GGRNA Home | Help | Advanced search

2024-04-20 00:49:56, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_148894              10542 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens biorientation of chromosomes in cell division 1-like 1
            (BOD1L1), mRNA.
ACCESSION   NM_148894
VERSION     NM_148894.2  GI:87299627
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 10542)
  AUTHORS   Olsen,J.V., Blagoev,B., Gnad,F., Macek,B., Kumar,C., Mortensen,P.
            and Mann,M.
  TITLE     Global, in vivo, and site-specific phosphorylation dynamics in
            signaling networks
  JOURNAL   Cell 127 (3), 635-648 (2006)
   PUBMED   17081983
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AF528529.1, AK090534.1, BX648206.1 and AB037748.2.
            On Feb 16, 2006 this sequence version replaced gi:22507398.
            
            CCDS Note: The coding region has been updated to extend the
            C-terminus following the addition of several exons at the 3' end.
            There are no full-length transcripts representing the update, but
            partial transcripts do span its length in both human and the mouse
            ortholog. The updated sequence includes a large exon 10 that has no
            single transcript spanning its full extent. Nonetheless, BX648206.1
            covers most of this exon, as does AB037748.2, which is spliced to
            the 3' neighboring exons. AF528529.1 and AK090534.1 are spliced to
            the 5' neighboring exons, supported by orangutan CR860680.1.
            Several tiled transcripts also span this exon in mouse, including
            AK140021.1, AF013969.1 and AK122495.1. Some transcripts appear to
            have polyA tails and terminate in this large exon, e.g.,
            BX648206.1, AK025965.1 and AF528529.1, but on closer inspection, it
            appears that these may be priming off internal 'A' nucleotides in
            exon 10, and they do not have polyA signals. The open reading frame
            represented in the update also shows good conservation in models
            from other species, including macaque XP_001098928.1, dog
            XP_536235.2, cow XP_585315.3, chicken XP_420784.2, and rat
            XP_001060944.1. It is also of note that the genomic alignments
            between these species show insertions/deletions in the region of
            exon 10 that are always in multiples of three, or else they are
            compensated in order to restore the reading frame. This is a strong
            signature of a protein-coding region and provides good supporting
            evidence for the validity of this exon/intron structure.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed/partial sample support ERS025081, ERS025082
                              [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1608              AF528529.1         1-1608
            1609-1648           AK090534.1         614-653
            1649-2584           AF528529.1         1667-2602
            2585-4222           BX648206.1         221-1858
            4223-7303           AB037748.2         367-3447
            7304-7304           BX648206.1         4938-4938
            7305-9763           AB037748.2         3449-5907
            9764-10542          AB037748.2         5909-6687
FEATURES             Location/Qualifiers
     source          1..10542
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
                     /map="4p16.1"
     gene            1..10542
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /note="biorientation of chromosomes in cell division
                     1-like 1"
                     /db_xref="GeneID:259282"
                     /db_xref="HGNC:31792"
     exon            1..360
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    13..15
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /note="upstream in-frame stop codon"
     CDS             118..9273
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /note="family with sequence similarity 44, member A"
                     /codon_start=1
                     /product="biorientation of chromosomes in cell division
                     protein 1-like 1"
                     /protein_id="NP_683692.2"
                     /db_xref="GI:87299628"
                     /db_xref="CCDS:CCDS3411.2"
                     /db_xref="GeneID:259282"
                     /db_xref="HGNC:31792"
                     /translation="
MATNPQPQPPPPAPPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAGAGDPQLVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFLATLNHKEEGSGNTAPDDEKPDTSLITQGVPTPGPSANVANDAMSILETITSLNQEASAARASTETSNAKTSERASKKLPSQPTTDTSTDKERTSEDMADKEKSTADSGGEGLETAPKSEEFSDLPCPVEEIKNYTKEHNNLILLNKDVQQESSEQKNKSTDKGEKKPDSNEKGERKKEKKEKTEKKFDHSKKSEDTQKVKDEKQAKEKEVESLKLPSEKNSNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVVTSDSMEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSDSDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEESSTKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKTSEHCEKEKISSSKELKHVHAKSEPSKPARRLSESLHVVDENKNESKLEREHKRRTSTPVIMEGVQEETDTRDVKRQVERSEICTEEPQKQKSTLKNEKHLKKDDSETPHLKSLLKKEVKSSKEKPEREKTPSEDKLSVKHKYKGDCMHKTGDETELHSSEKGLKVEENIQKQSQQTKLSSDDKTERKSKHRNERKLSVLGKDGKPVSEYIIKTDENVRKENNKKERRLSAEKTKAEHKSRRSSDSKIQKDSLGSKQHGITLQRRSESYSEDKCDMDSTNMDSNLKPEEVVHKEKRRTKSLLEEKLVLKSKSKTQGKQVKVVETELQEGATKQATTPKPDKEKNTEENDSEKQRKSKVEDKPFEETGVEPVLETASSSAHSTQKDSSHRAKLPLAKEKYKSDKDSTSTRLERKLSDGHKSRSLKHSSKDIKKKDENKSDDKDGKEVDSSHEKARGNSSLMEKKLSRRLCENRRGSLSQEMAKGEEKLAANTLSTPSGSSLQRPKKSGDMTLIPEQEPMEIDSEPGVENVFEVSKTQDNRNNNSQQDIDSENMKQKTSATVQKDELRTCTADSKATAPAYKPGRGTGVNSNSEKHADHRSTLTKKMHIQSAVSKMNPGEKEPIHRGTTEVNIDSETVHRMLLSAPSENDRVQKNLKNTAAEEHVAQGDATLEHSTNLDSSPSLSSVTVVPLRESYDPDVIPLFDKRTVLEGSTASTSPADHSALPNQSLTVRESEVLKTSDSKEGGEGFTVDTPAKASITSKRHIPEAHQATLLDGKQGKVIMPLGSKLTGVIVENENITKEGGLVDMAKKENDLNAEPNLKQTIKATVENGKKDGIAVDHVVGLNTEKYAETVKLKHKRSPGKVKDISIDVERRNENSEVDTSAGSGSAPSVLHQRNGQTEDVATGPRRAEKTSVATSTEGKDKDVTLSPVKAGPATTTSSETRQSEVALPCTSIEADEGLIIGTHSRNNPLHVGAEASECTVFAAAEEGGAVVTEGFAESETFLTSTKEGESGECAVAESEDRAADLLAVHAVKIEANVNSVVTEEKDDAVTSAGSEEKCDGSLSRDSEIVEGTITFISEVESDGAVTSAGTEIRAGSISSEEVDGSQGNMMRMGPKKETEGTVTCTGAEGRSDNFVICSVTGAGPREERMVTGAGVVLGDNDAPPGTSASQEGDGSVNDGTEGESAVTSTGITEDGEGPASCTGSEDSSEGFAISSESEENGESAMDSTVAKEGTNVPLVAAGPCDDEGIVTSTGAKEEDEEGEDVVTSTGRGNEIGHASTCTGLGEESEGVLICESAEGDSQIGTVVEHVEAEAGAAIMNANENNVDSMSGTEKGSKDTDICSSAKGIVESSVTSAVSGKDEVTPVPGGCEGPMTSAASDQSDSQLEKVEDTTISTGLVGGSYDVLVSGEVPECEVAHTSPSEKEDEDIITSVENEECDGLMATTASGDITNQNSLAGGKNQGKVLIISTSTTNDYTPQVSAITDVEGGLSDALRTEENMEGTRVTTEEFEAPMPSAVSGDDSQLTASRSEEKDECAMISTSIGEEFELPISSATTIKCAESLQPVAAAVEERATGPVLISTADFEGPMPSAPPEAESPLASTSKEEKDECALISTSIAEECEASVSGVVVESENERAGTVMEEKDGSGIISTSSVEDCEGPVSSAVPQEEGDPSVTPAEEMGDTAMISTSTSEGCEAVMIGAVLQDEDRLTITRVEDLSDAAIISTSTAECMPISASIDRHEENQLTADNPEGNGDLSATEVSKHKVPMPSLIAENNCRCPGPVRGGKEPGPVLAVSTEEGHNGPSVHKPSAGQGHPSAVCAEKEEKHGKECPEIGPFAGRGQKESTLHLINAEEKNVLLNSLQKEDKSPETGTAGGSSTASYSAGRGLEGNANSPAHLRGPEQTSGQTAKDPSVSIRYLAAVNTGAIKADDMPPVQGTVAEHSFLPAEQQGSEDNLKTSTTKCITGQESKIAPSHTMIPPATYSVALLAPKCEQDLTIKNDYSGKWTDQASAEKTGDDNSTRKSFPEEGDIMVTVSSEENVCDIGNEESPLNVLGGLKLKANLKMEAYVPSEEEKNGEILAPPESLCGGKPSGIAELQREPLLVNESLNVENSGFRTNEEIHSESYNKGEISSGRKDNAEAISGHSVEADPKEVEEEERHMPKRKRKQHYLSSEDEPDDNPDVLDSRIETAQRQCPETEPHDTKEENSRDLEELPKTSSETNSTTSRVMEEKDEYSSSETTGEKPEQNDDDTIKSQEEDQPIIIKRKRGRPRKYPVETTLKMKDDSKTDTGIVTVEQSPSSSKLKVMQTDESNKETANLQERSISNDDGEEKIVTSVRRRGRKPKRSLTVSDDAESSEPERKRQKSVSDPVEDKKEQESDEEEEEEEEDEPSGATTRSTTRSEAQRSKTQLSPSIKRKREVSPPGARTRGQQRVEEAPVKKAKR
"
     misc_feature    286..600
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /note="COMPASS (Complex proteins associated with Set1p)
                     component shg1; Region: COMPASS-Shg1; pfam05205"
                     /db_xref="CDD:191231"
     misc_feature    913..915
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    1534..1536
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="N6-acetyllysine; propagated from
                     UniProtKB/Swiss-Prot (Q8NFC6.2); acetylation site"
     misc_feature    1561..1563
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    1561..1563
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
                     /citation=[1]
     misc_feature    1567..1569
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    1567..1569
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    2020..2022
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    3550..3552
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    3550..3552
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    4177..4179
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphothreonine; propagated from
                     UniProtKB/Swiss-Prot (Q8NFC6.2); phosphorylation site"
     misc_feature    4708..4710
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    5245..5247
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    5245..5247
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    7618..7620
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8446..8448
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
                     /citation=[1]
     misc_feature    8452..8454
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8452..8454
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
                     /citation=[1]
     misc_feature    8455..8457
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8455..8457
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
                     /citation=[1]
     misc_feature    8830..8832
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8836..8838
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8977..8979
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    8983..8985
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphothreonine; propagated from
                     UniProtKB/Swiss-Prot (Q8NFC6.2); phosphorylation site"
     misc_feature    8989..8991
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    9007..9009
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    9007..9009
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
                     /citation=[1]
     misc_feature    9034..9036
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     misc_feature    9073..9075
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8NFC6.2); phosphorylation site"
     exon            361..485
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            486..676
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            677..1291
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1292..1441
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1442..1608
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1609..1720
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1721..1859
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1860..1932
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            1933..8071
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     STS             3526..3630
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /standard_name="D4S2702"
                     /db_xref="UniSTS:153588"
     STS             3532..3719
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /standard_name="D4S259"
                     /db_xref="UniSTS:42897"
     STS             6357..6649
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /standard_name="D4S3194"
                     /db_xref="UniSTS:76611"
     exon            8072..8136
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8137..8221
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8222..8265
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8266..8326
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8327..8397
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8398..8470
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8471..8550
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8551..8635
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8636..8709
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8710..8785
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8786..8820
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8821..8866
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8867..8916
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            8917..9001
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            9002..9155
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     exon            9156..10542
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /inference="alignment:Splign:1.39.8"
     STS             9804..9910
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /standard_name="SHGC-36204"
                     /db_xref="UniSTS:2317"
     variation       9861
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1053032"
     STS             10262..10481
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /standard_name="RH16627"
                     /db_xref="UniSTS:63085"
     variation       10441
                     /gene="BOD1L1"
                     /gene_synonym="BOD1L; FAM44A"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:200919156"
ORIGIN      
ccgctggttccgtaacaacatcccgttggcttccctcaggcggcgggaccagtgcagccgccgcctcccaggatcgtccgccggtcagggcccttgccctccccggcacaggccaccatggccaccaacccacagccgcagccgcctcctccggcgccgccgcctcccccgccgcagccgcagccgcagccaccgccgccgccgccgggccccggggctggccccggcgcgggcggggcgggcggcgcgggtgcgggcgccggggacccgcagctcgtggccatgatcgtgaaccacctcaagagccaggggctcttcgaccagttccgcagagactgcctggccgacgtggacaccaagcctgcgtatcagaatctgagacagcgtgttgacaactttgttgcaaatcacttggcaactcacacatggagtccgcatctcaataagaaccagctaagaaacaacattagacaacaagtcctcaaatcaggaatgttggagtctggtattgaccgaattatttctcaggttgtggacccaaagatcaaccacacattcagacctcaggtagagaaagctgtgcatgagtttttggccacgctaaatcacaaagaggaaggaagtggcaacacagctcccgatgatgagaaaccagacacttcccttattacacaaggtgttcctactcctgggcccagtgctaatgtagccaatgatgccatgtcgatattggaaaccataacttctcttaaccaagaagccagtgctgctagggcttcaacagaaacatcaaatgccaagaccagtgagagagcgtcaaaaaaacttccatctcagccaaccactgatactagtactgacaaagaaagaacttcagaggacatggctgataaagaaaaatctacagctgactctggaggtgaaggactggaaacagccccaaagtctgaagagttcagcgacctcccctgtccagtcgaagaaattaaaaattacacaaaagagcataataatttaattctgctaaataaggatgttcaacaggaaagcagtgagcaaaaaaataaatcaacagacaaaggtgaaaagaagccagacagcaatgagaaaggagaaagaaagaaagaaaagaaggaaaagactgaaaagaaatttgatcactcaaaaaagagtgaagatacacagaaagttaaagatgaaaaacaagcaaaggaaaaagaagtagagagtttaaaacttccttcagaaaagaacagtaataaagctaaaactgttgaagggacaaaagaagatttctctttgatagattctgatgtggatggacttacagacatcacagttagctctgttcataccagtgacctttcatcttttgaagaagatactgaggaggaagttgtaacgtctgatagcatggaagaaggagagattacgtcagatgatgaagagaagaacaaacagaataaaacaaaaactcaaactagtgattctagtgaaggaaaaacaaaaagtgtacggcatgcgtatgtccacaaaccatatctttactcaaaatactatagtgattctgatgatgagcttactgtagaacaacgacgacagtccattgccaaagaaaaagaagagaggcttttaagaaggcaaatcaatagagaaaaacttgaagaaaaacgaaaacagaaagcagaaaagacaaagtcttcaaaaaccaagggtcaaggcaggagtagtgtggacttagaagaatcatcaacaaagagtttggaacctaaagccgccagaattaaagaagtccttaaagaacggaaagttttagaaaaaaaagtagccttaagcaaaaagagaaaaaaagattcaaggaatgttgaagagaactccaaaaagaaacagcaatatgaagaagattccaaagaaacccttaaaacaagtgagcattgtgaaaaggaaaaaatttcttcttcaaaggagctgaagcatgttcatgcaaaaagtgaaccaagtaaacctgcccggagactttcagagtctttgcatgtagttgacgaaaacaaaaatgaatccaaattagaaagagaacataaaagacggacatctacccctgttatcatggagggggtacaggaagagactgacacaagagatgtaaaaaggcaagtagaacgctcagaaatttgcaccgaagagccccagaaacagaaaagcacacttaaaaacgaaaagcatctaaagaaagatgattctgaaacaccacatttgaaaagcctacttaagaaagaggtgaaatcctccaaggagaagcctgaaagagagaaaactccatcggaagacaaattgtctgtgaaacataaatataaaggtgattgtatgcataaaacaggtgatgagactgagcttcactcttctgagaaaggtttaaaagtagaggaaaatattcaaaagcaaagtcaacaaacaaagctttcttcagatgataaaaccgaacgaaaaagtaaacataggaatgaaaggaaattatcagtattaggcaaagatggaaagccagtttctgaatatattataaaaacagatgagaatgttcgtaaagaaaacaacaaaaaagagagacgcttgtcagctgaaaaaactaaggcagagcacaaatcaagaaggtcaagtgattctaaaattcagaaagattctctgggttccaagcaacatggtatcacattacagagaagaagtgaaagttattcggaagataagtgtgatatggactccactaacatggatagtaatttgaaaccagaagaggttgttcacaaggagaaacgacgaacaaagagcttgttagaagagaaacttgtgttgaagtctaaatcaaaaactcaaggcaaacaggtaaaagttgtagaaacagaattacaagaaggtgccacaaaacaggcaaccactccaaaaccagacaaggagaagaacacagaagaaaatgactcagaaaaacagcgtaagtctaaagttgaagacaaaccttttgaagaaactggtgttgaacctgtattagagactgcttcttcttcagcacatagtacacagaaggattctagtcatagagccaagttaccattagcaaaggagaaatataagagtgataaagactccacttccaccaggcttgagagaaagttgtcagatggccacaaaagcagaagcttaaagcatagtagtaaagacataaaaaagaaggacgaaaataaatcagatgacaaggatggtaaagaagttgacagtagtcatgaaaaggccagaggtaatagttcactcatggaaaagaaattaagtagaaggttgtgcgaaaatcggagaggaagcttgtcacaagaaatggccaaaggagaagaaaaattagcagcaaacactttgagcactcccagcggttcctcccttcagagaccaaaaaagagtggtgatatgacattgatccctgaacaagagccaatggaaattgattctgagccaggtgttgaaaatgtgtttgaagtatctaaaacccaagacaaccgcaataataattctcagcaagacattgactctgaaaatatgaaacaaaaaacttctgccactgttcaaaaggatgaattgagaacttgcacagcagattcaaaagcaacagctccagcttataagccaggccgtggaacaggagttaatagtaattctgaaaagcatgccgatcatagaagcaccttgaccaagaaaatgcatatacaaagtgctgtgtccaaaatgaaccctggggagaaagaacccattcatagaggaactactgaagtgaatatagattctgaaactgttcatagaatgttactgagtgccccatcagaaaatgatagggtacagaagaatttgaaaaacacagctgctgaagaacatgttgctcaaggagatgccactcttgaacattccacaaatttagactcctcaccatccttaagttcagtgactgttgtgcctctgagggaatcgtatgatccagatgtaattcctctgtttgacaaaagaactgttttggaaggtagcacagccagcacctcccctgcggatcactctgctctccctaaccaaagtctgactgttagggaatcagaagtccttaagacaagtgacagcaaagaaggtggtgaaggtttcacagtagatacaccagcaaaagcaagcatcactagcaaaagacacattccagaagctcaccaggctactttattggatggtaaacaaggaaaggtaatcatgcctcttggaagtaagttaacgggcgtgattgtggaaaatgagaatattaccaaagaaggtggcttagtggacatggccaagaaagaaaatgacttaaatgcagagcccaatttaaagcagacaattaaagcaacagtagagaatggcaagaaggatggcattgctgttgatcatgttgtaggcctgaatacagaaaaatatgctgaaactgtcaaacttaagcataaaagaagcccaggtaaagtaaaagacatatcaattgatgttgaaagaaggaatgaaaacagtgaggtagacaccagtgctggaagtggctctgcaccctctgttttacaccaaaggaacggacaaactgaggatgtggcaactgggcctaggagagcagaaaagacttctgttgccactagtactgaagggaaggacaaagatgtcaccttaagtccagtgaaggctgggcctgccacaaccacttcttcagaaacaagacaaagtgaggtggctttgccttgcaccagcattgaggcagatgaaggcctcataataggaacacattccagaaataatcctcttcatgttggtgcagaagccagtgaatgcactgtttttgctgcagctgaagaaggtggggctgttgtcacagagggatttgctgaaagtgaaaccttcctcacaagcactaaggaaggggaaagtggggagtgtgctgtggctgaatctgaggacagagcagcagacctactggctgtgcatgcagttaaaatcgaagccaatgtaaatagcgttgtgacagaggaaaaggatgatgctgtaaccagtgcaggctctgaagaaaaatgtgatggttctttaagtagagactcagaaatagttgaaggaactattacttttattagtgaagttgaaagtgatggagcagttacaagtgctggaacagagataagagcaggatctataagcagtgaagaggtggatggctcccagggaaatatgatgagaatgggtcccaaaaaagaaacagagggcactgtgacatgtacaggagcagaaggcagaagtgataactttgtgatctgctcagtaactggagcagggccccgggaggaacgcatggttacaggtgcaggtgttgtcctgggagataatgatgcaccaccaggaacaagtgccagccaagaaggagatggttctgtgaatgatggtacagaaggtgagagtgcagtcaccagcacggggataacagaagatggagaggggccagcaagttgcacaggttcagaagatagcagcgaaggctttgctataagttctgaatcggaagaaaatggagagagtgcaatggacagcacagtggccaaagaaggcactaatgtaccattagttgctgctggtccttgtgatgatgaaggcattgtgactagcacaggcgcaaaagaggaagacgaggaaggggaggatgttgtgactagtactggaagaggaaatgaaattgggcatgcttcaacttgtacagggttaggagaagaaagtgaaggggtcttgatttgtgaaagtgcagaaggggacagtcagattggtactgtggtagagcatgtggaagctgaggctggagctgccatcatgaatgcaaatgaaaataatgttgacagcatgagtggcacagagaaaggaagtaaagacacagatatctgctccagtgcaaaagggattgtagaaagcagtgtgaccagtgcagtctcaggaaaggatgaagtgacaccagttccaggaggttgtgagggtcctatgactagtgctgcatctgatcaaagtgacagtcagctcgaaaaagttgaagataccactatttccactggcctggtcgggggtagttacgatgttcttgtatctggtgaagtcccagaatgtgaagttgctcacacatcaccaagtgaaaaagaagatgaggacatcatcacctctgtagaaaatgaagagtgtgatggtctcatggcaactacagccagtggtgatattaccaaccagaatagcttagcagggggtaaaaatcaaggcaaagttttgattatttccaccagtaccacaaatgattacacccctcaggtaagcgcaattacagatgtggaaggaggtctctcagatgctctgagaactgaagaaaatatggaaggtaccagagtaaccacagaagaatttgaggcccccatgcccagtgcagtctcaggagatgacagccaactcactgccagcagaagtgaagagaaagatgagtgtgccatgatttccacaagcataggggaagaattcgaattgcctatctccagtgcaacaaccatcaagtgtgctgaaagtcttcagccggttgctgcagcagtggaagaaagggctacaggtccagtcttgataagcaccgccgactttgaggggcctatgcccagtgcgcccccagaagctgaaagtcctcttgcctcaaccagcaaggaggagaaggatgaatgtgctctcatttccactagcatagcagaagaatgtgaggcttctgtttccggtgtagttgttgaaagtgaaaatgagcgagctggcacagtcatggaagaaaaagacgggagtggcatcatctctacgagctcggtggaagactgtgagggcccagtgtccagtgctgtccctcaagaggaaggcgacccctcagtcacaccagcggaagagatgggtgacaccgccatgatttccacaagcacctctgaagggtgtgaagcagtcatgattggtgctgtcctccaggatgaagatcggctcaccatcacaagagtagaagacttgagcgatgctgccatcatctccaccagcacagcagaatgtatgccaatttccgccagcattgacagacatgaagagaatcagctgactgcagacaacccagaagggaacggtgacctgtcagccacagaagtgagcaagcacaaggtccccatgcccagcctaattgctgagaataactgtcggtgtcctgggccagtcaggggaggcaaagaaccgggtcccgtgttggcagtgagcaccgaggaggggcacaacgggccatcagtccacaagccctctgcagggcaaggccatccaagtgctgtttgtgcggaaaaagaagagaagcatggcaaggagtgccccgaaataggaccatttgcaggaagaggacagaaagagagcactttacacctcataaatgcagaagagaagaatgtattgttgaactcccttcagaaagaagataagagcccagagacagggacagcagggggcagtagcacagcaagttattcagcaggaaggggcttagaggggaatgctaactcacctgcccacctgagaggaccagaacagacgtctgggcagacggctaaggatccctctgtcagcattcgctatttggcagcagtaaacaccggtgctataaaagctgatgacatgccacctgttcaagggaccgtggctgagcattcctttcttcctgctgagcagcaggggtctgaagacaacttgaaaaccagtaccaccaaatgtattactggccaagaatcaaaaattgctccttcccacacaatgatccctccagctacttacagtgtagctctgttggctcctaaatgtgagcaggacttgactataaagaatgattatagtggcaaatggactgatcaagcatctgctgagaaaacaggagatgataacagcacaaggaaatcattccctgaggaaggagacataatggttactgtgtcttctgaagaaaatgtgtgtgacataggcaatgaagagtctccattgaatgttttgggaggattgaaactgaaagccaacttgaaaatggaggcttatgtgccttcagaggaagagaaaaatggtgaaattctggcaccaccagaaagtctgtgtgggggaaagccaagtggaatagctgaactccagagggagcctttgttggtgaatgaatcactaaatgttgaaaattcaggcttcagaacaaatgaagaaattcatagcgaatcttataacaaaggagagatatccagtggtagaaaagacaacgcagaagccataagcggtcacagtgttgaagcagatcctaaagaggttgaagaggaagaaaggcatatgcctaaaagaaaaagaaagcagcattatctctcttcagaagatgaaccagatgataatccagatgtcctggattccagaatagaaacagcacaaaggcagtgtcctgaaacggagccacatgacacaaaggaagagaactccagagatttggaagaattacctaaaaccagttctgagacaaatagcactacctcaagggtcatggaagaaaaagatgaatatagcagcagtgaaactactggtgaaaagccagagcagaacgatgatgacaccataaaatctcaggaggaagatcagccaataattattaaaaggaaaagaggaagacctcgcaaataccctgtagaaacaacgttaaaaatgaaagacgactccaaaacagatactggcattgtcactgtagaacaatctccatctagcagcaaactgaaagtaatgcaaacagatgaatccaataaagaaacagctaacctacaagaaagaagtataagcaatgatgatggtgaagaaaaaatagtaacaagtgtgcgtcggagaggaagaaaacccaaacgttctctcactgtatcagatgatgctgaatcctcagagccagaaagaaaacgccagaaatcagtttctgatccagtggaggacaagaaagagcaggagtctgatgaggaagaggaagaagaggaagaggacgagccttcaggagccaccacaagatccaccaccagatcagaggctcagagatcaaagacacagctctccccttctatcaagcgcaagagagaagtcagccctcctggggcccgaacaagaggccagcaaagggtggaggaagcccctgtgaaaaaagcgaagcgataatcctgaccactgctgccctaggcttatggaggaacacggtggagaggaaagagacatgccttggtggccataggcttctctttaaccaggaaaaagatatgcatgtgctgtaagtccctaggtgcaagctttttcttgttatgttttaaacagctttataaactattgttcatagaagatattatgtacatttatttcagataaaggacaataagtttactttgtatctgaactcaaaacaaagtagttgtatattttaacattcaaaattgggatttcccaatgtgacacatcatgaatgcaaacccctccagcccatcagacgccaggctgcctactggtaatctgtgtatagtatataaacatgtaaaaataggttgtattttactctatgtatgatgctaatcaatgaacactttatttattttacagagaaaacttatctgtgaactttactatatatctgtttattttactttattttttttttaaataaaaagggttttaaatgctatgcagtcattagtagaaaattttttaggactctgcctgctctgtaactatcttaatatgatctggcagaaactcgcatgtatccaagtaaagtagtttagctaaagaaaggttcttcattgcttttctgttcacagttgtggctctgttttttaagaatgtaacttgtttttagattatacttgcatctgtgactttactaccagccacgttgacacaaaacaggttctggttcaggtaaagttgcgtcagtcacctgcagcagaaatccctcttcattcctcttctctgtgttcattcctcttctgtgctgttctgaagcttctaccaatactctttccatattgtctttttcagtgaagagaaatgcattcaagattaggtccctcctgtctatccagtttcaggattttatgttgttttatacacagttatttcagtatagaaactggctttattgccaagtgtttttttaaacatgttttaactctcatatgagcaaactgtccaacttcagtttttcataagattaaacttcttacgatcaaatttgtctcttgcaatgatgtgatgagttgccaaataattgagattattttaaaatgttttgttcatattcttgttttataattaaaatttacattcagtgtgtatgggtttttttttttattttgactcttaatgtaaggtggatatttctgtcattttacatggtttcttactgagattttatatataaattataaaatgtttacc
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:259282 -> Molecular function: GO:0003677 [DNA binding] evidence: IEA

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.