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2019-03-20 11:56:58, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_033326               8865 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens SRY (sex determining region Y)-box 6 (SOX6),
            transcript variant 2, mRNA.
ACCESSION   NM_033326
VERSION     NM_033326.3  GI:224967047
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 8865)
  AUTHORS   O'Donnell,P.H., Stark,A.L., Gamazon,E.R., Wheeler,H.E.,
            McIlwee,B.E., Gorsic,L., Im,H.K., Huang,R.S., Cox,N.J. and
            Dolan,M.E.
  TITLE     Identification of novel germline polymorphisms governing
            capecitabine sensitivity
  JOURNAL   Cancer 118 (16), 4063-4073 (2012)
   PUBMED   22864933
REFERENCE   2  (bases 1 to 8865)
  AUTHORS   Yamashita,S., Miyaki,S., Kato,Y., Yokoyama,S., Sato,T.,
            Barrionuevo,F., Akiyama,H., Scherer,G., Takada,S. and Asahara,H.
  TITLE     L-Sox5 and Sox6 proteins enhance chondrogenic miR-140 microRNA
            expression by strengthening dimeric Sox9 activity
  JOURNAL   J. Biol. Chem. 287 (26), 22206-22215 (2012)
   PUBMED   22547066
  REMARK    GeneRIF: L-Sox5 and Sox6 proteins enhance chondrogenic miR-140
            microRNA expression by strengthening dimeric Sox9 activity
REFERENCE   3  (bases 1 to 8865)
  AUTHORS   Estrada,K., Styrkarsdottir,U., Evangelou,E., Hsu,Y.H., Duncan,E.L.,
            Ntzani,E.E., Oei,L., Albagha,O.M., Amin,N., Kemp,J.P., Koller,D.L.,
            Li,G., Liu,C.T., Minster,R.L., Moayyeri,A., Vandenput,L.,
            Willner,D., Xiao,S.M., Yerges-Armstrong,L.M., Zheng,H.F.,
            Alonso,N., Eriksson,J., Kammerer,C.M., Kaptoge,S.K., Leo,P.J.,
            Thorleifsson,G., Wilson,S.G., Wilson,J.F., Aalto,V., Alen,M.,
            Aragaki,A.K., Aspelund,T., Center,J.R., Dailiana,Z., Duggan,D.J.,
            Garcia,M., Garcia-Giralt,N., Giroux,S., Hallmans,G., Hocking,L.J.,
            Husted,L.B., Jameson,K.A., Khusainova,R., Kim,G.S., Kooperberg,C.,
            Koromila,T., Kruk,M., Laaksonen,M., Lacroix,A.Z., Lee,S.H.,
            Leung,P.C., Lewis,J.R., Masi,L., Mencej-Bedrac,S., Nguyen,T.V.,
            Nogues,X., Patel,M.S., Prezelj,J., Rose,L.M., Scollen,S.,
            Siggeirsdottir,K., Smith,A.V., Svensson,O., Trompet,S., Trummer,O.,
            van Schoor,N.M., Woo,J., Zhu,K., Balcells,S., Brandi,M.L.,
            Buckley,B.M., Cheng,S., Christiansen,C., Cooper,C., Dedoussis,G.,
            Ford,I., Frost,M., Goltzman,D., Gonzalez-Macias,J., Kahonen,M.,
            Karlsson,M., Khusnutdinova,E., Koh,J.M., Kollia,P., Langdahl,B.L.,
            Leslie,W.D., Lips,P., Ljunggren,O., Lorenc,R.S., Marc,J.,
            Mellstrom,D., Obermayer-Pietsch,B., Olmos,J.M.,
            Pettersson-Kymmer,U., Reid,D.M., Riancho,J.A., Ridker,P.M.,
            Rousseau,F., Slagboom,P.E., Tang,N.L., Urreizti,R., Van Hul,W.,
            Viikari,J., Zarrabeitia,M.T., Aulchenko,Y.S.,
            Castano-Betancourt,M., Grundberg,E., Herrera,L., Ingvarsson,T.,
            Johannsdottir,H., Kwan,T., Li,R., Luben,R., Medina-Gomez,C.,
            Palsson,S.T., Reppe,S., Rotter,J.I., Sigurdsson,G., van Meurs,J.B.,
            Verlaan,D., Williams,F.M., Wood,A.R., Zhou,Y., Gautvik,K.M.,
            Pastinen,T., Raychaudhuri,S., Cauley,J.A., Chasman,D.I.,
            Clark,G.R., Cummings,S.R., Danoy,P., Dennison,E.M., Eastell,R.,
            Eisman,J.A., Gudnason,V., Hofman,A., Jackson,R.D., Jones,G.,
            Jukema,J.W., Khaw,K.T., Lehtimaki,T., Liu,Y., Lorentzon,M.,
            McCloskey,E., Mitchell,B.D., Nandakumar,K., Nicholson,G.C.,
            Oostra,B.A., Peacock,M., Pols,H.A., Prince,R.L., Raitakari,O.,
            Reid,I.R., Robbins,J., Sambrook,P.N., Sham,P.C., Shuldiner,A.R.,
            Tylavsky,F.A., van Duijn,C.M., Wareham,N.J., Cupples,L.A.,
            Econs,M.J., Evans,D.M., Harris,T.B., Kung,A.W., Psaty,B.M.,
            Reeve,J., Spector,T.D., Streeten,E.A., Zillikens,M.C.,
            Thorsteinsdottir,U., Ohlsson,C., Karasik,D., Richards,J.B.,
            Brown,M.A., Stefansson,K., Uitterlinden,A.G., Ralston,S.H.,
            Ioannidis,J.P., Kiel,D.P. and Rivadeneira,F.
  TITLE     Genome-wide meta-analysis identifies 56 bone mineral density loci
            and reveals 14 loci associated with risk of fracture
  JOURNAL   Nat. Genet. 44 (5), 491-501 (2012)
   PUBMED   22504420
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 8865)
  AUTHORS   Yang,T.L., Guo,Y., Liu,Y.J., Shen,H., Liu,Y.Z., Lei,S.F., Li,J.,
            Tian,Q. and Deng,H.W.
  TITLE     Genetic variants in the SOX6 gene are associated with bone mineral
            density in both Caucasian and Chinese populations
  JOURNAL   Osteoporos Int 23 (2), 781-787 (2012)
   PUBMED   21625884
  REMARK    GeneRIF: Genetic variants in the SOX6 gene are associated with bone
            mineral density in both Caucasian and Chinese populations
REFERENCE   5  (bases 1 to 8865)
  AUTHORS   Lee,J.S. and Im,G.I.
  TITLE     SOX trio decrease in the articular cartilage with the advancement
            of osteoarthritis
  JOURNAL   Connect. Tissue Res. 52 (6), 496-502 (2011)
   PUBMED   21728837
  REMARK    GeneRIF: SOX trio gene and protein decreased with advancement of
            osteoarthritis in human articular cartilage.
REFERENCE   6  (bases 1 to 8865)
  AUTHORS   Ueda,R., Iizuka,Y., Yoshida,K., Kawase,T., Kawakami,Y. and Toda,M.
  TITLE     Identification of a human glioma antigen, SOX6, recognized by
            patients' sera
  JOURNAL   Oncogene 23 (7), 1420-1427 (2004)
   PUBMED   14691456
REFERENCE   7  (bases 1 to 8865)
  AUTHORS   Cohen-Barak,O., Hagiwara,N., Arlt,M.F., Horton,J.P. and
            Brilliant,M.H.
  TITLE     Cloning, characterization and chromosome mapping of the human SOX6
            gene
  JOURNAL   Gene 265 (1-2), 157-164 (2001)
   PUBMED   11255018
REFERENCE   8  (bases 1 to 8865)
  AUTHORS   Simpson,J.C., Wellenreuther,R., Poustka,A., Pepperkok,R. and
            Wiemann,S.
  TITLE     Systematic subcellular localization of novel proteins identified by
            large-scale cDNA sequencing
  JOURNAL   EMBO Rep. 1 (3), 287-292 (2000)
   PUBMED   11256614
REFERENCE   9  (bases 1 to 8865)
  AUTHORS   Hagiwara,N., Klewer,S.E., Samson,R.A., Erickson,D.T., Lyon,M.F. and
            Brilliant,M.H.
  TITLE     Sox6 is a candidate gene for p100H myopathy, heart block, and
            sudden neonatal death
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (8), 4180-4185 (2000)
   PUBMED   10760285
REFERENCE   10 (bases 1 to 8865)
  AUTHORS   Denny,P., Swift,S., Brand,N., Dabhade,N., Barton,P. and Ashworth,A.
  TITLE     A conserved family of genes related to the testis determining gene,
            SRY
  JOURNAL   Nucleic Acids Res. 20 (11), 2887 (1992)
   PUBMED   1614875
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AK097455.1, AF309034.1,
            AC103794.2 and AC009869.7.
            This sequence is a reference standard in the RefSeqGene project.
            On Mar 13, 2009 this sequence version replaced gi:71037388.
            
            Summary: This gene encodes a member of the D subfamily of sex
            determining region y-related transcription factors that are
            characterized by a conserved DNA-binding domain termed the high
            mobility group box and by their ability to bind the minor groove of
            DNA. The encoded protein is a transcriptional activator that is
            required for normal development of the central nervous system,
            chondrogenesis and maintenance of cardiac and skeletal muscle
            cells. The encoded protein interacts with other family members to
            cooperatively activate gene expression. Alternative splicing
            results in multiple transcript variants.[provided by RefSeq, Mar
            2009].
            
            Transcript Variant: This variant (2) differs in the 5' UTR and
            coding region and initiates translation at an alternate start
            codon, compared to variant 1. The encoded isoform (2) has a
            distinct N-terminus and is longer than isoform 1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF309034.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025081, ERS025082 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-17                AK097455.1         610-626
            18-1066             AF309034.1         1-1049
            1067-1067           AC103794.2         115165-115165       c
            1068-2601           AF309034.1         1051-2584
            2602-8865           AC009869.7         10392-16655
FEATURES             Location/Qualifiers
     source          1..8865
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11p15.3"
     gene            1..8865
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /note="SRY (sex determining region Y)-box 6"
                     /db_xref="GeneID:55553"
                     /db_xref="HGNC:16421"
                     /db_xref="MIM:607257"
     exon            1..74
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    34..36
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /note="upstream in-frame stop codon"
     exon            75..315
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     CDS             79..2505
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /note="isoform 2 is encoded by transcript variant 2;
                     SRY-box containing gene 6; transcription factor SOX-6"
                     /codon_start=1
                     /product="transcription factor SOX-6 isoform 2"
                     /protein_id="NP_201583.2"
                     /db_xref="GI:71037389"
                     /db_xref="CCDS:CCDS7821.1"
                     /db_xref="GeneID:55553"
                     /db_xref="HGNC:16421"
                     /db_xref="MIM:607257"
                     /translation="
MSSKQATSPFACAADGEDAMTQDLTSREKEEGSDQHVASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSRDREIMTSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINQRLKGLSDRFGRNLDTFEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGTVSPTGIKNEKRGTSPVTQVKDEAAAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQPHGVDGKLSSINNMGLNSCRNEKERTRFENLGPQLTGKSNEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKTDGGSLAGNEMINGEDEMEMYDDYEDDPKSDYSSENEAPEAVSAN
"
     misc_feature    1288..1290
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sumoylation site; modified site"
                     /db_xref="HPRD:04332"
     misc_feature    1288..1290
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sumoylation site; modified site"
                     /db_xref="HPRD:03754"
     misc_feature    1327..1329
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sumoylation site; modified site"
                     /db_xref="HPRD:04332"
     misc_feature    1327..1329
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sumoylation site; modified site"
                     /db_xref="HPRD:03754"
     misc_feature    1876..2067
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /note="SOX-TCF_HMG-box, class I member of the HMG-box
                     superfamily of DNA-binding proteins. These proteins
                     contain a single HMG box, and bind the minor groove of DNA
                     in a highly sequence-specific manner. Members include SRY
                     and its homologs in insects and...; Region:
                     SOX-TCF_HMG-box; cd01388"
                     /db_xref="CDD:28966"
     misc_feature    order(1885..1887,1891..1896,1900..1905,1912..1917,
                     1924..1926,1936..1938,1960..1962,1975..1977,1984..1986,
                     1993..1995,2050..2052)
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28966"
     exon            316..523
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            524..613
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            614..786
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            787..855
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            856..976
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            977..1056
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            1057..1179
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     STS             1100..1235
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="Sox6"
                     /db_xref="UniSTS:536442"
     exon            1180..1329
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     variation       1213
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:36071533"
     exon            1330..1513
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            1514..1701
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            1702..1810
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            1811..1984
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     exon            1985..2201
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     variation       2013
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34438327"
     exon            2202..8865
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /inference="alignment:Splign:1.39.8"
     variation       2400
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:34449532"
     STS             2488..2650
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="Sox6"
                     /db_xref="UniSTS:144491"
     polyA_signal    2568..2573
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
     polyA_site      2604
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
     STS             2829..3641
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="SOX6_844"
                     /db_xref="UniSTS:277764"
     STS             3540..3623
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="RH94315"
                     /db_xref="UniSTS:85843"
     STS             6080..6213
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="WI-17844"
                     /db_xref="UniSTS:52420"
     variation       7510
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1065024"
     variation       7701
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1065025"
     STS             7934..8063
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
                     /standard_name="RH65285"
                     /db_xref="UniSTS:46963"
     polyA_signal    8841..8846
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
     polyA_site      8865
                     /gene="SOX6"
                     /gene_synonym="HSSOX6; SOXD"
ORIGIN      
gtcactttcatgaattcaaaggcaatttaccagtgatttctgggtgctggggctgatattttttgtgcatatttaagaatgtcttccaagcaagccacctctccatttgcctgtgcagctgatggagaggatgcaatgacccaggatttaacctcaagggaaaaggaagagggcagtgatcaacatgtggcctcccatctgcctctgcaccccataatgcacaacaaacctcactctgaggagctaccaacacttgtcagtaccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggaatcagagaataataagttatgttccctatattccttccgaaatacctctacctcaccacataagcctgacgaagggagtcgggaccgtgagataatgaccagtgttacttttggaaccccagagcgccgcaaagggagtcttgccgatgtggtggacacactgaaacagaagaagcttgaggaaatgactcggactgaacaagaggattcctcctgcatggaaaaactactttcaaaagattggaaggaaaaaatggaaagactaaataccagtgaacttcttggagaaattaaaggtacacctgagagcctggcagaaaaagaacggcagctctccaccatgattacccagctgatcagtttacgggagcagctactggcagcgcatgatgaacagaaaaaactggcagcgtcacaaattgagaaacaacggcagcaaatggaccttgctcgccaacagcaagaacagattgcgagacaacagcagcaacttctgcaacagcagcacaaaattaatctcctgcagcaacagatccaggttcagggtcacatgcctccgctcatgatcccaatttttccacatgaccagcggactctggcagcagctgctgctgcccaacagggattcctcttcccccctggaataacatacaaaccaggtgataactaccccgtacagttcattccatcaacaatggcagctgctgctgcttctggactcagccctttacagctccagaagggtcatgtctcccacccacaaattaaccaaaggctaaagggcctaagtgaccgttttggcaggaatttggacacctttgaacatggtggtggccactcttacaaccacaaacagattgagcagctctatgccgctcagctggccagcatgcaggtgtcacctggagcaaagatgccatcaactccacagccaccaaacacagcagggacggtctcacctactgggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaagcagcagcacagcctctgaatctctcatcccgacccaagacagcagagcctgtaaagtccccaacgtctcccacccagaacctcttcccagccagcaaaaccagccctgtcaatctgccaaacaaaagcagcatccctagccccattggaggaagcctgggaagaggatcctctttagatatcctatctagtctcaactcccctgccctttttggggatcaggatacagtgatgaaagccattcaggaggcgcggaagatgcgagagcagatccagcgggagcaacagcagcaacagccacatggtgttgacgggaaactgtcctccataaataatatggggctgaacagctgcaggaatgaaaaggaaagaacgcgctttgagaatttggggccccagttaacgggaaagtcaaatgaagatggaaaactgggcccaggtgtcatcgaccttactcggccagaagatgcagagggaggtgccactgtggctgaagcacgagtctacagggacgcccgcggccgtgccagcagcgagccacacattaagcgaccaatgaatgcattcatggtttgggcaaaggatgagaggagaaaaatccttcaggccttccccgacatgcataactccaacattagcaaaatcttaggatctcgctggaaatcaatgtccaaccaggagaagcaaccttattatgaagagcaggcccggctaagcaagatccacttagagaagtacccaaactataaatacaaaccccgaccgaaacgcacctgcattgttgatggcaaaaagcttcggattggggagtataagcaactgatgaggtctcggagacaggagatgaggcagttctttactgtggggcaacagcctcagattccaatcaccacaggaacaggtgttgtgtatcctggtgctatcactatggcaactaccacaccatcgcctcagatgacatctgactgctctagcacctcggccagcccggagcccagcctcccggtcatccagagcacttatggtatgaagacagatggcggaagcctagctggaaatgaaatgatcaatggagaggatgaaatggaaatgtatgatgactatgaagatgaccccaaatcagactatagcagtgaaaatgaagccccggaggctgtcagtgccaactgaggagtttttgtttgctgaattaaagtactctgacatttcacccccctccccaacaaagagttattaaagagcccgcatgcatttgtggctccacaattacatcagcagaatggtcttaattgtttcgtaaagtgtgagacagattaagttttccctgatttttcatgaacttgagttttttgttgttattgttattgttgttgttgttgtttttttaatttaggtgaagacatattaaatatgagacaccaggacttgaaacttatctcaacccgtagatgtcttacaagtcttatatttttgtcttactttttttttcttttggatgttgataaaggtttaagttactgttttagatggggttaaacattctcactcaggtatgctgtgccggcctacaggttgtgaatgtgtttttattctgaattattttagaaaacaactgaggatttcatattgtgaaacagaacaagtccacggcgtgtgcagctgcatgtagagcatattcaaaaggcctcggaattccaattttccatttgtagagttaaactttgaatgtgccaaactttttcgtaacttttgaatcttaatattttgaaagtcttaaaggagacactgcaaagtcttagacaatctttggcatcttaaaataaaatagcaaaccaacatttttttttccagaaaatggtaaggtactcaggaatctggagacaagatattgtaaggaatgaacaaggttgccacagtgcatggacccaattgtgtttgcctgttgacgtgccatcagtgcgtgatgtggtatgacatacacacaccagagcaaccgccacaccagatatcgacagagtggtcttctctgcctgagaccacctctcactacatccattatccctttgcctttaaccctgacattcagtcttaacacattttatcttaaataatttattcattccagaatgtcaagggtccacttgctatttattttttttcaattgttggtggcattaatttaataattcttgtttttcaccttccttccccgaagaacttttccgtccttttcacctccttctcctgtgtacatagtgattttatgtccccagaacgcctggaagcatttctgaaaccaagatattattaaaaacctattattgtttttaatcatgagtatgtatctggctgcagggctgtgtattgggatataggtatatagtcttacacttaaacaggtatgcccctgaggttcactgtgacctcaagtcttttgccagaattttcccctaattcagttcacaagtggtagggtctgcatcagtggcatttccccctgaattccattcagcagcaaggttcaacagtggtgactgccaggcaggagagtcctgcggccaaacctgaagcccaaggctcgtgggccatgcaggaatctcagtgaagctgtcatgggctggcacctttacactgagttgccttgtcccagctggcacatctagggagttcattgcaaaatccccaggatgcaaaaagccacatgacagcctcagagcaaagatggtggcaaatagtcatgatacatctagagaatgaaagaaaactgtaagggaggagaaggaggggaatacattccctatatgggatgttcctactgttaactctggggaacagatagctccgggggcagcagatgagttcctctggctgactctatctgtagccacatggggacctgcctacgtgtgaacaaaatgaactgcacttatcacacaaggatttctttgaagacatgctactggggtgggaagcagtgaggttttattccccatctcctaactacagggagctctgccatgtcattttggccttcctgaaactaggacaggttgtctatcggggggcttcccccagagaggtttagtgggagaatgtcagtgaatgggatagttcacctcatgggacaacccagaatctgatcaccaggacataggaatggccccatcagatttcttgagccattttgtcacttggaagaaaatagtgtacctttgtatttatttaagagtgctcaaggcctaatagcaataaacaggtctagccaagaaattacaagctattctgttagctgggagtgctctctataagctgattaaggtactgataggaactctttgttattcatgttggttggggattagaaatttgtttttgtacatttatttcaaatgaggaggaggtcattttttctctcaaaaaatgagtatttattattgtcttactgatttctttgattatatacctctcctcctcagttcactcttgttttttttctttctctttggcttttgcttttgctctctctcacttctttcttattttgttgcattggtagagtgttgtatggctagcattgtattgtatgtaattaattttgcacaaaagcaaacatttagcatagtaggttaattttgtttgtttttatgaccatgccaaaataatattctgggctggtggagaacaaaggactgttctttaggactgaaacttgattttgctcatagtaagtaaaaaaaaacaaaaaacacacacactcacagatgttgtttcgtaagtgttataagcactggatataaatggtattttttatcacttctgactaatgtgaaactgttgtacgaaaactacatgaacaaaagtcatctgtttcgactcgtgtgggcttgcctcacagttgccggatttgagtcatttttatgtcttgttatttcatttatttatgcaaaatacatgtgtgtatgaacactttgttttagctccagctctgcctcagtactggggttcatttacttttagccatgttcttaaaaatgaaaggctattcaggaatgatctgattgtaaacgtctttttcattggatcaaacagtaatgctgtatttgaatctaaattttgtgtataagcagtttatttattagccaagtttggctctaaatatccatggaaattaagaatgacaatcatagggatcaattcattttattttcagtggggcttaaacaaagtttatatgactttaccatctcattttagatttttctaattgtgtaaatataacatagaaatagaatttatttttggttcatgaatacttagtgagatataagttatgtatttcctttttgttctctatccatagatgttggtccaaactgaaagttgatgagtcactgtgcctctcggggtagtgagttatcagctacagtgagagagcagtgtttggcctgcagctgggacagcaaaacgtttcaccagggttctcatgcagttcagaacccactgtccacagatccagacatttcccttttttcttacagaaagttgatgattggacatactaaatttccactacagttaggagacagtcagtttgctttgggagtctacataaatcttctaagatagttctgtgaccatttaatagcaagaagcatgaatgccactacaaaggcaaaaatccacctctgagatcggccgttaataaacgtcccgtcatgtcagtttagattcaagaatgttaagcaactttgtttttgcggtgctccctatttcatagtatcttcaaatcaaaaataaaaattatctccattttgttaaagaacttacagggtcagggttctccttgtcacttagaattgggacactgccaggcaatcctctcccaaaaaaaaaaaaaaaaaaaaatagccatatggaatggaaggaaaaggagaaaagaaggaagaaaggaaaaaagtaggaagggagagagaaaaaaaaggtcgctttgcggatacgagccgctaggctgacaacttttctatttcattggcagatatgaagcagtgtcttttccagtaaggtacggaagctttgttgttttcatgtgtacccagctcagccttttagaagcacctcggtttgcttcattaggtatttgatactctccagccttgtcctcaggcctgatttgatttgccagggtcctgacaccaaagcccaggccaagttctaaattcaggtgtgggctcacagtgctattgagcttgtcgaattctggcctcccctgaacattagccccacgggagcctgagggtgtttgaaaagggcgtgatcactctagggctgaaattaaaggctgctttcttttccttctgaagccaggctgcttcttcggagtacaccctcctgagccaggagcacaagcactagcagaaagcagggattgtttcaggaaagcccatttaccctcagtaggaaggcagcctggtcacttgaacagcacagctgaggctgcttctctcaatttactcattttgcaaagaattgacctctaccaactcattagggagaggaaaaagaatcacttagtaattttaaatcatatgagaagtcctgtaccaagtgccaacaactgcaaagaaatgcagctagaggaatgtattgaaattactactgggtcttcctttttaatgagaaaatgacaaaaatggttgctgtagccctgcctgattttgtacacgtttgtctaagaattgagttggcacttaagctcacttctcaaagtataataatattgtatgacctcatttgtcctttcacaaaagcacttgcatcatttccttaagtcatctgctccctgacatgttttcttccctaataaacaacttctgtctgttattcctgccaatgatgttctgtttctgatgccatatcctattgagcgtgcccctgtactaatatcattgaaaatattgatatgcaaacacatttccttttcatccccattctatctttccctttggggacagattgctttccaaaagctcatgaacaaatatttggaatgctggtacctttggggcagaggtaagggtgggcggggtgggggcagaaaggtaatgcttaatgcagataactcttctaatcagtgtccatggcaatatgaacgcttgaagaaaactcagtgacatatcttgctcagtagtttcttattcctgaagaaccacaagcataaagtgaggcctcagtgctggtgctcttggagtatggggaatgtgcaaatatttaactgttttgtatgctgcacattgcaggtctgctcatgtgcattctccctttgtcttcctttgtcatatgtgtttttgcttttttgaaagtgcagtctttattgtaccctcctccagcttgtagcaaattagaatgcttagcatttatgttcattcattattgtatttgccatgtaaaatttttattaccttagacaagcttataagctgttactacataacttatcttactgtaactcttttatttcccccgacgttgtaatttgtttgtgatgtatattgtgaaattgtattctatgttaatttaatcagcacaattcactgacatgctggactgacatgctggctgctgtttcaaagtgtaaagtttgtgtagggctgttgggacaactgcaactctgttgtcaaggtactgtgctttggttcctatagcaacactgggtgtggcccttgaattgctaagggcatttaatacatcctggagcaaattttaactgcagattttctttgtagaaattctatgtataatgcaggtacctacttggcccatggctggtaactatttgggcaattagaaaaaaagaaaaaaacataaaaactagtgtctattgctgctttgaatatgtttgaaagtctgaaaatgtaaatagtttatcaaaaaaaaatcttgtacagtccagtgtaaagtttttaaatgaccttaagggttgccatcacatctttctcacactctcctcttgataataataataataaaaagtttgctaaggattaaagaaatgggaaaaataaaaaaaatctcttcaaatttacaggaatgaatcattgttcttagctttgttgcatacacaaacttcttggattttgttgtgcagtattgacgtgagataaagctcaacattgaataatctttcagtggtacttttcaaagtcttcccctcctctgcctcataattaagggaaaagacaaaattgaaagacacactgtctttatctatcctggtgtatgttggcaccttagctactttttttttttcctttttgcacaaggtgctttcctgatatgttcaacatgccatctttgggtgataatgtatatgccgtgatggggctcaggccccttaggggagtgtctataagaactgcctatttatgctcatttacctcaagactgtcctctctaccctaatctagttgtcatcactccatcttttgtactgctgttgacacttacaaattaaagataaattttgttttatga
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:55553 -> Molecular function: GO:0003677 [DNA binding] evidence: NAS
            GeneID:55553 -> Molecular function: GO:0003700 [sequence-specific DNA binding transcription factor activity] evidence: NAS
            GeneID:55553 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
            GeneID:55553 -> Molecular function: GO:0043565 [sequence-specific DNA binding] evidence: IEA
            GeneID:55553 -> Molecular function: GO:0044212 [transcription regulatory region DNA binding] evidence: IEA
            GeneID:55553 -> Molecular function: GO:0046982 [protein heterodimerization activity] evidence: IEA
            GeneID:55553 -> Biological process: GO:0000122 [negative regulation of transcription from RNA polymerase II promoter] evidence: IEA
            GeneID:55553 -> Biological process: GO:0000902 [cell morphogenesis] evidence: IEA
            GeneID:55553 -> Biological process: GO:0001701 [in utero embryonic development] evidence: IEA
            GeneID:55553 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: IEA
            GeneID:55553 -> Biological process: GO:0006355 [regulation of transcription, DNA-dependent] evidence: NAS
            GeneID:55553 -> Biological process: GO:0007517 [muscle organ development] evidence: NAS
            GeneID:55553 -> Biological process: GO:0009791 [post-embryonic development] evidence: IEA
            GeneID:55553 -> Biological process: GO:0016458 [gene silencing] evidence: IEA
            GeneID:55553 -> Biological process: GO:0021778 [oligodendrocyte cell fate specification] evidence: IEA
            GeneID:55553 -> Biological process: GO:0032332 [positive regulation of chondrocyte differentiation] evidence: IDA
            GeneID:55553 -> Biological process: GO:0035051 [cardiocyte differentiation] evidence: IEA
            GeneID:55553 -> Biological process: GO:0042692 [muscle cell differentiation] evidence: IEA
            GeneID:55553 -> Biological process: GO:0045944 [positive regulation of transcription from RNA polymerase II promoter] evidence: IEA
            GeneID:55553 -> Biological process: GO:0048821 [erythrocyte development] evidence: IEA
            GeneID:55553 -> Biological process: GO:0051216 [cartilage development] evidence: IEA
            GeneID:55553 -> Biological process: GO:0061036 [positive regulation of cartilage development] evidence: IDA
            GeneID:55553 -> Biological process: GO:0071560 [cellular response to transforming growth factor beta stimulus] evidence: IDA
            GeneID:55553 -> Biological process: GO:2000741 [positive regulation of mesenchymal stem cell differentiation] evidence: IDA
            GeneID:55553 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
            GeneID:55553 -> Cellular component: GO:0005634 [nucleus] evidence: NAS

by @meso_cacase at DBCLS
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