GGRNA Home | Help | Advanced search

2024-03-29 08:19:45, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_033229               2241 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens tripartite motif containing 15 (TRIM15), mRNA.
ACCESSION   NM_033229
VERSION     NM_033229.2  GI:149193330
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   McElroy,J.P., Cree,B.A., Caillier,S.J., Gregersen,P.K., Herbert,J.,
            Khan,O.A., Freudenberg,J., Lee,A., Bridges,S.L. Jr., Hauser,S.L.,
            Oksenberg,J.R. and Gourraud,P.A.
  TITLE     Refining the association of MHC with multiple sclerosis in African
            Americans
  JOURNAL   Hum. Mol. Genet. 19 (15), 3080-3088 (2010)
   PUBMED   20466734
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Barcellos,L.F., May,S.L., Ramsay,P.P., Quach,H.L., Lane,J.A.,
            Nititham,J., Noble,J.A., Taylor,K.E., Quach,D.L., Chung,S.A.,
            Kelly,J.A., Moser,K.L., Behrens,T.W., Seldin,M.F., Thomson,G.,
            Harley,J.B., Gaffney,P.M. and Criswell,L.A.
  TITLE     High-density SNP screening of the major histocompatibility complex
            in systemic lupus erythematosus demonstrates strong evidence for
            independent susceptibility regions
  JOURNAL   PLoS Genet. 5 (10), E1000696 (2009)
   PUBMED   19851445
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
REFERENCE   3  (bases 1 to 2241)
  AUTHORS   Uchil,P.D., Quinlan,B.D., Chan,W.T., Luna,J.M. and Mothes,W.
  TITLE     TRIM E3 ligases interfere with early and late stages of the
            retroviral life cycle
  JOURNAL   PLoS Pathog. 4 (2), E16 (2008)
   PUBMED   18248090
  REMARK    GeneRIF: Downregulation of TRIM11 and TRIM15 enhanced virus release
            suggesting that these proteins contribute to the endogenous
            restriction of retroviruses in cells.
REFERENCE   4  (bases 1 to 2241)
  AUTHORS   Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z.,
            Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S.,
            McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J.,
            Dunham,I., Hill,D.E. and Vidal,M.
  TITLE     hORFeome v3.1: a resource of human open reading frames representing
            over 10,000 human genes
  JOURNAL   Genomics 89 (3), 307-315 (2007)
   PUBMED   17207965
REFERENCE   5  (bases 1 to 2241)
  AUTHORS   Shiina,T., Ota,M., Shimizu,S., Katsuyama,Y., Hashimoto,N.,
            Takasu,M., Anzai,T., Kulski,J.K., Kikkawa,E., Naruse,T., Kimura,N.,
            Yanagiya,K., Watanabe,A., Hosomichi,K., Kohara,S., Iwamoto,C.,
            Umehara,Y., Meyer,A., Wanner,V., Sano,K., Macquin,C., Ikeo,K.,
            Tokunaga,K., Gojobori,T., Inoko,H. and Bahram,S.
  TITLE     Rapid evolution of major histocompatibility complex class I genes
            in primates generates new disease alleles in humans via hitchhiking
            diversity
  JOURNAL   Genetics 173 (3), 1555-1570 (2006)
   PUBMED   16702430
REFERENCE   6  (bases 1 to 2241)
  AUTHORS   Reymond,A., Meroni,G., Fantozzi,A., Merla,G., Cairo,S., Luzi,L.,
            Riganelli,D., Zanaria,E., Messali,S., Cainarca,S., Guffanti,A.,
            Minucci,S., Pelicci,P.G. and Ballabio,A.
  TITLE     The tripartite motif family identifies cell compartments
  JOURNAL   EMBO J. 20 (9), 2140-2151 (2001)
   PUBMED   11331580
REFERENCE   7  (bases 1 to 2241)
  AUTHORS   Harada,H., Harada,Y., O'Brien,D.P., Rice,D.S., Naeve,C.W. and
            Downing,J.R.
  TITLE     HERF1, a novel hematopoiesis-specific RING finger protein, is
            required for terminal differentiation of erythroid cells
  JOURNAL   Mol. Cell. Biol. 19 (5), 3808-3815 (1999)
   PUBMED   10207104
REFERENCE   8  (bases 1 to 2241)
  AUTHORS   Gruen,J.R., Nalabolu,S.R., Chu,T.W., Bowlus,C., Fan,W.F.,
            Goei,V.L., Wei,H., Sivakamasundari,R., Liu,Y., Xu,H.X., Parimoo,S.,
            Nallur,G., Ajioka,R., Shukla,H., Bray-Ward,P., Pan,J. and
            Weissman,S.M.
  TITLE     A transcription map of the major histocompatibility complex (MHC)
            class I region
  JOURNAL   Genomics 36 (1), 70-85 (1996)
   PUBMED   8812418
REFERENCE   9  (bases 1 to 2241)
  AUTHORS   Goei,V.L., Parimoo,S., Capossela,A., Chu,T.W. and Gruen,J.R.
  TITLE     Isolation of novel non-HLA gene fragments from the hemochromatosis
            region (6p21.3) by cDNA hybridization selection
  JOURNAL   Am. J. Hum. Genet. 54 (2), 244-251 (1994)
   PUBMED   8304341
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from BP270476.1, AL669914.2,
            BC038585.1, U34249.1 and AI739162.1.
            On Jun 20, 2007 this sequence version replaced gi:15100169.
            
            Summary: The protein encoded by this gene is a member of the
            tripartite motif (TRIM) family. The TRIM motif includes three
            zinc-binding domains, a RING, a B-box type 1 and a B-box type 2,
            and a coiled-coil region. The protein localizes to the cytoplasm.
            Alternatively spliced transcript variants have been described, but
            their biological validity has not been determined. [provided by
            RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: U34249.1, AK290280.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025084, ERS025088 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-366               BP270476.1         1-366
            367-367             AL669914.2         158205-158205
            368-399             BP270476.1         368-399
            400-1449            BC038585.1         1-1050
            1450-2092           U34249.1           1464-2106
            2093-2220           AI739162.1         1-128               c
            2221-2241           U34249.1           2235-2255
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6p21.3"
     gene            1..2241
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="tripartite motif containing 15"
                     /db_xref="GeneID:89870"
                     /db_xref="HGNC:16284"
     exon            1..860
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       141
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:17188113"
     variation       181
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:367652914"
     variation       237
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:371744467"
     variation       238
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:189105911"
     variation       295
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372667978"
     variation       314
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:146207681"
     variation       336..337
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace=""
                     /replace="ctct"
                     /db_xref="dbSNP:200720900"
     variation       348..349
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace=""
                     /replace="ctct"
                     /db_xref="dbSNP:368841242"
     variation       349
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:62407492"
     variation       349
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="ctctttctctctctctgtctctc"
                     /replace="t"
                     /db_xref="dbSNP:369656818"
     variation       367
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:9261536"
     variation       367
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="ctctctctctctgtctctc"
                     /replace="t"
                     /db_xref="dbSNP:369834849"
     misc_feature    441..443
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="upstream in-frame stop codon"
     variation       447
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:376378714"
     CDS             480..1877
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="zinc finger protein 178; tripartite
                     motif-containing 15; RING finger protein 93; zinc finger
                     protein B7"
                     /codon_start=1
                     /product="tripartite motif-containing protein 15"
                     /protein_id="NP_150232.2"
                     /db_xref="GI:149193331"
                     /db_xref="CCDS:CCDS4677.1"
                     /db_xref="GeneID:89870"
                     /db_xref="HGNC:16284"
                     /translation="
MPATPSLKVVHELPACTLCAGPLEDAVTIPCGHTFCRLCLPALSQMGAQSSGKILLCPLCQEEEQAETPMAPVPLGPLGETYCEEHGEKIYFFCENDAEFLCVFCREGPTHQAHTVGFLDEAIQPYRDRLRSRLEALSTERDEIEDVKCQEDQKLQVLLTQIESKKHQVETAFERLQQELEQQRCLLLARLRELEQQIWKERDEYITKVSEEVTRLGAQVKELEEKCQQPASELLQDVRVNQSRCEMKTFVSPEAISPDLVKKIRDFHRKILTLPEMMRMFSENLAHHLEIDSGVITLDPQTASRSLVLSEDRKSVRYTRQKKSLPDSPLRFDGLPAVLGFPGFSSGRHRWQVDLQLGDGGGCTVGVAGEGVRRKGEMGLSAEDGVWAVIISHQQCWASTSPGTDLPLSEIPRGVRVALDYEAGQVTLHNAQTQEPIFTFTASFSGKVFPFFAVWKKGSCLTLKG
"
     misc_feature    525..668
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="RING-finger (Really Interesting New Gene) domain, a
                     specialized type of Zn-finger of 40 to 60 residues that
                     binds two atoms of zinc; defined by the 'cross-brace'
                     motif C-X2-C-X(9-39)-C-X(1-3)-
                     H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved
                     in...; Region: RING; cd00162"
                     /db_xref="CDD:29102"
     misc_feature    order(525..527,534..536,570..572,576..578,585..587,
                     594..596,648..650,657..659)
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:29102"
     misc_feature    720..836
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="B-Box-type zinc finger; zinc binding domain
                     (CHC3H2); often present in combination with other motifs,
                     like RING zinc finger, NHL motif, coiled-coil or RFP
                     domain in functionally unrelated proteins, most likely
                     mediating protein-protein interaction; Region: BBOX;
                     cd00021"
                     /db_xref="CDD:28905"
     misc_feature    order(726..728,735..737,792..794,810..812)
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="Zn2+ binding site [ion binding]; other site"
                     /db_xref="CDD:28905"
     misc_feature    1365..1511
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="SPRY-associated domain; Region: PRY; pfam13765"
                     /db_xref="CDD:205938"
     misc_feature    1515..1859
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /note="Domain in SPla and the RYanodine Receptor; Region:
                     SPRY; smart00449"
                     /db_xref="CDD:128725"
     variation       486
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201508191"
     variation       501
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143628773"
     variation       521
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:35278640"
     variation       533
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2523733"
     variation       541
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:373721924"
     variation       542
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144796171"
     variation       545
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:11961941"
     variation       561
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368737286"
     variation       564
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17194460"
     variation       603
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17194467"
     variation       611
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:372226825"
     variation       632
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:138173429"
     variation       699
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200404814"
     variation       729
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:17194474"
     variation       761
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143039782"
     variation       803..804
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:2857452"
     variation       804
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2523732"
     variation       805
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144365165"
     exon            861..956
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       864
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:373372000"
     variation       865
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:376718713"
     variation       868
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:201369873"
     variation       873
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:139358870"
     variation       877
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143173321"
     variation       895
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:56866777"
     variation       917
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:140385648"
     exon            957..1187
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       963
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:61746149"
     variation       1012
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:113222785"
     variation       1020
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:113787537"
     variation       1028
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150718462"
     variation       1030
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:61738774"
     variation       1098
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:369181343"
     variation       1110
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149881430"
     variation       1123
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:182100536"
     variation       1182
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:34823152"
     exon            1188..1210
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       1206
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370109967"
     variation       1208
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:141139052"
     exon            1211..1326
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       1223
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377477000"
     variation       1225
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:371160070"
     variation       1226
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:61744342"
     variation       1255
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:113942323"
     variation       1259
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374562707"
     variation       1288
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:115839038"
     exon            1327..1359
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     exon            1360..2224
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /inference="alignment:Splign:1.39.8"
     variation       1381
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201819032"
     variation       1450
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:929156"
     variation       1451
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143734427"
     variation       1471
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:199747350"
     variation       1491
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375119144"
     variation       1545
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200479072"
     variation       1589
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:191507786"
     variation       1608
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:71561356"
     variation       1667
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:375289482"
     variation       1722
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:115649931"
     variation       1766
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:142991113"
     variation       1792
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1063276"
     variation       1808
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1063277"
     variation       1812
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:1063278"
     variation       1820
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:1063279"
     variation       1918
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150264994"
     variation       1923
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369877929"
     variation       1933
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370143829"
     variation       2031..2034
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace=""
                     /replace="ttat"
                     /db_xref="dbSNP:371041335"
     variation       2093
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1063280"
     variation       2116
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138979251"
     variation       2161
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149454547"
     polyA_signal    2196..2201
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
     variation       2205
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:375616592"
     polyA_site      2224
                     /gene="TRIM15"
                     /gene_synonym="RNF93; ZNF178; ZNFB7"
ORIGIN      
actttgatgctgtgggcacgcctcagagccagaagtttatggctcccacctgctcaatctgacaggaagcttctgctccccagttctccccagccactgtggtctacagattccaggaaacccatccccctgtgacctcatggtgtgctctgttctccaccctagggaccagaaggagccaggagtaaagaactggcttacttggccgccactgggaaattctgggtaattcgagacgccctggaatttggacccactccgctgataggtggtggccagggttctagggaacacaagaggcggagccaggtggcttccctgtgctggcattcttgcctctctctctctttctctctctctgtctcttagccttgcagccgtttccctctgcgattcatgtaagtgtgactcgatttcagggaaagggaactcgcgtgggctgaggagaccggagtggacgggctggggaaggcaccgtgatgcccgcaaccccgtccctgaaggtggtccatgagctgcctgcctgtaccctctgtgcggggccgctggaggatgcggtgaccattccctgtggacacaccttctgccggctctgcctccccgcgctctcccagatgggggcccaatcctcgggcaagatcctgctctgcccgctctgccaagaggaggagcaggcagagactcccatggcccctgtgcccctgggcccgctgggagaaacttactgcgaggagcacggcgagaagatctacttcttctgcgagaacgatgccgagttcctctgtgtgttctgcagggagggtcccacgcaccaggcgcacaccgtggggttcctggacgaggccattcagccctaccgggatcgtctcaggagtcgactggaagctctgagcacggagagagatgagattgaggatgtaaagtgtcaagaagaccagaagcttcaagtgctgctgactcagatcgaaagcaagaagcatcaggtggaaacagcttttgagaggctgcagcaggagctggagcagcagcgatgtctcctgctggccaggctgagggagctggagcagcagatttggaaggagagggatgaatatatcacaaaggtctctgaggaagtcacccggcttggagcccaggtcaaggagctggaggagaagtgtcagcagccagcaagtgagcttctacaagatgtcagagtcaaccagagcaggtgtgagatgaagacttttgtgagtcctgaggccatttctcctgaccttgtcaagaagatccgtgatttccacaggaaaatactcaccctcccagagatgatgaggatgttctcagaaaacttggcgcatcatctggaaatagattcaggggtcatcactctggaccctcagaccgccagccggagcctggttctctcggaagacaggaagtcagtgaggtacacccggcagaagaagagcctgccagacagccccctgcgcttcgacggcctcccggcggttctgggcttcccgggcttctcctccgggcgccaccgctggcaggttgacctgcagctgggcgacggcggcggctgcacggtgggggtggccggggagggggtgaggaggaagggagagatgggactcagcgccgaggacggcgtctgggccgtgatcatctcgcaccagcagtgctgggccagcacctccccgggcaccgacctgccgctgagcgagatcccgcgcggcgtgagagtcgccctggactacgaggcggggcaggtgaccctccacaacgcccagacccaggagcccatcttcaccttcactgcctctttctccggcaaagtcttccctttctttgccgtctggaaaaaaggttcctgccttacgctgaaaggctgaagtggggcgcgcgaagggcggcgaagcggagacggcggctctccgggatccagctccgcccctggccagtgtgcggcccgggggctccctgtgcccgcgtgaggcgagagaacaggggacttgagtctcgaacagcggttgtttttactttatttatcttaggccctcagctccctgacgtcctgagcctccctgtgacgctctggccttctctgtacctcagagtgcagaaccacagacggcttcggctgtgcctagggcaacagccaacctaggagccagcgggctttcggggaaaaaaaagaaaaagacatctaaaataaaatgtttaaactgtttcaaaataaaaaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:89870 -> Molecular function: GO:0008270 [zinc ion binding] evidence: IEA
            GeneID:89870 -> Biological process: GO:0007500 [mesodermal cell fate determination] evidence: TAS
            GeneID:89870 -> Cellular component: GO:0005622 [intracellular] evidence: IEA

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.