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2024-04-19 01:34:57, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_182658 1454 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens BPI fold containing family B, member 3 (BPIFB3), mRNA.
ACCESSION NM_182658
VERSION NM_182658.1 GI:32964822
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1454)
AUTHORS Bingle,C.D., Seal,R.L. and Craven,C.J.
TITLE Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a
subfamily of the BPI fold-containing superfamily
JOURNAL Biochem. Soc. Trans. 39 (4), 977-983 (2011)
PUBMED 21787333
REFERENCE 2 (bases 1 to 1454)
AUTHORS Davila,S., Froeling,F.E., Tan,A., Bonnard,C., Boland,G.J.,
Snippe,H., Hibberd,M.L. and Seielstad,M.
TITLE New genetic associations detected in a host response study to
hepatitis B vaccine
JOURNAL Genes Immun. 11 (3), 232-238 (2010)
PUBMED 20237496
REMARK GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 3 (bases 1 to 1454)
AUTHORS Andrault,J.B., Gaillard,I., Giorgi,D. and Rouquier,S.
TITLE Expansion of the BPI family by duplication on human chromosome 20:
characterization of the RY gene cluster in 20q11.21 encoding
olfactory transporters/antimicrobial-like peptides
JOURNAL Genomics 82 (2), 172-184 (2003)
PUBMED 12837268
REFERENCE 4 (bases 1 to 1454)
AUTHORS Bingle,C.D. and Craven,C.J.
TITLE PLUNC: a novel family of candidate host defence proteins expressed
in the upper airways and nasopharynx
JOURNAL Hum. Mol. Genet. 11 (8), 937-943 (2002)
PUBMED 11971875
REFERENCE 5 (bases 1 to 1454)
AUTHORS Deloukas,P., Matthews,L.H., Ashurst,J., Burton,J., Gilbert,J.G.,
Jones,M., Stavrides,G., Almeida,J.P., Babbage,A.K., Bagguley,C.L.,
Bailey,J., Barlow,K.F., Bates,K.N., Beard,L.M., Beare,D.M.,
Beasley,O.P., Bird,C.P., Blakey,S.E., Bridgeman,A.M., Brown,A.J.,
Buck,D., Burrill,W., Butler,A.P., Carder,C., Carter,N.P.,
Chapman,J.C., Clamp,M., Clark,G., Clark,L.N., Clark,S.Y.,
Clee,C.M., Clegg,S., Cobley,V.E., Collier,R.E., Connor,R.,
Corby,N.R., Coulson,A., Coville,G.J., Deadman,R., Dhami,P.,
Dunn,M., Ellington,A.G., Frankland,J.A., Fraser,A., French,L.,
Garner,P., Grafham,D.V., Griffiths,C., Griffiths,M.N., Gwilliam,R.,
Hall,R.E., Hammond,S., Harley,J.L., Heath,P.D., Ho,S., Holden,J.L.,
Howden,P.J., Huckle,E., Hunt,A.R., Hunt,S.E., Jekosch,K.,
Johnson,C.M., Johnson,D., Kay,M.P., Kimberley,A.M., King,A.,
Knights,A., Laird,G.K., Lawlor,S., Lehvaslaiho,M.H., Leversha,M.,
Lloyd,C., Lloyd,D.M., Lovell,J.D., Marsh,V.L., Martin,S.L.,
McConnachie,L.J., McLay,K., McMurray,A.A., Milne,S., Mistry,D.,
Moore,M.J., Mullikin,J.C., Nickerson,T., Oliver,K., Parker,A.,
Patel,R., Pearce,T.A., Peck,A.I., Phillimore,B.J.,
Prathalingam,S.R., Plumb,R.W., Ramsay,H., Rice,C.M., Ross,M.T.,
Scott,C.E., Sehra,H.K., Shownkeen,R., Sims,S., Skuce,C.D.,
Smith,M.L., Soderlund,C., Steward,C.A., Sulston,J.E., Swann,M.,
Sycamore,N., Taylor,R., Tee,L., Thomas,D.W., Thorpe,A., Tracey,A.,
Tromans,A.C., Vaudin,M., Wall,M., Wallis,J.M., Whitehead,S.L.,
Whittaker,P., Willey,D.L., Williams,L., Williams,S.A., Wilming,L.,
Wray,P.W., Hubbard,T., Durbin,R.M., Bentley,D.R., Beck,S. and
Rogers,J.
TITLE The DNA sequence and comparative analysis of human chromosome 20
JOURNAL Nature 414 (6866), 865-871 (2001)
PUBMED 11780052
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from AF549189.1.
##Evidence-Data-START##
Transcript exon combination :: AF549189.1, BC113398.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025085 [ECO:0000350]
##Evidence-Data-END##
FEATURES Location/Qualifiers
source 1..1454
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="20"
/map="20q11.21"
gene 1..1454
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="BPI fold containing family B, member 3"
/db_xref="GeneID:359710"
/db_xref="HGNC:16178"
/db_xref="HPRD:16644"
CDS 1..1431
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="long palate, lung and nasal epithelium carcinoma
associated 3; long palate, lung and nasal epithelium
carcinoma-associated protein 3; ligand-binding protein
RYA3; BPI fold-containing family B member 3"
/codon_start=1
/product="BPI fold-containing family B member 3 precursor"
/protein_id="NP_872599.1"
/db_xref="GI:32964823"
/db_xref="CCDS:CCDS13212.1"
/db_xref="GeneID:359710"
/db_xref="HGNC:16178"
/db_xref="HPRD:16644"
/translation="
MQPVMLALWSLLLLWGLATPCQELLETVGTLARIDKDELGKAIQNSLVGEPILQNVLGSVTAVNRGLLGSGGLLGGGGLLGHGGVFGVVEELSGLKIEELTLPKVLLKLLPGFGVQLSLHTKVGMHCSGPLGGLLQLAAEVNVTSRVALAVSSRGTPILILKRCSTLLGHISLFSGLLPTPLFGVVEQMLFKVLPGLLCPVVDSVLGVVNELLGAVLGLVSLGALGSVEFSLATLPLISNQYIELDINPIVKSVAGDIIDFPKSRAPAKVPPKKDHTSQVMVPLYLFNTTFGLLQTNGALDMDITPELVPSDVPLTTTDLAALLPEALGKLPLHQQLLLFLRVREAPTVTLHNKKALVSLPANIHVLFYVPKGTPESLFELNSVMTVRAQLAPSATKLHISLSLERLSVKVASSFTHAFDGSRLEEWLSHVVGAVYAPKLNVALDVGIPLPKVLNINFSNSVLEIVENAVVLTVAS
"
sig_peptide 1..60
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
mat_peptide 61..1428
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/product="BPI fold-containing family B member 3"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (P59826.2)"
misc_feature 85..756
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="BPI/LBP/CETP domain; Bactericidal
permeability-increasing protein (BPI) /
Lipopolysaccharide-binding protein (LBP) / Cholesteryl
ester transfer protein (CETP) domain; binds to and
neutralizes lipopolysaccharides from the outer membrane of
Gram-negative...; Region: BPI; cl00188"
/db_xref="CDD:206887"
misc_feature 85..105
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="BPI dimerizatation interface [polypeptide binding];
other site"
/db_xref="CDD:29339"
misc_feature order(100..102,115..117,124..126,136..138,145..147,
328..330,439..441,445..447,475..477,604..606,616..618,
628..630,727..729)
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="apolar binding pocket; other site"
/db_xref="CDD:29339"
misc_feature 826..1422
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="BPI/LBP/CETP domain; Bactericidal
permeability-increasing protein (BPI) /
Lipopolysaccharide-binding protein (LBP) / Cholesteryl
ester transfer protein (CETP) domain; binds to and
neutralizes lipopolysaccharides from the outer membrane of
Gram-negative...; Region: BPI; cl00188"
/db_xref="CDD:206887"
misc_feature order(859..861,868..870,880..882,889..891,1066..1068,
1165..1167,1171..1173,1198..1200,1306..1308,1318..1320,
1330..1332,1408..1410)
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/note="apolar binding pocket; other site"
/db_xref="CDD:29339"
exon 1..124
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 13
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:202172895"
variation 14
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="t"
/db_xref="dbSNP:138045241"
variation 30
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:375833464"
variation 62
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:369950926"
variation 81
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:149497264"
variation 93
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:144150108"
variation 94
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:138919082"
variation 108
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:147346398"
variation 110
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="t"
/db_xref="dbSNP:368960556"
exon 125..281
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 143
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201501868"
variation 176
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:112217883"
variation 177
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:150528981"
variation 178
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:138897849"
variation 187
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:150025342"
variation 196
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:145431597"
variation 213
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:35539872"
variation 237
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:143621529"
variation 262
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:202072797"
variation 267
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:146783248"
variation 274
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:368603025"
exon 282..386
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 304
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:371677418"
variation 361
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:140480951"
variation 366
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:143710366"
variation 374
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:73123554"
exon 387..527
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 405
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:150139646"
variation 412
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:138957506"
variation 415
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199504781"
variation 417
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:35242985"
variation 421
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:147000729"
variation 435
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:371950669"
variation 436
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:137930923"
variation 463
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:376567897"
variation 464
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:370279306"
variation 488
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:199515506"
variation 497
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:149445561"
exon 528..591
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 529
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:187451498"
variation 543
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:34032795"
variation 556
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:148635670"
variation 581
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="t"
/db_xref="dbSNP:147720727"
variation 585
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:201726387"
exon 592..652
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 596
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:146116881"
variation 600
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:140200538"
variation 643
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:143918747"
exon 653..744
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 682
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:4911290"
variation 705
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:117989719"
variation 738
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:149980236"
exon 745..924
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 751
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:142043656"
variation 780
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:143149440"
variation 786
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:147827868"
variation 793
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:376328599"
variation 811
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:201111989"
variation 850
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:200771603"
variation 863
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:375933547"
variation 869
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:2093066"
variation 870
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:17124073"
variation 891
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:147358664"
variation 892
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200354205"
variation 894
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:199598368"
variation 895
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200406115"
variation 901
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:139513207"
variation 914
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:141651092"
exon 925..978
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 933
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:150087753"
variation 942
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:370006680"
variation 945
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:138544042"
variation 950
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:202121541"
variation 961
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:372453694"
exon 979..1149
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 982
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:113939875"
variation 983
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:149267742"
variation 1002
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:6057717"
variation 1024
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:199722228"
variation 1032
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368197516"
variation 1036
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:140130224"
variation 1043
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:372397063"
variation 1044
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:369843384"
variation 1060
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:142099629"
variation 1067
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:201582304"
variation 1089
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:369561547"
variation 1106
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:6059063"
exon 1150..1217
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 1154
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:76298021"
variation 1181
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:79150816"
variation 1182
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:368164662"
variation 1183
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:375472654"
variation 1192
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:369835006"
variation 1200
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:142822628"
variation 1208
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="c"
/db_xref="dbSNP:151032238"
variation 1217
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:372182848"
exon 1218..1260
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 1234
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:144741997"
variation 1242
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:374762335"
variation 1257
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:116723328"
variation 1260
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:141344367"
exon 1261..1324
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 1268
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:147653729"
variation 1273
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:149106895"
variation 1278
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:45499201"
variation 1292
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:371368870"
variation 1303
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:73262178"
exon 1325..1401
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 1327
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="g"
/replace="t"
/db_xref="dbSNP:140066843"
variation 1332
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:145354732"
variation 1345
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:378098"
variation 1347
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:375331770"
variation 1370
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:200749582"
variation 1395
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:201462422"
variation 1396
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:376787900"
exon 1402..1454
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/inference="alignment:Splign:1.39.8"
variation 1419
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="t"
/db_xref="dbSNP:114341725"
variation 1420
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="a"
/replace="g"
/db_xref="dbSNP:149644176"
variation 1438
/gene="BPIFB3"
/gene_synonym="C20orf185; dJ726C3.4; LPLUNC3; RYA3"
/replace="c"
/replace="g"
/db_xref="dbSNP:199827585"
ORIGIN
atgcagccagtcatgctggccctgtggtccctgcttctgctctggggcctggcgactccatgccaggagctgctagagacggtgggcacgctcgctcggattgacaaggatgaactcggcaaagccatccagaactcactggttggggagcccattctgcagaatgtgctgggatcggtcacagctgtgaaccggggcctcttgggctcaggagggctgcttggaggaggcggcttgctgggccacggaggggtttttggcgttgtcgaggagctctctggtctgaagattgaggagctcacgctgccaaaggtgttgctgaagctgctgccgggatttggggtgcagctgagcctgcacaccaaagtgggcatgcattgctccggcccccttggtggccttctgcagctggctgcggaggtgaacgtgacatcgcgggtggcgctggccgtgagctcaaggggcacacccatccttatcctcaagcgctgcagcacgctcctgggccacatcagcctgttctcagggctgctgcccacaccactctttggggtcgtggaacagatgctcttcaaggtgcttccgggactgctgtgccccgtggtggacagtgtgctgggtgtggtgaatgagctcctgggggctgtgctgggcctggtgtcccttggggctcttgggtccgtggaattctctctggccacattgcctctcatctccaaccagtacatagaactggacatcaaccctatcgtgaagagtgtagctggtgatatcattgacttccccaagtcccgtgccccagccaaggtgccccccaagaaggaccacacatcccaggtgatggtgccactgtacctcttcaacaccacgtttggactcctgcagaccaacggcgccctcgacatggacatcacccctgagctggttcccagcgatgtcccactgacaactacagacctggcagctttgctccctgaggccctggggaagctgcccctgcaccagcaactcctactgttcctgcgggtgagggaagctcccacggtcacactccacaacaagaaggccttggtctccctcccagccaacatccatgtgctgttctatgtccctaaggggacccctgaatccctctttgagctgaactccgtcatgactgtgcgtgcccagctggctccctcggctaccaagctgcacatctccctgtccctggaacggctcagtgtcaaggtggcctcctcctttacccatgcctttgacggatcgcgtttagaagaatggctcagccatgtggtcggggcagtgtatgcaccaaagcttaacgtggccctggatgttggaattcccctgcctaaggttcttaatatcaatttttccaattcagttctggagatcgtagagaatgctgttgtgctgaccgtggcatcctgaggctgagacatggccaccagcct
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:359710 -> Molecular function: GO:0008289 [lipid binding] evidence: IEA
GeneID:359710 -> Biological process: GO:0045087 [innate immune response] evidence: NAS
GeneID:359710 -> Cellular component: GO:0005576 [extracellular region] evidence: IEA
GeneID:359710 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
by
@meso_cacase at
DBCLS
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