2024-03-28 19:35:51, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_153236 1242 bp mRNA linear PRI 07-JUL-2013 DEFINITION Homo sapiens GTPase, IMAP family member 7 (GIMAP7), mRNA. ACCESSION NM_153236 VERSION NM_153236.3 GI:55774985 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1242) AUTHORS Davila,S., Froeling,F.E., Tan,A., Bonnard,C., Boland,G.J., Snippe,H., Hibberd,M.L. and Seielstad,M. TITLE New genetic associations detected in a host response study to hepatitis B vaccine JOURNAL Genes Immun. 11 (3), 232-238 (2010) PUBMED 20237496 REMARK GeneRIF: Observational study of gene-disease association. (HuGE Navigator) REFERENCE 2 (bases 1 to 1242) AUTHORS Krucken,J., Schroetel,R.M., Muller,I.U., Saidani,N., Marinovski,P., Benten,W.P., Stamm,O. and Wunderlich,F. TITLE Comparative analysis of the human gimap gene cluster encoding a novel GTPase family JOURNAL Gene 341, 291-304 (2004) PUBMED 15474311 REFERENCE 3 (bases 1 to 1242) AUTHORS Cambot,M., Aresta,S., Kahn-Perles,B., de Gunzburg,J. and Romeo,P.H. TITLE Human immune associated nucleotide 1: a member of a new guanosine triphosphatase family expressed in resting T and B cells JOURNAL Blood 99 (9), 3293-3301 (2002) PUBMED 11964296 REFERENCE 4 (bases 1 to 1242) AUTHORS Stamm,O., Krucken,J., Schmitt-Wrede,H.P., Benten,W.P. and Wunderlich,F. TITLE Human ortholog to mouse gene imap38 encoding an ER-localizable G-protein belongs to a gene family clustered on chromosome 7q32-36 JOURNAL Gene 282 (1-2), 159-167 (2002) PUBMED 11814688 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BX440511.2, BC027613.1 and AA854865.1. On Nov 16, 2004 this sequence version replaced gi:28416944. Summary: This gene encodes a protein belonging to the GTP-binding superfamily and to the immuno-associated nucleotide (IAN) subfamily of nucleotide-binding proteins. In humans, the IAN subfamily genes are located in a cluster at 7q36.1. [provided by RefSeq, Jul 2008]. ##Evidence-Data-START## Transcript exon combination :: BC027613.1, BM925877.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025081, ERS025082 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-19 BX440511.2 28-46 20-1209 BC027613.1 9-1198 1210-1242 AA854865.1 1-33 c FEATURES Location/Qualifiers source 1..1242 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="7" /map="7q36.1" gene 1..1242 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="GTPase, IMAP family member 7" /db_xref="GeneID:168537" /db_xref="HGNC:22404" /db_xref="HPRD:17039" exon 1..89 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /inference="alignment:Splign:1.39.8" variation 18 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:188197773" variation 74 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:7810752" exon 90..1229 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /inference="alignment:Splign:1.39.8" variation 99 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:148683928" misc_feature 104..106 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="upstream in-frame stop codon" variation 124 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:374256990" CDS 131..1033 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="immune associated nucleotide; IAN-7; immunity-associated nucleotide 7 protein" /codon_start=1 /product="GTPase IMAP family member 7" /protein_id="NP_694968.1" /db_xref="GI:23397516" /db_xref="CCDS:CCDS5903.1" /db_xref="GeneID:168537" /db_xref="HGNC:22404" /db_xref="HPRD:17039" /translation="
MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELVELIEKMVQCNEGAYFSDDIYKDTEERLKQREEVLRKIYTDQLNEEIKLVEEDKHKSEEEKEKEIKLLKLKYDEKIKNIREEAERNIFKDVFNRIWKMLSEIWHRFLSKCKFYSS
" misc_feature 155..763 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="AvrRpt2-Induced Gene 1 (AIG1); Region: AIG1; cd01852" /db_xref="CDD:206651" misc_feature 173..196 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="G1 box; other site" /db_xref="CDD:206651" misc_feature order(182..199,236..238,527..529,533..535,635..637, 644..646) /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206651" misc_feature 257..280 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="Switch I region; other site" /db_xref="CDD:206651" misc_feature 260..262 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="G2 box; other site" /db_xref="CDD:206651" misc_feature 317..328 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="G3 box; other site" /db_xref="CDD:206651" misc_feature order(323..331,359..412) /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="Switch II region; other site" /db_xref="CDD:206651" misc_feature 437..439 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /experiment="experimental evidence, no additional details recorded" /note="Important for catalytic activity; propagated from UniProtKB/Swiss-Prot (Q8NHV1.1); other site" misc_feature 524..535 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="G4 box; other site" /db_xref="CDD:206651" misc_feature 611..619 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /note="G5 box; other site" /db_xref="CDD:206651" variation 149 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:368210582" variation 150 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:145339506" variation 157 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:7800829" variation 163 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:142236871" variation 172 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:199907558" variation 180 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:142322540" variation 195 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:372010180" variation 204 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:201064674" variation 205 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:114459899" variation 218 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:114367962" variation 267 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:147029703" variation 283 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:138301747" variation 285 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:367811003" variation 311 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:116726339" variation 316 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:3735081" variation 377 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:3735080" variation 386 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:368679926" variation 403 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="c" /db_xref="dbSNP:3735079" variation 406 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:200412468" variation 419 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:149518773" variation 437 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:115726102" variation 449 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:374792037" variation 463 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:144054418" variation 464 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:138568397" variation 487 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:369222429" variation 509 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:115164158" variation 525 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:141641243" variation 527 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:201058399" variation 532 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:373463019" variation 585 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:146170876" variation 590 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="c" /db_xref="dbSNP:116511786" variation 651 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:80028286" variation 659 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:144503420" variation 685 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:76457138" variation 686 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:76852482" variation 695 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:112604586" variation 705 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:375290251" variation 718 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:76395091" variation 719 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:200815148" variation 758 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:144859592" variation 766 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:115665615" variation 799 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:139866141" variation 803 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:114268593" variation 804 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:199951983" variation 841 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:369621530" variation 857 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:140912375" variation 875 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:370140657" variation 929 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:199668924" variation 939 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="g" /db_xref="dbSNP:372605250" variation 953 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:201757172" variation 976 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:373189465" variation 985 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:145825444" variation 999 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:141602988" variation 1004 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:377715710" variation 1009 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:370818881" variation 1038 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:150236188" variation 1039 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="g" /replace="t" /db_xref="dbSNP:373233332" variation 1070 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:10578" variation 1076..1079 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="tagt" /db_xref="dbSNP:141933762" variation 1079..1082 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="ttag" /db_xref="dbSNP:77097159" variation 1079 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:201633257" variation 1167 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:61244541" variation 1169..1170 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="atatatat" /db_xref="dbSNP:142032527" variation 1170..1171 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="at" /db_xref="dbSNP:71715597" variation 1177..1178 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="ta" /db_xref="dbSNP:71681162" variation 1185..1186 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="atatatac" /db_xref="dbSNP:369111955" variation 1185 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="c" /replace="t" /db_xref="dbSNP:73726888" variation 1186..1187 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="" /replace="ta" /replace="tatatata" /db_xref="dbSNP:60687169" variation 1194 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="t" /db_xref="dbSNP:138903749" variation 1205 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /replace="a" /replace="g" /db_xref="dbSNP:58391005" polyA_signal 1207..1212 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" polyA_site 1229 /gene="GIMAP7" /gene_synonym="hIAN7; IAN7" /experiment="experimental evidence, no additional details recorded" ORIGIN
agacacttttaactcacagtaaaagcaaaagcaacagctcaagcagcctccttggagaaaacctgaaaattcaacttgttcaagagaaggtcttgtacgtgcctaagttctagagcctcctgacgtgagcatggctgagagtgaggaccgctccctgaggatcgttctggtagggaaaactggaagtgggaaaagtgcaacagcgaacaccatccttggagaggaaatctttgattctagaattgctgcccaagctgttaccaagaactgtcaaaaagcatcccgggaatggcaggggagagaccttcttgttgtagacactccagggctctttgacaccaaggagagcctggacaccacctgcaaggaaatcagccgctgcatcatctcctcctgcccagggccccatgctattgtcctagttctgctgctgggccgctacacagaggaggagcagaaaaccgttgcattgatcaaggctgtctttgggaagtcagccatgaagcacatggtcatcttgttcactcgcaaagaagagttggagggccagagcttccatgacttcatagcagatgcggatgtgggcctaaaaagcatcgtcaaggagtgcgggaaccgctgctgtgcctttagcaacagcaagaaaaccagtaaggcagagaaggaaagtcaagtgcaggagttggtggagctgatagagaaaatggtgcagtgcaacgaaggggcttacttttctgatgacatatacaaggacacagaggaaaggctgaaacaacgggaagaggttttgaggaaaatctacactgaccaattaaatgaagaaattaaactagtagaagaggataagcataaatcagaggaagaaaaggagaaagaaattaaattactaaaattaaaatatgatgaaaaaataaaaaatataagggaagaagctgagagaaatatatttaaagatgtttttaataggatttggaagatgctttcagaaatatggcataggtttttgtcgaaatgtaagttttattcttcctaatttactgtgatttgttaatggatgaattgtattttgcaaagatagttagagaaatacctccttccccttagctttattaaggtatcattgataaataaaaataaaatatgtttaatgtatataatgtgatttttaaatatatatatatatatacacacattgtgaaataatgaaataaaggtaattaacacatctaaaaaaaaaaaaaa
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ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:168537 -> Molecular function: GO:0003924 [GTPase activity] evidence: IDA GeneID:168537 -> Molecular function: GO:0005515 [protein binding] evidence: IPI GeneID:168537 -> Molecular function: GO:0005525 [GTP binding] evidence: IDA GeneID:168537 -> Molecular function: GO:0042803 [protein homodimerization activity] evidence: IPI GeneID:168537 -> Biological process: GO:0006184 [GTP catabolic process] evidence: IDA GeneID:168537 -> Cellular component: GO:0005811 [lipid particle] evidence: IDA
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