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2024-04-26 08:05:10, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_032300 3172 bp mRNA linear PRI 15-JUN-2013
DEFINITION Homo sapiens trichoplein, keratin filament binding (TCHP),
transcript variant 1, mRNA.
ACCESSION NM_032300
VERSION NM_032300.4 GI:219803733
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3172)
AUTHORS Luykx,J.J., Bakker,S.C., Lentjes,E., Neeleman,M., Strengman,E.,
Mentink,L., Deyoung,J., de Jong,S., Sul,J.H., Eskin,E., van
Eijk,K., van Setten,J., Buizer-Voskamp,J.E., Cantor,R.M., Lu,A.,
van Amerongen,M., van Dongen,E.P., Keijzers,P., Kappen,T.,
Borgdorff,P., Bruins,P., Derks,E.M., Kahn,R.S. and Ophoff,R.A.
TITLE Genome-wide association study of monoamine metabolite levels in
human cerebrospinal fluid
JOURNAL Mol. Psychiatry (2013) In press
PUBMED 23319000
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 3172)
AUTHORS Ibi,M., Zou,P., Inoko,A., Shiromizu,T., Matsuyama,M., Hayashi,Y.,
Enomoto,M., Mori,D., Hirotsune,S., Kiyono,T., Tsukita,S., Goto,H.
and Inagaki,M.
TITLE Trichoplein controls microtubule anchoring at the centrosome by
binding to Odf2 and ninein
JOURNAL J. Cell. Sci. 124 (PT 6), 857-864 (2011)
PUBMED 21325031
REMARK GeneRIF: Trichoplein controls microtubule anchoring at the
centrosome by binding to Odf2 and ninein.
REFERENCE 3 (bases 1 to 3172)
AUTHORS Cerqua,C., Anesti,V., Pyakurel,A., Liu,D., Naon,D., Wiche,G.,
Baffa,R., Dimmer,K.S. and Scorrano,L.
TITLE Trichoplein/mitostatin regulates endoplasmic reticulum-mitochondria
juxtaposition
JOURNAL EMBO Rep. 11 (11), 854-860 (2010)
PUBMED 20930847
REMARK GeneRIF: Trichoplein/mitostatin is a new regulator of
mitochondria-endoplasmic reticulum juxtaposition.
REFERENCE 4 (bases 1 to 3172)
AUTHORS Vecchione,A., Fassan,M., Anesti,V., Morrione,A., Goldoni,S.,
Baldassarre,G., Byrne,D., D'Arca,D., Palazzo,J.P., Lloyd,J.,
Scorrano,L., Gomella,L.G., Iozzo,R.V. and Baffa,R.
TITLE MITOSTATIN, a putative tumor suppressor on chromosome 12q24.1, is
downregulated in human bladder and breast cancer
JOURNAL Oncogene 28 (2), 257-269 (2009)
PUBMED 18931701
REMARK GeneRIF: MITOSTATIN was found within a 3.2-kb transcript for an
approximately 62 kDa mitochondrial protein with tumor suppressor
activity. It inhibits cell growth, is proapoptotic and
downregulates Hsp27.
REFERENCE 5 (bases 1 to 3172)
AUTHORS Tokumasu,F., Fairhurst,R.M., Ostera,G.R., Brittain,N.J., Hwang,J.,
Wellems,T.E. and Dvorak,J.A.
TITLE Band 3 modifications in Plasmodium falciparum-infected AA and CC
erythrocytes assayed by autocorrelation analysis using quantum dots
JOURNAL J. Cell. Sci. 118 (PT 5), 1091-1098 (2005)
PUBMED 15731014
REFERENCE 6 (bases 1 to 3172)
AUTHORS Nishizawa,M., Izawa,I., Inoko,A., Hayashi,Y., Nagata,K.,
Yokoyama,T., Usukura,J. and Inagaki,M.
TITLE Identification of trichoplein, a novel keratin filament-binding
protein
JOURNAL J. Cell. Sci. 118 (PT 5), 1081-1090 (2005)
PUBMED 15731013
REMARK GeneRIF: trichoplein is a keratin 8/18-binding protein that may be
involved in the organization of the apical network of keratin
filaments and desmosomes in simple epithelial cells
REFERENCE 7 (bases 1 to 3172)
AUTHORS Yu,J.Q., Zhuang,H., Xiu,Y., El-Haddad,G., Kumar,R. and Alavi,A.
TITLE Small urine leak after renal transplantation: detection by delayed
99mTc-DTPA renography--a case report
JOURNAL J Nucl Med Technol 33 (1), 31-33 (2005)
PUBMED 15731018
REFERENCE 8 (bases 1 to 3172)
AUTHORS Panzegrau,B., Gordon,L. and Goudy,G.H.
TITLE Outpatient therapeutic 131I for thyroid cancer
JOURNAL J Nucl Med Technol 33 (1), 28-30 (2005)
PUBMED 15731017
REFERENCE 9 (bases 1 to 3172)
AUTHORS Katanick,S.L.
CONSRTM Intersocietal Commission for the Accrediation of Nuclear Medicine
Laboratories
TITLE Fundamentals of ICANL accreditation
JOURNAL J Nucl Med Technol 33 (1), 19-23 (2005)
PUBMED 15731016
REFERENCE 10 (bases 1 to 3172)
AUTHORS Seibert,J.A. and Boone,J.M.
TITLE X-ray imaging physics for nuclear medicine technologists. Part 2:
X-ray interactions and image formation
JOURNAL J Nucl Med Technol 33 (1), 3-18 (2005)
PUBMED 15731015
REMARK Review article
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AY007230.1 and AK000079.1.
On Jan 8, 2009 this sequence version replaced gi:142382727.
Transcript Variant: This variant (1) represents the longer
transcript. Variants 1 and 2 both encode the same protein.
##Evidence-Data-START##
Transcript exon combination :: AY007230.1 [ECO:0000332]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-180 AY007230.1 1-180
181-3151 AY007230.1 182-3152
3152-3172 AK000079.1 537-557
FEATURES Location/Qualifiers
source 1..3172
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="12"
/map="12q24.11"
gene 1..3172
/gene="TCHP"
/gene_synonym="TpMs"
/note="trichoplein, keratin filament binding"
/db_xref="GeneID:84260"
/db_xref="HGNC:28135"
/db_xref="HPRD:14403"
/db_xref="MIM:612654"
exon 1..214
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
misc_feature 161..163
/gene="TCHP"
/gene_synonym="TpMs"
/note="upstream in-frame stop codon"
variation 204
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:61247504"
CDS 215..1711
/gene="TCHP"
/gene_synonym="TpMs"
/note="mitostatin; tumor suppressor protein; mitochondrial
protein with oncostatic activity"
/codon_start=1
/product="trichoplein keratin filament-binding protein"
/protein_id="NP_115676.1"
/db_xref="GI:14150056"
/db_xref="CCDS:CCDS9137.1"
/db_xref="GeneID:84260"
/db_xref="HGNC:28135"
/db_xref="HPRD:14403"
/db_xref="MIM:612654"
/translation="
MALPTLPSYWCSQQRLNQQLARQREQEARLRQQWEQNSRYFRMSDICSSKQAEWSSKTSYQRSMHAYQREKMKEEKRRSLEARREKLRQLMQEEQDLLARELEELRLSMNLQERRIREQHGKLKSAKEEQRKLIAEQLLYEHWKKNNPKLREMELDLHQKHVVNSWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDKLQAEALLQQMEELKLKEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAELGRFLRHQYNAQLSRRTQQIQEELEADRRILQALLEKEDESQRLHLARREQVMADVAWMKQAIEEQLQLERAREAELQMLLREEAKEMWEKREAEWARERSARDRLMSEVLTGRQQQIQEKIEQNRRAQEESLKHREQLIRNLEEVRELARREKEESEKLKSARKQELEAQVAERRLQAWEADQQEEEEEEEARRVEQLSDALLQQEAETMAEQGYRPKPYGHPKIAWN
"
misc_feature 431..1708
/gene="TCHP"
/gene_synonym="TpMs"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9BT92.1);
Region: Interaction with keratin proteins"
misc_feature 989..1489
/gene="TCHP"
/gene_synonym="TpMs"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9BT92.1);
Region: Trichohyalin/plectin homology domain"
exon 215..402
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 219
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:145451565"
variation 228
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:148814070"
variation 229
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:199913167"
variation 234
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:200993715"
variation 235
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:11539159"
variation 247
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:184702109"
variation 268
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:11615957"
variation 275
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:375945839"
variation 278
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:199775799"
variation 285
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:373497072"
variation 308
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:377471034"
variation 324
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="c"
/db_xref="dbSNP:200334528"
variation 330
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:370844769"
variation 344
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:202208566"
variation 398
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:373557911"
variation 399
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:375977597"
exon 403..613
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 442
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:202040061"
variation 461
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:201548733"
variation 486
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:144765573"
variation 491
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:200027650"
variation 532
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:138719299"
variation 537
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:200713074"
variation 574
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:140383594"
variation 594
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:10774978"
exon 614..670
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 620
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:372219544"
variation 633
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:149555348"
variation 634
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:144237003"
variation 645
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:199975433"
variation 655
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="c"
/db_xref="dbSNP:139102098"
variation 658
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:139923209"
variation 665
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:186211529"
variation 666
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:199860940"
variation 670
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:74416240"
exon 671..739
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 694
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:371039378"
variation 701
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:147510018"
exon 740..913
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 752
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:373115835"
variation 798
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:140118187"
variation 808
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:142930724"
variation 824
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:149507169"
variation 835
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:192394776"
variation 841
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:201972129"
variation 865
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:150684855"
variation 866
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:111431053"
variation 869
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:377730872"
variation 889
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:144756698"
exon 914..1026
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 915
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:149867465"
variation 921
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:141026601"
variation 928
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:140898875"
variation 957
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:143297503"
variation 962
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:200322531"
variation 963
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:74774614"
variation 978
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:78378786"
variation 981
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:76909214"
variation 986
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:146721398"
variation 995
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:142436521"
variation 1026
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:140322997"
exon 1027..1093
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1038
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:143927087"
variation 1051
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:143562682"
variation 1056
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:201307226"
variation 1068
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:367967992"
variation 1077
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:150998390"
variation 1078
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:202170610"
exon 1094..1266
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1119
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:185515212"
variation 1121
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:368484225"
variation 1126
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:377341846"
variation 1135
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:189930408"
variation 1136
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:201132176"
variation 1138
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:376133712"
variation 1165
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:200187202"
variation 1179
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:199750932"
variation 1183
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:140889513"
variation 1186
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:80217590"
variation 1233
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:150191186"
variation 1236
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:373850905"
exon 1267..1348
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1287
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:139087904"
variation 1319
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:143091693"
variation 1325
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:147052884"
variation 1328
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:200855746"
variation 1329
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:368644707"
variation 1330
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:138408335"
variation 1345
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:148581914"
exon 1349..1534
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1377
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:371270223"
variation 1378
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:144342640"
variation 1392
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:148794659"
variation 1396
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="c"
/db_xref="dbSNP:373009867"
variation 1397
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:141600308"
variation 1402
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:145932761"
variation 1408
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:200720472"
variation 1432
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:139831562"
variation 1463
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:16940680"
variation 1472
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:79799419"
variation 1476
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:139095320"
variation 1477
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:375988733"
variation 1478
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:149921078"
variation 1506
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:145032664"
variation 1509
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:375710026"
exon 1535..1678
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1545
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:149111537"
variation 1561
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:143201598"
variation 1601
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:372458088"
variation 1602
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:147853930"
variation 1604
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:201935991"
variation 1609
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:375438947"
variation 1645
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:368260508"
variation 1670
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:141514320"
variation 1671
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:376800013"
variation 1678
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:147036260"
exon 1679..3157
/gene="TCHP"
/gene_synonym="TpMs"
/inference="alignment:Splign:1.39.8"
variation 1680
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:138352827"
variation 1691
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:192103139"
variation 1722
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:201796711"
variation 1725
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:183112449"
variation 1755
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:370977423"
variation 1769
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:371507165"
variation 1806
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:79886630"
variation 1809
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:187402786"
variation 1819
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:17680262"
variation 1826
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:146125935"
variation 1863
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:140150392"
variation 1890
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:191871970"
variation 1919
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="c"
/db_xref="dbSNP:1045802"
variation 1982
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:112152670"
variation 2042
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:115197347"
variation 2124
/gene="TCHP"
/gene_synonym="TpMs"
/replace=""
/replace="a"
/db_xref="dbSNP:56268430"
variation 2197
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:371653953"
variation 2265..2266
/gene="TCHP"
/gene_synonym="TpMs"
/replace=""
/replace="g"
/db_xref="dbSNP:35636733"
variation 2284..2285
/gene="TCHP"
/gene_synonym="TpMs"
/replace=""
/replace="g"
/db_xref="dbSNP:34772666"
variation 2458
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:182668261"
variation 2468
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:143793004"
variation 2469
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:146702695"
variation 2714
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:117176903"
variation 2762
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:186945991"
variation 2848
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:56304404"
variation 2975
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:192354734"
variation 2980
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="t"
/db_xref="dbSNP:184252549"
variation 2987
/gene="TCHP"
/gene_synonym="TpMs"
/replace="g"
/replace="t"
/db_xref="dbSNP:76133847"
STS 3001..3152
/gene="TCHP"
/gene_synonym="TpMs"
/standard_name="STS-R42792"
/db_xref="UniSTS:67294"
variation 3009
/gene="TCHP"
/gene_synonym="TpMs"
/replace="c"
/replace="g"
/db_xref="dbSNP:142517442"
variation 3020
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="g"
/db_xref="dbSNP:150919850"
variation 3055
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:140889414"
variation 3136
/gene="TCHP"
/gene_synonym="TpMs"
/replace="a"
/replace="t"
/db_xref="dbSNP:77606151"
ORIGIN
gggcgcgagctcagggcgcctccggggtcctcactgcgctccccacgcgctgtgaccccatttgttgcacgtgcatgttcaggtcgagagagggatgcgacgtgttcggggagcagcccaccttgtgggtggccaatccgggacgggaatcttaaacttttaactcttggtgcaaagactgatccactggcggctttacgggagcgggaaaaaaatggcgctcccgacgctgccgtcctactggtgcagccagcagcgcctgaatcagcagctagcacgacagcgagagcaggaggcccggcttcggcagcagtgggagcagaacagccgttacttcaggatgtctgacatctgcagctccaaacaggcagaatggagctctaaaacctcctaccagcggagcatgcatgcctatcagcgggagaagatgaaggaggagaagaggaggagtctggaggcccgacgggaaaagctcaggcagctcatgcaggaggagcaggacctgctggccagagaactggaggagctgaggctgagcatgaacttgcaggaaagaagaatccgggagcagcacgggaagctgaaatcagccaaagaagagcagaggaaactgattgctgaacaacttttgtacgaacactggaaaaagaacaacccgaaacttcgagagatggagctggaccttcaccagaagcatgtcgtaaactcttgggaaatgcagaaagaagaaaaaaaacagcaagaagccaccgcagagcaagagaacaaacggtatgaaaatgaatatgaaagggcccgaagggaggcgctagaaaggatgaaagctgaagaggagaggaggcagctggaggacaagctccaggccgaggcactgctgcaacagatggaggagctgaagctgaaggaggtggaggcgaccaaactaaagaaggagcaggagaatctgttgaagcagcggtgggagctagagaggctggaggaagagcgaaagcagatggaagccttccggcagaaggcagagctggggcgtttcttgagacatcagtataacgctcaactcagcagacgcacacagcagatccaagaggagctggaggcagacaggcggatcctgcaggccctcctcgagaaggaggacgagagccagcgcctccacctggccaggcgggagcaggtcatggccgatgtggcctggatgaagcaggccattgaggagcagctgcagctggagcgggcgcgggaggcagagctgcagatgctgctgagggaggaggccaaggagatgtgggaaaagagagaggcagagtgggcccgagagcgcagcgcacgggacagactgatgagcgaggttctgacagggagacaacagcaaatacaagagaagattgagcagaaccgacgggcacaagaggaatccctgaaacacagggagcaacttattcgaaatcttgaggaggtgagagagttggctcgtcgcgagaaagaggagagtgaaaagctgaaatcggccaggaagcaggagctggaagcccaggttgcagagcgccggctgcaggcatgggaagcagaccagcaggaggaggaggaagaggaggaggcccggcgggtcgagcagctctcagatgccctgctgcagcaggaggcggagactatggctgagcagggctaccggcctaagccttacggacatccaaaaattgcttggaactgacttcatgggtaccataagtacagagaacaagggatgctgaggcttctgatcccagccgccaggcagttttacagggctctgttaacagtaagtgcccggggcactgtcagatggctcagcagtgcctgctcaggttcatcattgaaacatcccagtgtttggccagacattaaggtgtcgtgagagtccctttcatgcctttcttacccaagcaagggtctttgatgggcacgtgtttacagcgctgctgcatagtcttgtaatatattaacagtcacatcaactgaaggtcaatactaagagccacaggttgtacctgtgatggggcgtgtggtttcctgttgtctcacctttaattgtcaacctccagtgttgactctagaaatatgaggaaagcttttcagtttttaaaattgccatttaaatttagtctattaaaaacaaacctagaggtcttggtgcagttgatttcagagtttattaatttagtggtcccaaaagtattacatcttttatattctggaagaaaagaactgtgaacaaattagaaccccggaacactctgacgtccatggacgcattccagaaaagtggcaagagatgagtctttcctcctccaggaagcattttggtagaatttccatagagcattgtctgtgagtgactgatcccaacatgtatgttactaagccccaaaacgaacttcaaactgggtgtggtggcacgtgcctttagtcccagctacccgggaggctgcggcaagaggattgcttgagcccaggagttcgagtccaacctgggcaaaagagtgagaccccatctctaaaaccaaaaaggtaccttagaaggtcacctggttggctaaccttttaaaggcaggggcgtgacacgtaggacacattgggaatgtcttggctactacatgtagccttctgggatatatgtgcccagagggagaagcactgagcctgaagaaactagatgagtctcagaaccacagaccggccagaaatctctcccaccattatatcagcgtgatacaggtctacattcatttctacaaacaggaacaagttccttgcagcaataatattattttatgacttgtatttttactatacccttcctctgaggtttagttttcatcacattatgttcaagattccatatctccgtaaattacagctaattacagggcattgttccatggttattaaaaatcagagtttattaaaaatcctgagtcttaagggctgtcttacctttcacttccactgtcctgtagaaacagatcaagctgcaaaccacgtccttcatctgttgttcattttcttgcaactctttgactctgatcccctgagcagcacgttcatcacgcatgctctctgttgcgttccccatttcagatgtccagtaatggtgaaataaaatcctgcttcgacagcaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:84260 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:84260 -> Biological process: GO:0006915 [apoptotic process] evidence: IDA
GeneID:84260 -> Biological process: GO:0030308 [negative regulation of cell growth] evidence: IDA
GeneID:84260 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
GeneID:84260 -> Cellular component: GO:0005739 [mitochondrion] evidence: IDA
GeneID:84260 -> Cellular component: GO:0005813 [centrosome] evidence: IDA
GeneID:84260 -> Cellular component: GO:0005886 [plasma membrane] evidence: IDA
GeneID:84260 -> Cellular component: GO:0045095 [keratin filament] evidence: IDA
GeneID:84260 -> Cellular component: GO:0045179 [apical cortex] evidence: IDA
by
@meso_cacase at
DBCLS
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