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2019-03-23 03:47:53, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_152447               3747 bp    mRNA    linear   PRI 15-JUN-2013
DEFINITION  Homo sapiens leucine rich repeat and fibronectin type III domain
            containing 5 (LRFN5), mRNA.
ACCESSION   NM_152447
VERSION     NM_152447.3  GI:194733750
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Avery,C.L., Sitlani,C.M., Arking,D.E., Arnett,D.K., Bis,J.C.,
            Boerwinkle,E., Buckley,B.M., Ida Chen,Y.D., de Craen,A.J.,
            Eijgelsheim,M., Enquobahrie,D., Evans,D.S., Ford,I., Garcia,M.E.,
            Gudnason,V., Harris,T.B., Heckbert,S.R., Hochner,H., Hofman,A.,
            Hsueh,W.C., Isaacs,A., Jukema,J.W., Knekt,P., Kors,J.A.,
            Krijthe,B.P., Kristiansson,K., Laaksonen,M., Liu,Y., Li,X.,
            Macfarlane,P.W., Newton-Cheh,C., Nieminen,M.S., Oostra,B.A.,
            Peloso,G.M., Porthan,K., Rice,K., Rivadeneira,F.F., Rotter,J.I.,
            Salomaa,V., Sattar,N., Siscovick,D.S., Slagboom,P.E., Smith,A.V.,
            Sotoodehnia,N., Stott,D.J., Stricker,B.H., Sturmer,T., Trompet,S.,
            Uitterlinden,A.G., van Duijn,C., Westendorp,R.G., Witteman,J.C.,
            Whitsel,E.A. and Psaty,B.M.
  TITLE     Drug-gene interactions and the search for missing heritability: a
            cross-sectional pharmacogenomics study of the QT interval
  JOURNAL   Pharmacogenomics J. (2013) In press
   PUBMED   23459443
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Oudot-Mellakh,T., Cohen,W., Germain,M., Saut,N., Kallel,C.,
            Zelenika,D., Lathrop,M., Tregouet,D.A. and Morange,P.E.
  TITLE     Genome wide association study for plasma levels of natural
            anticoagulant inhibitors and protein C anticoagulant pathway: the
            MARTHA project
  JOURNAL   Br. J. Haematol. 157 (2), 230-239 (2012)
   PUBMED   22443383
REFERENCE   3  (bases 1 to 3747)
  AUTHORS   Nam,J., Mah,W. and Kim,E.
  TITLE     The SALM/Lrfn family of leucine-rich repeat-containing cell
            adhesion molecules
  JOURNAL   Semin. Cell Dev. Biol. 22 (5), 492-498 (2011)
   PUBMED   21736948
  REMARK    GeneRIF: SALM5/Lrfn5, has recently been implicated in severe
            progressive autism and familial schizophrenia, pointing to the
            clinical importance of SALMs.[review]
            Review article
REFERENCE   4  (bases 1 to 3747)
  AUTHORS   Mah,W., Ko,J., Nam,J., Han,K., Chung,W.S. and Kim,E.
  TITLE     Selected SALM (synaptic adhesion-like molecule) family proteins
            regulate synapse formation
  JOURNAL   J. Neurosci. 30 (16), 5559-5568 (2010)
   PUBMED   20410109
  REMARK    GeneRIF: Expression of SALM family proteins SALM3 and SALM5 in
            nonneural and neural cells induces both excitatory and inhibitory
            presynaptic differentiation in contacting axons.
REFERENCE   5  (bases 1 to 3747)
  AUTHORS   Morimura,N., Inoue,T., Katayama,K. and Aruga,J.
  TITLE     Comparative analysis of structure, expression and PSD95-binding
            capacity of Lrfn, a novel family of neuronal transmembrane proteins
  JOURNAL   Gene 380 (2), 72-83 (2006)
   PUBMED   16828986
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DA096504.1, AK096627.1, BC043165.1, AL138498.5 and AW013887.1.
            On Jul 31, 2008 this sequence version replaced gi:31542243.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            transcript and genomic sequence to make the sequence consistent
            with the reference genome assembly. The genomic coordinates used
            for the transcript record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK096627.1, BC043165.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025088, ERS025090 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-148               DA096504.1         1-148
            149-701             AK096627.1         122-674
            702-1920            BC043165.1         127-1345
            1921-2583           AK096627.1         1894-2556
            2584-3296           AL138498.5         69378-70090         c
            3297-3481           AK096627.1         3270-3454
            3482-3747           AW013887.1         1-266               c
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="14"
                     /map="14q21.1"
     gene            1..3747
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="leucine rich repeat and fibronectin type III domain
                     containing 5"
                     /db_xref="GeneID:145581"
                     /db_xref="HGNC:20360"
                     /db_xref="HPRD:17445"
                     /db_xref="MIM:612811"
     exon            1..1002
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     variation       59
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:80337487"
     variation       119
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:143707970"
     variation       126
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376386142"
     variation       229
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:186264704"
     variation       339
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:192016172"
     variation       440
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:78328447"
     variation       468
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:183383430"
     variation       525
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1137567"
     variation       606
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:141251236"
     variation       613
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373551302"
     variation       622..623
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:34520734"
     variation       634
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:76767345"
     variation       851
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:11620636"
     exon            1003..1178
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     variation       1071
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:183079892"
     exon            1179..2583
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     variation       1181
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:77016987"
     misc_feature    1190..1192
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="upstream in-frame stop codon"
     CDS             1199..3358
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="fibronectin type III, immunoglobulin and leucine
                     rich repeat domains 8; leucine-rich repeat and fibronectin
                     type-III domain-containing protein 5"
                     /codon_start=1
                     /product="leucine-rich repeat and fibronectin type-III
                     domain-containing protein 5 precursor"
                     /protein_id="NP_689660.2"
                     /db_xref="GI:31542244"
                     /db_xref="CCDS:CCDS9678.1"
                     /db_xref="GeneID:145581"
                     /db_xref="HGNC:20360"
                     /db_xref="HPRD:17445"
                     /db_xref="MIM:612811"
                     /translation="
MEKILFYLFLIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPPLLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIASNPAGEATQIVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNTSSSNGDTKLSQDKIVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLAAGTMYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQIQGCSVTLPQSVSKQAVGHEENAQCCKATSDNVIQSSETCSSQDSSTTTSALPPSWTSSTSVSQKQKRKTGTKPSTEPQNEAVTNVESQNTNRNNSTALQLASRPPDSVTEGPTSKRAHIKPNALLTNVDQIVQETQRLELI
"
     sig_peptide     1199..1249
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
     mat_peptide     1250..3355
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /product="Leucine-rich repeat and fibronectin type-III
                     domain-containing protein 5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2)"
     misc_feature    1352..1417
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 1"
     misc_feature    1361..1531
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    1424..1489
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 2"
     misc_feature    1496..1561
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 3"
     misc_feature    1568..1633
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 4"
     misc_feature    1640..1705
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 5"
     misc_feature    1643..1819
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    1712..1777
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 6"
     misc_feature    1784..1849
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     Region: LRR 7"
     misc_feature    1916..>2014
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Leucine rich repeat C-terminal domain; Region:
                     LRRCT; smart00082"
                     /db_xref="CDD:197506"
     misc_feature    2057..2320
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Immunoglobulin I-set domain; Region: I-set;
                     pfam07679"
                     /db_xref="CDD:191810"
     misc_feature    2099..2320
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Subgroup of the immunoglobulin (Ig) superfamily;
                     Region: Ig_2; cd05764"
                     /db_xref="CDD:143241"
     misc_feature    2459..2680
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /note="Fibronectin type 3 domain; One of three types of
                     internal repeats found in the plasma protein fibronectin.
                     Its tenth fibronectin type III repeat contains an RGD cell
                     recognition sequence in a flexible loop between 2 strands.
                     Approximately 2% of all...; Region: FN3; cl00065"
                     /db_xref="CDD:206813"
     misc_feature    2786..2848
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q96NI6.2);
                     transmembrane region"
     variation       1203
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199536784"
     variation       1214
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141649332"
     variation       1217
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:77336898"
     variation       1222
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146169929"
     variation       1267
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374199959"
     variation       1310
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:199855789"
     variation       1314
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:35910183"
     variation       1375
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1886164"
     variation       1388
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:185649544"
     variation       1396
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144132966"
     variation       1439
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:200283889"
     variation       1441
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370921286"
     variation       1456
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:151006633"
     variation       1484
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:190113136"
     variation       1519
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:181581182"
     variation       1533
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:76592962"
     variation       1548
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:111434182"
     variation       1550
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:139662562"
     variation       1639
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:117966123"
     variation       1713
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:145569146"
     variation       1793
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:140770648"
     variation       1824
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:188537104"
     variation       1885
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141598594"
     variation       1886
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:375396897"
     variation       1911
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:147067718"
     variation       1912
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:61742049"
     variation       1921
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:17854265"
     variation       1955
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147658218"
     variation       1972
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:367997664"
     variation       2067
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370216412"
     variation       2143
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150248310"
     variation       2167
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200743284"
     variation       2216
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201273688"
     variation       2257
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:61744159"
     variation       2300
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:143251931"
     variation       2376
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:368716591"
     variation       2383
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:201771170"
     variation       2419
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372315722"
     variation       2422
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:148376105"
     variation       2491
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:375380713"
     variation       2532
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200029150"
     exon            2584..3296
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     variation       2598
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369343795"
     variation       2646
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142301191"
     variation       2647
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141598076"
     variation       2727
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150445484"
     variation       2728
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181411518"
     variation       2744
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:138417169"
     variation       2764
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:6572117"
     variation       2790
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146218561"
     variation       2812
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375382591"
     variation       2868
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:184300558"
     variation       2884
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:139239177"
     variation       2889
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150568237"
     variation       2896
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149456109"
     variation       2954
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373989159"
     variation       2959
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:189076635"
     variation       3051
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143897378"
     variation       3057
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148679546"
     variation       3063
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142220815"
     variation       3095
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:376533514"
     variation       3135
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370624158"
     variation       3140
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150763995"
     variation       3153
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373913705"
     variation       3238
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:377068056"
     variation       3239
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139679791"
     variation       3241
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:112647558"
     variation       3253
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:34676437"
     variation       3265
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143357119"
     variation       3270
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:369488450"
     exon            3297..3340
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     exon            3341..3732
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /inference="alignment:Splign:1.39.8"
     variation       3349
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:116217484"
     variation       3371..3373
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace=""
                     /replace="ctc"
                     /db_xref="dbSNP:150172548"
     variation       3372
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200428617"
     variation       3381
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375213734"
     variation       3389
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:201953168"
     variation       3393
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:201250483"
     variation       3466
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:193174264"
     variation       3467
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:182543688"
     variation       3470
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:187190762"
     variation       3480
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:191949312"
     STS             3495..3662
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /standard_name="RH48353"
                     /db_xref="UniSTS:19790"
     variation       3516
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373916061"
     variation       3548
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:112048047"
     variation       3582
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:112965685"
     variation       3587..3588
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:201977258"
     variation       3598
                     /gene="LRFN5"
                     /gene_synonym="C14orf146; FIGLER8; SALM5"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:11539099"
ORIGIN      
atctgatgcatttgactgtcttttatccaactgcccagaagcaaatgtgttaactcggcgatgccccttcatgcccgggttcttgcagagctctgaggacgcccagacccattttcctggctggatttggagcggctgctgggctgtggacccaggtgtgtggatcgctttacccagaagcttggaaagcgccaatattaacctgcttccaggtacatcacaaggtcaagagagtgtcttgcagccctcttgtttccgtgtatctacaccttcttctcttggccagaaggatatttacgttttggttcacagcatttgaagccaaaagttcagcccttcgaactggtttgctatacaaaacaaaacaaaacaaataaggtaatgaggattgcttattaaactgcttaacaaaatccccgactcttcctcagccctttctcggctccctcctccccaccaaaatgtcaccagctcttgaattacgtggattcgggttggaggagaacttgaaggaaacgtgattaaagggctatgcgagaacgctctctttgctgcccgcggtccggtgggcttcgaagccaatcgtgagaaggaccggttccctccgtgctgcttcctccccgtgcagtgctgggtgtgcgtgtgcgagtgtgagtgcaagtgcgcgcgcgcccgggtgcgagtgtgtgtgagtgtgagcgtgtgtctgtgtgtgcgtgcgcggccgccctgcctctgcccgctccccgggcgcggagccgcgggtttcatggggcgattgcagcgattcccccacccagagcgacctgcgggcagcggcggcagtggcaggagccgcctttccgattccctacgatgcgggtgctgagctatggcaaagggcagcgaagtgacgagcgagacccgcgtacgactgtgaaagccacctggagccaccttgccgggattgtacctgcaggcagaaagtcttcctacgaccgtcttttcccttagaggcaccagaatccctgtaaccattcatccaggtgttgagaagatatgtagcagccgagcacccatcttttgacaccgtcctctgaaatcagctttggagatgctttcactctgtccgtcttctgcagcagccaggcagagtgccgactccttcacagccgtgaggaactcttcaggctccagaagctcttaaacctgatctacaatggaaaaaattcttttttatctgtttctcattggcatagcagtgaaagctcagatctgtccaaagcgttgtgtctgtcagattttgtctcctaatcttgcaaccctttgtgccaagaaagggcttttatttgttccaccaaacattgacagaagaactgtggaactgcggttggcagacaattttgttacaaatattaaaaggaaagattttgccaatatgaccagcttggtggacctgactctatccaggaatacaataagttttattacacctcatgctttcgctgacctacgaaatttgagggctttgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagtggtctttccaatcttcatcatttgatactgaacaacaatcagctgactttaatttcctctacagcgtttgatgatgtcttcgcccttgaggagctggatctgtcctataataatctagaaaccattccttgggatgctgttgagaagatggttagcttgcatacccttagtttggatcacaatatgattgataacattcctaaggggaccttctcccatttgcacaagatgactcggttagatgtgacatcaaataaattgcagaagctaccacctgaccctctctttcagcgagctcaggtactagcaacctcaggaatcataagcccatctacttttgcattaagttttggtggaaaccccttgcattgcaattgtgaattgttgtggttgaggcgtctgtccagagaagatgacttagagacctgtgcttctcctccacttttaactggccgctacttttggtcaattcctgaagaagagtttttgtgtgagcctcctctcattactcgtcatacacatgagatgagagtcctggagggacaaagggcaacactgaggtgcaaagccaggggagaccctgagcctgcaattcactggatttctcctgaagggaagcttatttcaaatgcaacaagatctctggtgtatgataacggaacacttgacattcttatcacaactgtaaaggatacaggtgcttttacctgcattgcttccaatcctgctggggaagcaacacaaatagtggatcttcatataattaagctccctcacttactaaatagtacaaaccatatccatgagcctgatcctggttcttcagatatctcaacttctaccaagtcaggttctaatacaagcagtagtaatggtgatactaaattgagtcaagataaaattgtggtggcagaagctacatcatcaacggcactacttaaatttaattttcaaagaaatatccctggaatacgtatgtttcaaatccagtacaatggtacttatgatgacacccttgtttacagaatgatacctcctacgagcaaaacttttctggtcaataatctggctgctggaactatgtatgacttgtgtgtcttggccatatatgatgatggcatcacttccctcactgccacaagagtcgtgggttgcatccagtttactacggaacaggattatgtgcgttgccatttcatgcagtctcagtttttgggaggcaccatgattattattattggtggaatcattgtagcatctgtgctggtattcatcattattctgatgatccggtataaggtttgcaacaataatgggcaacacaaggtcaccaaggttagcaatgtttattcccaaactaacggggctcaaatacaaggctgtagtgtaacgctgccccagtccgtgtccaaacaagctgtgggacacgaagagaatgcccagtgttgtaaagctaccagtgacaatgtgattcaatcttcagaaacttgttcgagtcaggactcctctaccactacctctgctttgcctccttcctggacttcaagcacttctgtgtcccaaaagcagaaaagaaagactggcacaaagccaagtacagaaccacagaatgaagccgtcacaaatgttgaatcccaaaacactaacaggaacaactcaactgccttgcagttagctagccgtcctcccgattctgtcacagaggggcccacgtctaaaagagcacatataaagccaaatgctttgctgactaatgttgaccagattgtccaggaaacacagaggctggagttaatctgaagagcaccacttctcctctctctcctgaaaaaatttgccactgatatttttactggataaaattcaaaaatgtttcaattcacaaaggctaattgttgaactggtgtcgtagaagaaattgtctacaggagccaaggtgaaagtctctgatgacggcggaactggctccattagaccatggttcatcctcttttaaaaccaaatttttttttcttctggcctacaagtattttttttttaaaaaagaaaaaaagcctacattggcatcaagttctgtatcaatccatcttacattgccatccatgatttaacagactgtagaatcttgaataatctatatcactttaacaaataaatgttttactatgacagaaaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:145581 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA

by @meso_cacase at DBCLS
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