttatggagttaactggctgagaggaagtagagatggggtttcaccatgttgcccaggctggtctcaaactcctgagctcaggccatctgcccgcctcggcctcccaaagtgctaggattacagaaggtgcctgcttccccttcaccttccaccatgattgtaagtttcctgaggcctccccagacatgtggaactaacaggtttctcttattgcctggatccaagagcatctcctgggttcttcctgttagaatactgaatgtccatggagagtttaacataaggaagaagaggcctgtctcccagctgaaactggtgcagcagatcatgcaaagtaaaacctcagcagctgtgatgaagtagagcagagggcctgggtgtctgtcagctccaagcggaagatttccccagctttctaggtaactgtgcttccactgagcaagccagacacagacttgaatgtcatcacaatctgtgcctgtgacatctttccccaagaatagcacaaattgaacttttacattcttcataatatggaaggaaaggtattgactgagccacttctttatgcctcaagacatctcatatgtatttatatggatacatacatgaatgtatatattctgtcataataacatattctatttttcttattatagcacagtgttaggataggctacataggctgcattaaaccctcaaatagaagtttatattatgcatcagaagccagtgcagggactctcctcagcacaacatctctaagtggtgacttggaggttcaggctcctttcatcttaaaatgccatcatcttcagcatttggcctcaacagttgccagagagggagaagagagtatgtataagaccacactgcaggatctgtgttaggtctgcaagcactgctgtcacctctgccaaatcccgttagccagaacccaatcatatggccccatcctaactgcaagggaagcctgggaaaggtcttcttgtatgccaggaaaagaaaatgaaatcgacaagtatctagccagtctttgctacaagtttctacatgttggaattattatctatatttttcttctgatcatgcttagcatttgatactatgtagactgccttgttgagtcctgctgtattttgtgacatccacatgcagcatcccattcctcacaacaggactaggagtggtcagaagttttatcacccactttatggacggaaaccctgagacccagagcagttacatggcttgtccaaagttacatagtactgttaacttaaaaacacaatttataaatttagacaaagaaagaggagactttatttcttataaagggttatagccttcaaagtggctatctcacaggctgggaagctcagccttcagcagaagcccagagacaagcattttgaaggcagaggggttgggatggagctttatgctgaacaggttgactaaatatacatattcaacaggttacaggaggagctatgaatattcatgagggtggtcctgacacatgcgtattgaacaaacatacatgtaacacatgacccatgttcactttgggatggagacttaacatttcaatgtattacagttaggccctacacatcaaaaggtcatttcaggacacaaaagctcacaagtacacaatctctgtaaactagtcagaaccagtccatggttggtggtcttatcaggaaaaagttactaaaattagtctctcatccaatgaaagctgtagttatggctggtggaacaggggttcagttgggcagagtctatgagcaggatgatttgcaattgtttaaatattgcttatcttgaggccagtgcttgtttagctgctggagaaaaagaaaatccttgtggcagttagagcatagtttcttccttaggtgtaggagtacatgacttcccctcacctggcatggccttaggtcctgtttataattcggtatcttattgccacaaagaatctgttctgtgagtcatgtgatctctattggaacattaatgctgctcagttgttgtgtctaaaccataaaagagaaggagagtataattaggcatgtctgacctctcatcatagctgggaactaagtctttaaatttttttctggggtcctcttggccacaagggggtccatttagtcagtgggggccttgggatttatttttagtttacattgctaagtgacagagctttgcttctttcactctgaggttagtggtctctctgctgtgccacattgtcttccccagaagctcaaactggatgcccagccctcagtgtacaaactcaagtatgcaagaaatacatctttattcttttatgaatatacctaatttatatgttggaaggtgtcagcaatgaatttgatcactttggtatttctctacctttaaagatatgtttacatttggggtgggatgaaggtttggtggaggggaaggtggtcaggttgggccaaggtattgggaaatccatttgttcctcatgtcagctgtttgaggaggcaccaacccagatgtccacagttccttctggccttcctttaccgatactgatgcacctgtgcctccttcctgtgtgcatggcccatttgtgcccagcatctccctgctattttggggccactccagggtctgggaagttctgtaggcttataacatacagtcattcttctccccagcttgctgcctccctgagacacagaggtagagaagtaggaaaggacctaccgtacccaggcctttgccctctcacttttcatccatccttcttcccaccagtggagggatgtgtttctagtcttccagggaagctcctctctcctcaaaccattttcttccaaatactttggctttattccaaatcctctctagtcctctgagatttttttataacacaaaacacaacttacagaagttgtgttgttgttttgctgtttatcttgtcacattatttctctaccttgaggcaacaggacaagggcctgctgtccagcgcacggaggcagggaggaaggggtaggggaatactaagaaaaaaaaatttctcgatcacatgtgtaccacatttaactttatcaggtccttgtgaggtgagtatctgtgtgtcattgttctgaaactaacagtgaggggacaaagcattgataggagttcttacaatatatttgggaactcgcaggtgagggcctctcctgcctgattggtctttcaatgtaccatcccaacccacccacctcaatccccatggcttgatcctgctgtctcggtgatcaagctttcagttaagaattgggtgataatgagctagttaatccaatttaaaaaaaaagaattaggatctgggctcagaagccccacagctgtgaaagcctggccgtagattactagtcttctagatgtagaaaagatttttcctttctctggctatttaagtctttatcagtcaccctgcctcagttatcaacacacaccctagagtaaatctgttccctgggggtggaaatagaaggggcatgtcattgtacatccacactgatgaaaggaaaggaaacattaagatggcttaagtggaaaggtcacatacggcttgtactagagagacaccatgctaaagcaaaacatcgtttaaaaaaattctgacttatcatgtgctcagaaatgctcaaatgggtacaaccatcaccaagggtgggatgggagggcaggggaaaaaaatatgaagcatcaaaaaaaattctgatttgtatttgtgaaattcaatagtaaccctattcattaactggattttaaaatcatttcaaagcacattcggctttcaaaagatgtttgtttaaataatacagttggcttttggtcaaaaaatgaagtttcggtaatgcatagtaacaactgtagtgtaattactggccacaaaataccaggtgccagaccaacccttttcgaaccatttaagagaaccaagccaagcaaaaatgcccagcctagccttacccagaagttcaaaagctcagcctttgtcaccaggaaaaaattaattcaaagagcaaagccattattcggcacaaccaggtattctgttgtaaacatcttttgttaatacatgttgaaagctgaactttctcacgtttgagtgaaagagggctgcttaaagagagtttaaaccaagccaggttcaaggtttttttcttttctttctttttagatttctgacttcatatctgtgggatccacacaatggggaggtactggccttggaatccatggttccccagctatcattttactttagaattacagtgttctctgttagtgtcaagggaatgaacctgacgagaaaagaccaaacataggactgttacagggaagaaaaatatgaaaagacctaaagatgcacgtcctcattatatgtaaggaatctatttcctagaatcctataaaaagctcaagtgaatttgcttcagttaataaatgtgatttaattataatgataatgccacagaaaaaaaaaaaaaaaaa
//

Annotations:



by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.