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2024-04-25 18:27:38, GGRNA : RefSeq release 60 (20130726)
LOCUS NR_024366 5802 bp RNA linear PRI 16-JUL-2013
DEFINITION Homo sapiens family with sequence similarity 225, member A
(non-protein coding) (FAM225A), non-coding RNA.
ACCESSION NR_024366 XM_001717200 XM_001717211 XM_001718432
VERSION NR_024366.1 GI:211938427
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5802)
AUTHORS Girard,A., Sachidanandam,R., Hannon,G.J. and Carmell,M.A.
TITLE A germline-specific class of small RNAs binds mammalian Piwi
proteins
JOURNAL Nature 442 (7099), 199-202 (2006)
PUBMED 16751776
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
BC130412.1, AL832752.1, AK127516.1 and AW590029.1.
On or before Nov 6, 2008 this sequence version replaced
gi:169177927, gi:169177929, gi:169181277.
##Evidence-Data-START##
Transcript exon combination :: AL832752.1, AK292424.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084, ERS025085 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-177 BC130412.1 1-177
178-2628 AL832752.1 1-2451
2629-5475 AK127516.1 1615-4461
5476-5802 AW590029.1 1-327 c
FEATURES Location/Qualifiers
source 1..5802
/organism="Homo sapiens"
/mol_type="transcribed RNA"
/db_xref="taxon:9606"
/chromosome="9"
/map="9q32"
gene 1..5802
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/note="family with sequence similarity 225, member A
(non-protein coding)"
/db_xref="GeneID:286333"
/db_xref="HGNC:27855"
misc_RNA 1..5802
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/product="family with sequence similarity 225, member A
(non-protein coding)"
/db_xref="GeneID:286333"
/db_xref="HGNC:27855"
exon 1..268
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/inference="alignment:Splign:1.39.8"
variation 3..20
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="gccaggagcagagagcaa"
/db_xref="dbSNP:11274536"
variation 3
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="g"
/replace="t"
/db_xref="dbSNP:62574458"
variation 5..9
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="cagga"
/db_xref="dbSNP:79562714"
variation 12
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="t"
/db_xref="dbSNP:62574459"
variation 14
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="agagcaagggacg"
/db_xref="dbSNP:78941353"
variation 137
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:62576060"
variation 209
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="c"
/db_xref="dbSNP:372123723"
exon 269..375
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/inference="alignment:Splign:1.39.8"
exon 376..5802
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/inference="alignment:Splign:1.39.8"
variation 451..452
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="gc"
/db_xref="dbSNP:201606800"
variation 1935
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="g"
/db_xref="dbSNP:71213356"
variation 2067
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="c"
/db_xref="dbSNP:201555857"
variation 2819
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:199701586"
variation 3296
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="a"
/db_xref="dbSNP:199895999"
variation 3296
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="g"
/db_xref="dbSNP:200263654"
variation 3722
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:201371110"
variation 3847..3861
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="cccattggtagaatt"
/db_xref="dbSNP:377441697"
variation 3869..3870
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="ccaatgggaattcta"
/db_xref="dbSNP:71302605"
variation 4155
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="g"
/db_xref="dbSNP:199579316"
variation 4155
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:4979212"
variation 4859
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="g"
/db_xref="dbSNP:41261144"
variation 5267
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="g"
/db_xref="dbSNP:141797074"
variation 5303
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:190518338"
variation 5340
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="g"
/replace="t"
/db_xref="dbSNP:12236936"
variation 5344
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="g"
/replace="t"
/db_xref="dbSNP:146237409"
variation 5384
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="a"
/replace="g"
/db_xref="dbSNP:41280205"
variation 5455
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="g"
/replace="t"
/db_xref="dbSNP:201393210"
variation 5694..5695
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace=""
/replace="t"
/db_xref="dbSNP:149861270"
variation 5736
/gene="FAM225A"
/gene_synonym="C9orf109; LINC00256A; NCRNA00256A"
/replace="c"
/replace="t"
/db_xref="dbSNP:7041987"
ORIGIN
cagccaggagcagagagcaagggacggagaatgtcagcgattccgggagagcccgcgagggggcgagcgaccaccgctcggccgcgagctcagcgcttccctcgccgcttcccaacggccagcagagggcgcgcgcctggcgctgagcccaaccgccgcctccaacgggactggaccagaccgggtgggaccggaccgcggtttgagtccaagcccagcggtgtttgcggcgggtccggggcctggaagcgcgggggcggcgccgagaacgaaactggaaaatggccttcattggaaaagccccagtcctcggggagcagatcccccatctctggcagtgcagtgtgcctgggagctgtctggaacattccgcaacggtcactcctctgccctgcattggccttgaccacatgacccagaggtgcagggagaagcctcccttggatgcttggagtgacttcagctgctgagagtgtctaaggagagccgggaacaccgcacgcttcctgcagatggcggggcagacctgtgtgcaagagtgcctgaaggggatctcccgtggcgctacctggtccagggaggtcacagagagctcctccaccctgagcacagggggtcccaccaaggacaaggacaagattcagcaccgtcgcacacagaacagctacctggagccacaggtcactttccaaaaagggagtttccaggccagaagccatccctgcagcattgtctttgtgctccaagagaagccctggcacacacttctgctcagatggaaccactgttccctcagtgtccttgtcagtaccagctggtgactttcctactcaaacccttccctcactctctgcctcattttctcaaggtgccgtgtttgcctgaaaggacattggcagccagcaggggcggcggctggtcctctagatgggcacgaatgccattggcaggcaatggggcagactccatggaaagatgcttctcttcctcaaggtatgcactcagcggggagacctcattgtcaagttcagagttacgctgcagactgcacagcacctcgcctgcttctagggcctgctccggtcagcccaggacccaccacagcaggaccccccatcctgtgctcacccggggcttgtccatggcactggaaactccttcctgttcctgatccccctctgggcgaggggtgggcagggacatgtggctcgtgccgaggtctaatactgtgttcccagcatggaagcaggtggggacacttcctgtggcatgcaggattccgtgtagaaagctgtgactgtcacccctcctccccactcagttttgttagtggacctttccctggcccttctctccttggccccctcttggcaggagagaggaggagaggatctcactttccccctgtaccagccacaccctcggtctgcggggttcccagcagctggccagggatgctccacacctggaggtcaagtaaccgtcccctcactctgggcatcggtgccctctctggggttggaacaggaaagaaagccaagacctgtatgtgggacttgagttgagactcaattctgtagagtcaggggtgaggaggagccaggcctcctgtgtgctctccataccccagagccgggtgcccagttccatgggtcctgatggacagaagggaagaacgggggggctgctgcaccgtgggtggtaatgcagtgggagccacctccagctgaatgcccagggactcctggggctgctggccccgggtcccagcagtgggtcctgtttcttctttactcttggaatgcaggatctgccacaccaaaacgtcccctccacatttggtgaaataggaagctccatggcatgtctccatctttcaaggtgactgagaggtttattttcataggagcctcagtggccttgtccgtacccacctctgcacgtggttgcagaaagtgaaggattgtcagggagcagggcagacatttggtttatctgtgtcattggtcaaagttttgtttttcctccagaagaaaaaggcttgtgaacatgccaccgtattcttcattccttcttttggaaatgtatgaagaacgggtggcattttggagttattggcctgtgaacagctggcccagaggaagggttagatgtgggtgggtgtggccgcctctgcccctccccagcgcaggtgtgcgtgggcagcccaggcaggcgctcaggaagggtgaggtggagccctgcacgctctgagcacaaagtcctgggatcccttaaacccaagcactgccttgacagcagccagcatggctgatagaagagacacagaagtccagctgatgccagacagagggcgtcactagagagccgtgctaggtgggggtcattcaagttgtcttggcgtatgcagacgttgcttctagagagtcagaagctctatatgcgtagtgttggagcagaatttcgggatagtgatggcaagcctcctcccaagccagctggggagtatggggagggggtggccggaggaacctggcatccccgggttaggaccacagaggtggctctgcctgcagctgggcctctgcctcatcctgactccccctgctttggccatggctcttcttgtccttcctcttctcagtgcaggaggaccctgaatcaaatgcctcatcctggtttgcattttaccctcggatgaagcttgtggcgaacccctggactctgtgtctcctgagtctctgcagacctcgggtcctggacccagagactcttctccctgggacaggaggcactggggtgggtggacaggggtggcctggggcacagtagctgacggggggacttcctagttttctgggcctttccaactctgagtgtgaccttcctattcttgatcacagcccccaacttcggagcctgctagagcctgcagaatgtggcttcatcctcttcctctgtgggaaaaggcggggcctggcagtcccgccaatcttgtatatttgctccccacctcggtggtgaatacattcttgggtggtgaataggttctctccttgccttcactctagaaaagtcccctgttttgtgatgtaggatgtggtcaatgactgactcgtccctttggaccatagacgcagctctgatttctggtgttcctgggctctgcacacagcaggagccactctgggctctgagaggtgcatcttctggctcactttcttcttgttggctcttctccctgcgtcttctgccactgccctgttctgggtgggaggctgtcacactgtggtggagggtcccctctcctgcctcccctctttgatccttttctgtgagggtctgctggggtcctgtgtgtcgtgcattgttgatagattcctgtcgtgcttgctgtcctccccattctaagggacctctgattgcctgtgagcagtttacagggtcctctcctggccccttcacccgaggaattcccgcaacgcatgagtttgtgaggggcggatcctgggaggatgtgacgtcaggtgagaagggagggcccgtcctagtccggtgggctcctctaacaaagtgcattagcctggggagttactgacgctcgaaatatgtcgtcaaagttctgaaggctgagaagtccgagatcaagatgcctgaggattcagtgcctggtgaggacccattccttagggcagtgcctctagctgtgtcctcatgtggccgaaggggacaagggaggttgctggagcctgtttgatgagagcactaccttccttcaggaggggattattcagaaagtctgtctggtttcagggcattcccaaaggccccacctgttcattctaccccattggtagaattcccattgggaattaggcttcaacatacaaatttgggagacactgacatttaggccatagcgcgtcaaaggcaaagtgaggctgagtgtggaaaccatcccagaatctggatgtggcccaggcagaaggaaactcaaagtgatggggtgaccgatggtccctggtctgtgcaggactcagcggtgcggatggccctgggcacggtggcagtggctgttggaggatgatagggaacatgttggtggggggagggtggagcccactatgagtggcaactccctgggggcacaggaaacaaagctagaggtggctcccctctcccctccctgcacacagtgtcacctctgtggtggccctgtcgtccgcctcagttcacaggtgttgctgtaacaactcctgaaattaccttcaaaaggaggctcgtgcaggtgcctgcaggagccaggaggccgaagtgcatcctgagtgtccggggacaggccagcctggcggggtccacggccccacagtcccaacgactgcctcagaaatgggcagagagcatgcctggttctagctggcaaggcccacatctcagagctgtggacagtcatgaagggtccgtgagcatggagagggggcaaaaatgacccatgaacctcaggccactgtgctgccatccagccaagtgcggtaccagcccttcgggcctcgagatcctctacccttctctgggccttgctgatttcctcctccagcccctctgtttgtgtacgcacatacacacatgcacgcacgcacacgcacacccagtgcaatttctctctgctccctgtactccccaaaattcaatgggttcctctttcctcctcagagatatagtcctgggccccatctcagcctgcagaggcctgaacgtttcccaggattgtcttctaattctcaggtccggctttaaaacaaaacctaaactaaaactaaaatgctttctgcaaagaataatacaccaacataaagtccgggtatcctaagcatgtggtgtgtatggtgtctgaaattgaatatgctgtgaaactgcctgtgtcgaaatgcagtgtttcccaagacctggaggctctctccagctgctgattgtgatcacctctcccgatcaccgctgagccctgcaggtcaccttctcctgacctattacaccactgattgcttatgctgggcacaattttatacccttgctgttgttcagtctaatcatccctataaccctatcggatcattcccatatgacagaggagaaaacctggggacacaggggctgtgtcctggccaaggccttgcttgcagcaaaaggcagagctggggtctagccaggagccccagcacagtcctgttcttcccccactaaactgagctgtgaaatagatcatggcggtctggaaaacgagctaattccgtgccgatggaggtgttgatggatgtccaccactctccacttgggaggaggccttaacatccccctcaggtctagcttctctctgtgactgagtaccttgggaaagtgggctcagaggaggaaagggacttacttgcccaagggccacagctgccaagtggcaggtaagggaccgttattctcctgtccctttcacagaggacaggaggaaagtgaggacaggtggggtacatgagtttagcctcttttctgcagcaggcccagatcagctttgcacacggttggtgctgacctcaaatgcagccctagaggggcctatctctgccctgagtattgaggtgcaggcttcttcccctttgttctgtccatttccaaaaatgtgaacacacacctcctacatgtttatattattgtgtgcatagatactaccattgtaacattttttgcggattaaaaatgcactattgtattgaaaatttcaaaggaaatgtgtaataaaacatttaaaattaa
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