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2024-04-19 15:15:01, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_138959 8691 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens VANGL planar cell polarity protein 1 (VANGL1),
transcript variant 1, mRNA.
ACCESSION NM_138959 NM_024062
VERSION NM_138959.2 GI:83415182
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8691)
AUTHORS Anastas,J.N., Biechele,T.L., Robitaille,M., Muster,J.,
Allison,K.H., Angers,S. and Moon,R.T.
TITLE A protein complex of SCRIB, NOS1AP and VANGL1 regulates cell
polarity and migration, and is associated with breast cancer
progression
JOURNAL Oncogene 31 (32), 3696-3708 (2012)
PUBMED 22179838
REMARK GeneRIF: NOS1AP colocalizes with both SCRIB and VANGL1 along
cellular protrusions in metastatic breast cancer cells, but does
not colocalize with either SCRIB or VANGL1 at cell junctions in
normal breast cells
REFERENCE 2 (bases 1 to 8691)
AUTHORS Lee,S., Song,Y.A., Park,Y.L., Cho,S.B., Lee,W.S., Lee,J.H.,
Chung,I.J., Kim,K.K., Rew,J.S. and Joo,Y.E.
TITLE Expression of KITENIN in human colorectal cancer and its relation
to tumor behavior and progression
JOURNAL Pathol. Int. 61 (4), 210-220 (2011)
PUBMED 21418393
REMARK GeneRIF: KITENIN is associated with human colorectal cancer
progression including invasion and metastasis.
REFERENCE 3 (bases 1 to 8691)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Apuzzo,S. and Gros,P.
TITLE Transmembrane topology of mammalian planar cell polarity protein
Vangl1
JOURNAL Biochemistry 50 (12), 2274-2282 (2011)
PUBMED 21291170
REMARK GeneRIF: a compact membrane-associated portion with very short
predicted extra- and intracellular loops, while the protein harbors
a large intracellular domain
REFERENCE 4 (bases 1 to 8691)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Kibar,Z. and Gros,P.
TITLE Loss of membrane targeting of Vangl proteins causes neural tube
defects
JOURNAL Biochemistry 50 (5), 795-804 (2011)
PUBMED 21142127
REMARK GeneRIF: Loss of membrane targeting of Vangl1 and Vangl2 proteins
causes neural tube defects.
REFERENCE 5 (bases 1 to 8691)
AUTHORS Ryu,H.S., Park,Y.L., Park,S.J., Lee,J.H., Cho,S.B., Lee,W.S.,
Chung,I.J., Kim,K.K., Lee,K.H., Kweon,S.S. and Joo,Y.E.
TITLE KITENIN is associated with tumor progression in human gastric
cancer
JOURNAL Anticancer Res. 30 (9), 3479-3486 (2010)
PUBMED 20944126
REMARK GeneRIF: KITENIN plays an important role in human gastric cancer
progression by AP-1 activation.
REFERENCE 6 (bases 1 to 8691)
AUTHORS Kalabis,J., Rosenberg,I. and Podolsky,D.K.
TITLE Vangl1 protein acts as a downstream effector of intestinal trefoil
factor (ITF)/TFF3 signaling and regulates wound healing of
intestinal epithelium
JOURNAL J. Biol. Chem. 281 (10), 6434-6441 (2006)
PUBMED 16410243
REMARK GeneRIF: VANGL protein may serve as an effector mediating the
intestinal trefoil factor (ITF) healing response of the intestinal
mucosa.
REFERENCE 7 (bases 1 to 8691)
AUTHORS Doudney,K., Ybot-Gonzalez,P., Paternotte,C., Stevenson,R.E.,
Greene,N.D., Moore,G.E., Copp,A.J. and Stanier,P.
TITLE Analysis of the planar cell polarity gene Vangl2 and its
co-expressed paralogue Vangl1 in neural tube defect patients
JOURNAL Am. J. Med. Genet. A 136 (1), 90-92 (2005)
PUBMED 15952208
REMARK Erratum:[Am J Med Genet A. 2005 Nov 1;138(4):415]
REFERENCE 8 (bases 1 to 8691)
AUTHORS Lee,J.H., Park,S.R., Chay,K.O., Seo,Y.W., Kook,H., Ahn,K.Y.,
Kim,Y.J. and Kim,K.K.
TITLE KAI1 COOH-terminal interacting tetraspanin (KITENIN), a member of
the tetraspanin family, interacts with KAI1, a tumor metastasis
suppressor, and enhances metastasis of cancer
JOURNAL Cancer Res. 64 (12), 4235-4243 (2004)
PUBMED 15205336
REFERENCE 9 (bases 1 to 8691)
AUTHORS Yagyu,R., Hamamoto,R., Furukawa,Y., Okabe,H., Yamamura,T. and
Nakamura,Y.
TITLE Isolation and characterization of a novel human gene, VANGL1, as a
therapeutic target for hepatocellular carcinoma
JOURNAL Int. J. Oncol. 20 (6), 1173-1178 (2002)
PUBMED 12011995
REFERENCE 10 (bases 1 to 8691)
AUTHORS Katoh,M.
TITLE Molecular cloning and characterization of Strabismus 2 (STB2)
JOURNAL Int. J. Oncol. 20 (5), 993-998 (2002)
PUBMED 11956595
REMARK GeneRIF: Molecular cloning and characterization of Strabismus 2
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BM552933.1, AB075805.1 and
AL450389.12.
This sequence is a reference standard in the RefSeqGene project.
On Dec 9, 2005 this sequence version replaced gi:20373170.
Summary: This gene encodes a member of the tretraspanin family. The
encoded protein may be involved in mediating intestinal trefoil
factor induced wound healing in the intestinal mucosa. Mutations in
this gene are associated with neural tube defects. Alternate
splicing results in multiple transcript variants. [provided by
RefSeq, Feb 2010].
Transcript Variant: This variant (1) represents the longest
transcript and encodes the longer isoform (1). Both variants 1 and
2 encode the same isoform (1).
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC065272.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025085, ERS025087 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-503 BM552933.1 20-522
504-2321 AB075805.1 245-2062
2322-8691 AL450389.12 55279-61648
FEATURES Location/Qualifiers
source 1..8691
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p13.1"
gene 1..8691
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="VANGL planar cell polarity protein 1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="HPRD:18279"
/db_xref="MIM:610132"
exon 1..134
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 46
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:116216703"
variation 48
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:191609592"
exon 135..342
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 157
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:181583261"
misc_feature 206..208
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="upstream in-frame stop codon"
variation 217
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371591397"
variation 234
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:78368849"
variation 240
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371100144"
variation 243
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375618149"
variation 254
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:185393860"
CDS 272..1846
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="isoform 1 is encoded by transcript variant 1;
strabismus 2; KAI1 C-terminal interacting tetraspanin;
vang-like protein 1; van Gogh-like protein 1; loop-tail
protein 2 homolog; vang-like 1 (van gogh, Drosophila)"
/codon_start=1
/product="vang-like protein 1 isoform 1"
/protein_id="NP_620409.1"
/db_xref="GI:20373171"
/db_xref="CCDS:CCDS883.1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="HPRD:18279"
/db_xref="MIM:610132"
/translation="
MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIVFVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV
"
misc_feature 338..1843
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="Strabismus protein; Region: Strabismus; pfam06638"
/db_xref="CDD:148316"
misc_feature 623..685
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 725..787
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 818..880
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 938..1000
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
variation 307
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371629555"
variation 338
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:374630481"
exon 343..475
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 344
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61734296"
variation 348
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143990097"
variation 369
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:78535164"
variation 371
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372052239"
variation 374
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375505955"
variation 375
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369543626"
variation 385
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201840785"
variation 422
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200391853"
exon 476..1083
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 502
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:186509771"
variation 509
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:139472200"
variation 516
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371028647"
variation 519
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146695372"
variation 520
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146495414"
STS 536..1535
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="Vangl1"
/db_xref="UniSTS:532467"
variation 540
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374024136"
variation 545
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143196463"
variation 556
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140451005"
variation 578
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147048524"
variation 583
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:146723580"
variation 594
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141673853"
variation 601
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41275546"
variation 613
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141525464"
variation 614
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370292117"
variation 616
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:79828493"
variation 617
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:4839469"
variation 668
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141482063"
variation 676
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200325939"
variation 706
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:34768472"
variation 753
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:201871883"
variation 763
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372165510"
variation 781
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368383358"
variation 788
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200535188"
variation 789
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148341022"
variation 794
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142594314"
variation 795
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201441696"
variation 808
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201493360"
variation 817
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143094973"
variation 847
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146175997"
variation 897
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201593132"
variation 911
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143395094"
variation 920
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:373384296"
variation 952
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201698322"
variation 956
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143956994"
variation 985
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376477305"
variation 986
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918218"
variation 991
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200762200"
variation 1015
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148388816"
variation 1023
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201630629"
variation 1036
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368722418"
variation 1037
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199932833"
variation 1051
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373473714"
variation 1058
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377435467"
variation 1078
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200039235"
exon 1084..1217
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1092
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918219"
variation 1109
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370403671"
variation 1118
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139744440"
variation 1139
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145309218"
variation 1155
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:77983133"
variation 1156
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201705477"
variation 1167
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:142348368"
variation 1173
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:373814054"
variation 1192
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:148965020"
variation 1210
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:367774972"
exon 1218..1350
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1231
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143754434"
variation 1248
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141396495"
variation 1254
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:121918220"
variation 1272
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368071458"
variation 1275
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199526468"
variation 1284
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:74117015"
variation 1295
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:137860752"
variation 1311
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:34059106"
variation 1312
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149279018"
variation 1321
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147220426"
exon 1351..1585
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1398
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200389969"
variation 1437
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:151256445"
variation 1438
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376015336"
variation 1443
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:140485834"
variation 1450
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370067272"
variation 1460
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373242373"
variation 1468
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376174821"
variation 1503
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369450463"
variation 1517
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146596086"
variation 1529
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189584852"
variation 1570
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145137292"
variation 1571
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143016040"
exon 1586..8691
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1598
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371428273"
variation 1611
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148199776"
variation 1612
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150326572"
STS 1649..1799
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75371"
/db_xref="UniSTS:73877"
variation 1715
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143622439"
variation 1741
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199542978"
variation 1762..1763
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:34903463"
variation 1762
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:200739468"
variation 1800
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375459125"
variation 1805
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:140596381"
variation 1820
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184905686"
variation 1821
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148512517"
variation 1854
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377233845"
variation 1869
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202050152"
variation 1870..1871
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="a"
/db_xref="dbSNP:151052987"
variation 1891
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:376792729"
variation 1893
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:190792695"
variation 1929
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811013"
variation 1962
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147518221"
variation 2063
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299565"
variation 2064
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183938394"
variation 2079
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188834002"
variation 2132
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140372918"
variation 2146
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41310108"
variation 2147
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:193075321"
variation 2159
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811012"
variation 2229
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:75277108"
variation 2262
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811011"
variation 2267
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:183137974"
variation 2322
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:187145225"
variation 2351
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6700610"
variation 2540
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:41312690"
variation 2568
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:191916791"
variation 2768
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142123586"
variation 2870
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1140940"
variation 2889
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150705915"
variation 2899
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184219889"
variation 2954
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189281695"
variation 3029
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200424846"
variation 3029
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:3841008"
variation 3089
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192418098"
variation 3123
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3204955"
variation 3242
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:185557879"
variation 3361
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139030532"
variation 3391
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:117337677"
STS 3441..3632
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH26190"
/db_xref="UniSTS:84486"
variation 3471
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376483138"
variation 3473
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149888685"
STS 3495..3619
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75372"
/db_xref="UniSTS:59289"
variation 3498
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146512242"
variation 3534
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374184679"
variation 3587
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199831777"
variation 3594
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143344734"
variation 3595
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:3811010"
variation 3597
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:3811009"
variation 3618
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114033235"
variation 3620..3621
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="ta"
/db_xref="dbSNP:374697813"
variation 3728
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:190492027"
STS 3761..3948
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH102185"
/db_xref="UniSTS:96519"
variation 3774
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374222902"
variation 3855
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181543393"
variation 3889
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117021"
variation 3967
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184469057"
variation 4005
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376302608"
variation 4032
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375230119"
variation 4033
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146730302"
polyA_signal 4135..4140
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 4158
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 4175
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188964296"
variation 4182
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148944333"
variation 4197
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:12121158"
variation 4335
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299571"
variation 4382
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377292403"
variation 4427
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811008"
variation 4490
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:372511903"
variation 4520
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181039153"
variation 4711
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114921471"
variation 4869
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:10923204"
variation 4923
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:185557143"
variation 4969
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143712039"
variation 4996
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148126079"
variation 5003
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:114196858"
variation 5102
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374942113"
variation 5146
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190894422"
variation 5181
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732172"
variation 5182
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732170"
variation 5223
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:367988126"
variation 5225
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797707"
variation 5227
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797708"
variation 5230
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:181008715"
variation 5255
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140931431"
variation 5263
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:76160883"
variation 5342
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4839472"
variation 5368
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:78917287"
variation 5390
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117023"
variation 5444
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:187286147"
variation 5499
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146435279"
variation 5513
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1128100"
variation 5588
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:115376031"
variation 5605..5608
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="aaac"
/db_xref="dbSNP:144395099"
STS 5646..5840
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="D1S3610"
/db_xref="UniSTS:66759"
variation 5665
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:139328749"
STS 5735..5909
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH70098"
/db_xref="UniSTS:69412"
variation 5791
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192127758"
variation 5902
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183004818"
variation 5911
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:187382548"
polyA_signal 5915..5920
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5934
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:138659832"
polyA_site 5936
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5948
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:369489322"
variation 6060
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:112297385"
variation 6065
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190660373"
variation 6092
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147501140"
variation 6182
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:113030671"
variation 6193
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138485279"
variation 6258
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:149626166"
variation 6324
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034226"
variation 6350
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034228"
variation 6476
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:58002309"
variation 6575
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:182580560"
variation 6577
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:144489409"
variation 6598
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:370211174"
variation 6634
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:148437823"
variation 6776
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377056964"
variation 6799
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369257328"
variation 6854
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:117347999"
variation 6881
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188051509"
variation 7112
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034230"
variation 7113
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75064936"
variation 7126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:148451859"
variation 7132
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192672583"
variation 7174
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184529007"
variation 7214
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10494179"
variation 7268
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:189009112"
variation 7290
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:142497673"
variation 7312
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:192325588"
variation 7342..7345
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="actt"
/db_xref="dbSNP:111232035"
variation 7474
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374395998"
variation 7479
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:4348723"
variation 7563
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:145945936"
variation 7588
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371583408"
variation 7597
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10801933"
variation 7650
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:76569370"
variation 7654
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184708484"
variation 7687
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4548441"
variation 7702
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188827143"
variation 7841
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4595366"
variation 7872
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6428677"
variation 7974
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181588954"
variation 8045
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811007"
variation 8058
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:3811006"
variation 8083
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184820374"
variation 8162
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:139953261"
variation 8167
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:77318780"
variation 8259
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189697580"
variation 8289
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:7414259"
STS 8443..8624
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH99220"
/db_xref="UniSTS:85528"
variation 8455
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375912178"
variation 8567
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:17034249"
variation 8602..8603
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:5777244"
variation 8608..8609
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:369126863"
variation 8610..8611
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:67579944"
polyA_signal 8670..8675
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 8688
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
ORIGIN
aggaagcggaaagcagcagtgcagcggcggcggcggcggggctctgcctctccaggagcccagcgcaggccgcagagccggggccgctgtgagccgagaccgcgggccgcggagctcgggcggccggcgcggagaatttgttcctgttgaagagtggctcctcttctaatttccagactccttgaggttttaggagtctggtaggtgaaattttctacctctaaggagaaacagtacctgctccttcctcaagcgcaagccctccattgctatggataccgaatccacttattctggatattcttactattcaagtcattcgaaaaaatctcacagacaaggggaaagaactagagagagacacaagtcaccccggaataaagacggcagagggtcagaaaagtctgtcaccattcaacctcccactggagagcccctgttgggaaatgattctactcggacagaggaagttcaggatgacaactggggagagaccaccacggccatcacaggcacctcggagcacagcatatcccaagaggacattgccaggatcagcaaggacatggaggacagcgtggggctggattgcaaacgctacctgggcctcaccgtcgcctcttttcttggacttctagttttcctcacccctattgccttcatccttttacctccgatcctgtggagggatgagctggagccttgtggcacaatttgtgaggggctctttatctccatggcattcaaactcctcattctgctcatagggacctgggcactttttttccgcaagcggagagctgacatgccacgggtgtttgtgtttcgtgcccttttgttggtcctcatctttctctttgtggtttcctattggcttttttacggggtccgcattttggactctcgggaccggaattaccagggcattgtgcaatatgcagtctcccttgtggatgccctcctcttcatccattacctggccatcgtcctgctggagctcaggcagctgcagcccatgttcacgctgcaggtggtccgctccaccgatggcgagtcccgcttctacagcctgggacacctgagtatccagcgagcagcattggtggtcctagaaaattactacaaagatttcaccatctataacccaaacctcctaacagcctccaaattccgagcagccaagcatatggccgggctgaaagtctacaatgtagatggccccagtaacaatgccactggccagtcccgggccatgattgctgcagctgctcggcgcagggactcaagccacaacgagttgtattatgaagaggccgaacatgaacggcgagtaaagaagcggaaagcaaggctggtggttgcagtggaagaggccttcatccacattcagcgtctccaggctgaggagcagcagaaagccccaggggaggtgatggaccctagggaggccgcccaggccattttcccctccatggccagggctctccagaagtacctgcgcatcacccggcagcagaactaccacagcatggagagcatcctgcagcacctggccttctgcatcaccaacggcatgacccccaaggccttcctagaacggtacctcagtgcgggccccaccctgcaatatgacaaggaccgctggctctctacacagtggaggcttgtcagtgatgaggctgtgactaatggattacgggatggaattgtgttcgtccttaagtgcttggacttcagcctcgtagtcaatgtgaagaaaattccattcatcatactctctgaagagttcatagaccccaaatctcacaaatttgtccttcgcttacagtctgagacatccgtttaaaagttctatatttgtggctttattaaaaaaaaaagaaaaatatatagagagatatatatctatgccagaggggtgtcttttttaaaaattcttcttcattgctgactgaaactggcagatgattgaccagtatcctttgaccatctgcactttatttggaaggaagcaggggctgtccaccctgaaaaagagtgactgatgacatctgacttttgtcgatgggacttctcaagaagccattccttggagcttctgttacagctgtaaaccaaagtggagctggtgcttcttgggagcctcgccttacaactaattcctgcctttcgtccagtaccaagtcccccgttgcttctggtcagcccacttgtagacttccaggggacacatctttattctgtttcaggaaaccagtcacgacacgtccacatatgtatttgtgtatgttaatgtccagtatcacatcacccatgaaagtcgtgggcagttcaggagatacctgccttcatctttgttctttgttgccttaggttcttcagagaaagatcacaacaaaaaatgtacactgtcgtttacagctattaagtgatttgattttgtttttttcccaaagagaaaacctacctgccctgtttctgatcccacccctctgctggcttgaagcaggtaaccctttcccagccctgcagctgcccacctggcctccatgccatcctgcccccacctggctggcagccctggctctccatgtgtgccctccggctctgtgtgaagcctcaagtcagtcccagcattgtttccatagggaagtgtggggtgcccagcaggtaaagcacagggagagagggcagtgggaatgccacctttaggctgcagcaggagccccacactgcccagttttcctccccactgttctacaccaaccaggggagactaacactgtgactctgggattggcaggtgcaacttggagccacttaatttcctggggacgtaagttcttcccaagcttagagcaagctgccctgccaaaggagaccaaaccatgccaaccacgctggcaactgctgctgtccagtccctgtgttttctgaccaccgtcactgtgcaactcatcgcctctgccacttaggaccaggaaagaggctggttttgctcccactcttagttgctgataaagtggggagaaggaaaatggacactctacagagtttggggaagggagagtagggagcccatcttgtccagaaagattcatctgtggtctgtctgttaaacacagctgatttcagtgggctttcccctggccctgggggagcagacactgactgggttgtgggcagaggagccatcctggcggagccctgctgcaggggagctccttcaggagccccatccggacctcttgcactgggctgcctttgcctccatttgccttcctgtatctgcaacaaaccttttaaaagtgttcactcttgctttttccagtatttcggtaatcagccatcttgctgtagtacaggatgacattgtcgaatgctctttgtatgtgtgcacacccccttactcccttactgcttcatacactccacaagtggtacagtattttgtgtcattgtaaaaatcaaaattggctttggatctttgtaatacacctgtacctgaaaaagtaaacaacattcttcaattactagccttcagcttgaaaagacatgctggagaagaaggaagggggaacccataggtgtggcgtggagccaagatgtactattcaactatgtgtttctgtttataaaaaacacataccatggaaccatggtgcttttgttcttagtttttgccgttagatcccttcaaactggaagttccttacaatatctttctcaggaaatattttgggaaatggggtaagagatggcaagtgtgagacgggctgtgtcagaggttgctacgtcatggatacagtgcagttccaagtgccataagtgtatgtacatatagttaataatgacactgttcatcaccattctaaaatactgttcttccaaccctatcttcaatgaccagtccagaaggggttaagctggattcatttgctctggcatgtgcattcccagcagggtgaagaaaggtttaaattaaagaatttattttctctctcccccttcctctttctcccagtctttgcataggagaatgttagacattcagaaattactgtttctgttttaaattgagtattgatttttttatattgactttgtattgagttctttttgaaagaataacaaaataaaatgcaggatctttgtaaagcctttgcactttcaacctctttatagcttgagttacttttgcagtgggaacaatgtaaatgacatttaaaagatttaaggtttcagaaagctgcatcccacaattgaacacaatgcatttttatttcaattcttggaactggtaggctattctttttaaaagggggtaaacttcgccctaaggctggtagaatgtatgttcacattatagtagacaggatttcatttgccttatatgtttatagattttttataattttcatcctacgttattaaaattagagcattgagtgttaaagaacttaatgaggagtctatatctgagattgctctcttccctggtgatgttttaactggtagataatttgttcttaaatatgtacttttgaagataggacagtttttatagtccatgaactgaatgttaaaaagttctgtatgcattctcagagaggattttaaagctatatagttcatccatcctttgcattatcaaaatgttaagtcaaatctgtaatactttggctaaaattcataaagtaagccctagagaaaatacttgaccaccaaatttttgcccaactatcatcacctcccttcccccgcctctgttcttgccttttgacatctacatggaagacaagttctttacagcaaatggtaagaggcaggtgacctggtgtgtttgctgtgttgtagttcattgcctggggcttgggactccttttttaatggagagactagctgtgcaggtgtgtgttggatagggataaagtgctcacccctgccctctctacagtagttggtggtagatttctctctcattttgcctcataatcactttcgagtgcatgtatttacctaagggctgtagctctgtgggatgctaccagcatattggactgacagaaattgattaccttgccactccaacctacgtactgagtgagtgctccagccactcagtgaaaccaacaaaagtgagtccttggtttaccttccaatctgggtcctgctgtgtaagtatccctaagtggggatgcatatttgtttgtgcgtttttatttccatatatgtgagcatttctctgagtgtattaccagacggatagcacatttatatgtcagacatcttaacatctgtgttatctgtagcaggtgtgtagctcagcagatacgtgtcattgtgtatatagctgagtgtgtgagggtgtctgtgtttctgcagtcccctgtgtttgagagatgacttaataaccctgtgttttgagaggtcgctctaaaccagtgacttttccctcccctgctttattcctttccctcactgacactggcttctcccgctagagtaaatggctttagcacagcactgtcttctggggagcctgctgtcctgcaggcaagtccattaaactctttcttgctttaggactctgaaaacagcaagaaacaaacaaacaaaggtcaagctctaagaaaattactgctcaaacttcactaccctggaagccttactagatatttcttaaggtaacttaaaaattgggctttatttttaaaaagtgataggttacttacagtagcacagaaatgttagcatatttatttaaatagtcctgcagcagagaccctgcgattgtaaagtgatttaagtatttctgggtagtgtttgtgatttacggatttgttactgaaaaacaaaaaaatcactactgtgaatttactactatgtaaccttgtggtcgtatttcattataaataaaataagaattgctcttctgcccaccgttcttgattggtattcagtgcagtagcgaaatgagatagtttagacactgttgaaataactgcattgagctttaaccaagtgtatgctcagaaaattcagttttggatcacattttgacaaaacatgttttggtcaaagaaaggaaaggctactaacacatttatcaggtaatgtatgtcacagtccgtgttccacccagccttgttatccccacattctttcaagataggagtcatcttggtttttcgggtgaaaaacggaaggtcagagaggaaggggcttgtccaaggtctcatgtctggttaacagaatttcaaactagatgtttgattctaacccctcagtccactgtaccttgaagtatggtctaaatgattcggcacttctggatgttgaggaaggacctagagacacatccttgaactagaacctggggtgagagttcattgggaggcaggatctcttctttcactttggatttacaccttgtcccttggaaagcttctccactatgctagcaaatatcttaggatatttgatggaaagaacttgagaatcccttctggaaaacccagcctttcagtgttaacacctgctgcaagacagggatgctgttgttctggcagcccccctttgcttttgcctggccccaccttctgctcccactctgctggcttgggcaagatgcgtgccttgggccttgggtgcagggaggcaggcaggggcttgacctggcctctctctggtgccatggcaacattatgccccaaacttcttccctggttggagtgagaggggctgtccacagccccatcctgtggggatctcaagccggagtccctggcctggcctccttgacgtaggtgttctcagcaagcagtttgcatcccaccgtctttctcacacttgcccccaagacttttgacagagcagacgtaaaacaggactcagaaaaccatttttctctgttcccatatgtagtaagttttgattcagttgtgcataaaccatagttttctgccctgctgtttgctttcaatggaagacagtaaagggaagatggtgctcacatctctccatgtgacatctcattaggaattaagatgcgatggattagaaatgtaaaacttcagaataaaattaaatttcagggctctataagtcccgttttcccaggtcctgttccgtttctacgtagataacccaatttgttttgtctatgaaataagcctctttagtgggttgttttagtctctccaacaaaagagcagattcctaaagccaggtgcagcactgtgaaaagtttctttcaatatggcaccaagactctaccatttatgtctctctcagcttacaaacatcagcgttttgtccttgtcatagtggaagaaagacacttactttaagctttggggacaaaggtgacaaaccccaggcttttatcttaaaagtgtctttggcacttcttttggcactgaaatggtatttgggaagcattatttgaatgtacagttgtttggttttgtatgtgcttatctttatctgagctttcacttgtagacatggccttttgttgtgaagttgctcatcatttaggagtgtttaattctaaaaagccttcagcctaagaaagcttcatctgtggggaccagagacttgttgctcagggagttagtgatgggacttgggcatctgatctgcaggtgacaagtttagttcaactgaagttgtagggaatttagacagttgcacatcattgccgttctaggggccttgtagaaagatgaaacagttgtttttcatttaccagcacctctcagttatagaggtaatggaacattcgcttacttttcatcatcattctttaaaaagggaacatacaaaaatctaaactatggcaataatttatttttataatagtttacggtaggctttaattaaatggcaaactcctctgggacccctaagttatggcgtgattagccaaatttgatttccaacagtcatttatggccataactattgcatagagtgcaggatgccagcaaagatgagggtgggggcagatactggctcagtgatttaactcacattatagatgaccccttcctcaacagaaatgctactgagagaaccagagaggcctgggccaggcaggtcttatttgagaggagattatttgataattgctttggttagaaggactttacatttcctgatttcaagtccagcaccaatttagaaagttcagagatgaaaccacctgtctttacctgacagagtcataacggtttgtgtaaaaatgtggtcagggaccttttttgttctttctgattagttaatactgtacattgtaaccaggaggggcagttttgccaaccagcctctgctcatggtcaccatatgtgtatgacaaggcctgagtgagttcctgcataaactgggtagtgggctcttttgacacatttgcaagcatgtaaatgaatgaatgacactaccagcaaccatctgtacaggtccatttacttacattcataaggtttatgctatgaaacttcttctcattgtgatgtcagtaacagagttagtgtctctgatggaatagtgtacctgtcacccaagttattttgttcctttttgggtcctccagtataatccccccctcatcccaattaactgtaaaatgttttacacatcacattttttatactgtaaacttggaaaataaactgaaatatcaaattg
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:81839 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:81839 -> Biological process: GO:0007275 [multicellular organismal development] evidence: IEA
GeneID:81839 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
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