LOCUS       NR_002222               1215 bp    RNA     linear   PRI 16-JUL-2013
DEFINITION  Homo sapiens arginine-fifty homeobox pseudogene 2 (ARGFXP2),
            non-coding RNA.
ACCESSION   NR_002222
VERSION     NR_002222.1  GI:60593083
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1215)
  AUTHORS   Booth,H.A. and Holland,P.W.
  TITLE     Annotation, nomenclature and evolution of four novel homeobox genes
            expressed in the human germ line
  JOURNAL   Gene 387 (1-2), 7-14 (2007)
   PUBMED   17005330
COMMENT     PROVISIONAL REFSEQ: This record is based on preliminary annotation
            provided by NCBI staff in collaboration with Anne Booth and Peter
            Holland. The reference sequence was derived from AC116407.18.
            
            Summary: Homeobox genes encode DNA-binding proteins, many of which
            are thought to be involved in early embryonic development. Homeobox
            genes encode a DNA-binding domain of 60 to 63 amino acids referred
            to as the homeodomain. This pseudogene is a member of the ARGFX
            homeobox gene family. [provided by RefSeq, Jul 2008].
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1215              AC116407.18        52649-53863
FEATURES             Location/Qualifiers
     source          1..1215
                     /organism="Homo sapiens"
                     /mol_type="transcribed RNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q11.2"
     gene            1..1215
                     /gene="ARGFXP2"
                     /note="arginine-fifty homeobox pseudogene 2"
                     /pseudo
                     /db_xref="GeneID:503640"
                     /db_xref="HGNC:23977"
     misc_RNA        1..1215
                     /gene="ARGFXP2"
                     /product="arginine-fifty homeobox pseudogene 2"
                     /pseudo
                     /db_xref="GeneID:503640"
                     /db_xref="HGNC:23977"
     exon            1..1215
                     /gene="ARGFXP2"
                     /inference="alignment:Splign:1.39.8"
                     /pseudo
     variation       complement(16)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:73284189"
     variation       complement(17)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:189128880"
     variation       complement(41)
                     /gene="ARGFXP2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143977154"
     variation       complement(47)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138405190"
     variation       complement(80)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369123393"
     variation       complement(206)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141416392"
     variation       complement(307)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:148288330"
     variation       complement(384)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143231596"
     variation       complement(386)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:368034723"
     variation       complement(412)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:73989708"
     variation       complement(413)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140452408"
     variation       complement(492)
                     /gene="ARGFXP2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:114164052"
     variation       complement(501)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373565814"
     variation       complement(588..589)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="agc"
                     /db_xref="dbSNP:71144809"
     variation       complement(589..590)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="gca"
                     /db_xref="dbSNP:34323066"
     variation       complement(611..612)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="agc"
                     /db_xref="dbSNP:150449021"
     variation       complement(612..613)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="agc"
                     /db_xref="dbSNP:112682767"
     variation       complement(666)
                     /gene="ARGFXP2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:181804010"
     variation       complement(698)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:73284185"
     variation       complement(727)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:9906736"
     variation       complement(746)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:12940465"
     variation       complement(751)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146748999"
     variation       complement(910)
                     /gene="ARGFXP2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:73989707"
     variation       complement(1116..1117)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:71360802"
     variation       complement(1131..1132)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:35327661"
     variation       complement(1140)
                     /gene="ARGFXP2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:56132283"
     variation       complement(1215)
                     /gene="ARGFXP2"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:376067936"
ORIGIN      

agagagagacacaccgcgcaggactgaaaatggtctaaggggattcatgacagatttcagaaaccatgatgaacagaatggccccagagaatccctagctagactctttcatcaacaggaatgattccaacatgaaggtgataccaccacaggatccagctagtcccagtttcactctgtcatccaaactggagtgcagtggtgcagtcttggctcactgcagcctcaacctcccaggttcaagtgatcctcccaccttagcctcccaagtatctgggactacagcaatatggagaaggcatcaagaatgtacttcattcacccgccaacagtataaagaactagaagctctgtttagccagaccatgttcccagacagaaatcttcaggagaaactagctttgaaactcaacctaccagagtcaacagtaaagaacccagtgtcatggtaaattggagaggatgtgagatgataacctggctgttttcactcaggagaagcctggaatgccttctccaagaacagaccacaatctcccctcttcccccactcccaggtttggtttaggaaccggcgattcaaattgaagcagcagcagcagcagcagcagcaatcagcaaagcaaccaaaccagataccttccatccaagaagaatgtgcccacctcccccagaacatcccccagtgcttatgctttttctcccgtggtttcagatttctacagctcccttccacctcagctcttagacccttccaattgggcatggaactctaccttcactgagagtcccacaagtgacttccaaatgcaagatactcagtgggagaggctggtggcctcagttcctgctttgtactctgatgcctatgacatatcccaaatcatagaactgtataatcttcctgatgagaatgagatatccagctcttctttccactgtctgtatcagtatctctcactcacaaagtaccaggtaggaggacagggttcctctctcagcacctttgctggtctagctgtaggcctatctcccacacaaacctggcccagtatgataaggcaaggctttaaagactacagtctaacagacagcctggaattccagaaaacctccaatatggtagactttggatttctctgactagagtactaataaatatggaccatttagaaaagaggtcttcttgcatcttacacatgaaaaaaaaaaaaa

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